WERAM Information

Tag Content
WERAM ID WERAM-Gam-0217
Ensembl Protein ID ENSGMOP00000020919.1
Gene Name hdac7b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGMOG00000019439.1 ENSGMOT00000021431.1 ENSGMOP00000020919.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.40e-97 326.9 411 701
HDAC Class-I 2.00e-18 67.2 547 663
Organism Gadus morhua
Domain Profile
  HDAC Class-II
           class-2.txt  53 katkeelqlvHseehvelletaeklekeeles...................ltvdsdsiylesksikaarlavGavlelvdkvlkgelk 122
                           + t+eelq+vHse+hv l++t+ +l++ +l+s                     +dsd+i++e+++++a+rla+G+v++l+ kv++gelk
  ENSGMOP00000020919.1 411 AFTLEELQSVHSETHVVLYGTN-PLNRFKLDSnklaxxxxxxxxxxxxxxxXXTDSDTIWNEMHTATASRLAAGCVTDLALKVAQGELK 498
                           5689******************.********99*****************999************************************ PP
           class-2.txt 123 ngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavd 211
                           ngfavvRPPGHHa++s++                              DvHhGnGtqe+fy+dp+vly+SlHRyd+g+ffp  gsg + 
  ENSGMOP00000020919.1 499 NGFAVVRPPGHHATHSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVHHGNGTQEAFYNDPNVLYISLHRYDNGNFFP--GSGGPA 585
                           ***********************99999999999999999999**************************************..****** PP
           class-2.txt 212 evgegkgegfnvNvawnggl...mgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggr 295
                           e+g +kgegfnvNvaw+ggl   mgd eylaafr+vv+pia+eF+Pd+vlvs+GfDa++g     gg++v+akc++ lt+ql++laggr
  ENSGMOP00000020919.1 586 EMGADKGEGFNVNVAWTGGLdppMGDVEYLAAFRTVVMPIAHEFSPDMVLVSSGFDAVQGhsPKQGGYKVSAKCFGFLTRQLMSLAGGR 674
                           ************************************************************8666899********************** PP
           class-2.txt 296 vvlvlEGGynlkaiaeaveavvkaLlg 322
                           vvl+lEGG++l+ai++a+ea+v++Llg
  ENSGMOP00000020919.1 675 VVLALEGGHDLTAICDASEACVSTLLG 701
                           *************************96 PP
  HDAC Class-I
           class-1.txt 168 dlhhGDgveeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavv 251
                           d+hhG+g +eafy+   v+ +s+h+y++ +ffPg+G   ++ga+kg  + vnv  + g+d    D +y + f++v+ ++ + f+P++v+
  ENSGMOP00000020919.1 547 DVHHGNGTQEAFYNDPNVLYISLHRYDNgNFFPGSGGPAEMGADKGEGFNVNVAWTGGLDppmgDVEYLAAFRTVVMPIAHEFSPDMVL 635
                           9*************************8746***********************998887655559************************ PP
           class-1.txt 252 lqcGaDslagD..rlgefnlsikghaec 277
                           +  G D+++g   + g +++s k ++  
  ENSGMOP00000020919.1 636 VSSGFDAVQGHspKQGGYKVSAKCFGFL 663
                           *******987522566677777666655 PP
Protein Sequence
(Fasta)		KPMDLRVSQR LVRPGLDANM LAPPHTLFLG HFSSEPFPRI SPSHVEYNHE PSPAEMDTRE 60
EIRQLMHKSK NEQSAVASPL VKQKLRERLM RKPDPDMPPK PKPSLSDQRQ NLGIRRTVSE 120
PTLKLKLKKH INTRQSPLQR KASAPPTVKH RTSSPNSSTS VSGCSSPNDS LLSDTGTRPL 180
LAHFSMASGS SGMPTITAGL PAQVSPLTVF VNSASHGLSS SQLRPHQLLL PSEGGGGGGG 240
TTPSHRPLIR TRSEPPPYSH SPLASPGLAE GPQHQRLLQQ YHNSLLLIPS EDMDLEETGS 300
GSGSGPGSLC GSEPGSLHLI YSCLSLLPPP PFPVCSRMRW EPHRQAVMRR PVAQLEPLAL 360
PVLMGPHQPP LRAQSSPAAT STPPALLAAL PLASPESPVK LRFTTGNMFK AFTLEELQSV 420
HSETHVVLYG TNPLNRFKLD SNKLAXXXXX XXXXXXXXXX XXTDSDTIWN EMHTATASRL 480
AAGCVTDLAL KVAQGELKNG FAVVRPPGHH ATHSAPXXXX XXXXXXXXXX XXXXXXXXXX 540
XXXXXXDVHH GNGTQEAFYN DPNVLYISLH RYDNGNFFPG SGGPAEMGAD KGEGFNVNVA 600
WTGGLDPPMG DVEYLAAFRT VVMPIAHEFS PDMVLVSSGF DAVQGHSPKQ GGYKVSAKCF 660
GFLTRQLMSL AGGRVVLALE GGHDLTAICD ASEACVSTLL GIEVVEPLPQ SVLDGRPCDN 720
AILSLQRVIQ VHGEYWQSVR SMAPTLELSH LQAQRVRPRR DSDSDPLNAM ASLSMGVRSP 780
H 781
Nucleotide Sequence
(Fasta)		AAGCCCATGG ACCTGAGGGT CTCCCAGAGG TTGGTGCGCC CGGGCCTCGA CGCCAACATG 60
CTGGCCCCCC CGCACACCTT GTTTCTAGGA CACTTCTCCT CCGAGCCGTT CCCCCGTATC 120
TCCCCCAGCC ATGTAGAGTA CAACCATGAG CCCAGTCCAG CAGAGATGGA CACCCGGGAG 180
GAGATCCGCC AGCTGATGCA CAAGAGTAAG AACGAGCAGA GTGCTGTTGC CAGTCCCCTT 240
GTGAAGCAGA AACTGCGAGA GCGACTGATG AGGAAGCCCG ATCCTGACAT GCCCCCGAAG 300
CCCAAGCCGT CACTGTCTGA CCAGCGGCAG AATCTGGGCA TACGCAGGAC AGTCTCGGAG 360
CCCACTCTGA AGTTGAAGCT GAAGAAGCAC ATCAACACCA GACAGAGCCC GCTGCAGCGC 420
AAGGCCAGCG CACCCCCGAC CGTCAAACAC AGGACATCCT CCCCAAACAG CAGCACATCA 480
GTGTCTGGCT GCAGCTCACC TAATGACAGC CTCTTATCTG ACACTGGGAC ACGCCCACTG 540
CTGGCCCACT TCTCCATGGC CTCCGGTTCA TCTGGGATGC CGACCATTAC CGCTGGGCTA 600
CCTGCACAGG TGAGCCCTCT AACAGTCTTT GTTAACTCTG CAAGTCATGG CCTGAGCTCC 660
AGCCAGCTCC GGCCTCACCA GCTGCTCCTC CCATCCGAGG GCGGAGGGGG AGGGGGAGGG 720
ACGACGCCCT CCCACAGGCC CCTGATCCGG ACGCGGTCTG AGCCCCCGCC CTACAGCCAC 780
TCCCCCCTGG CCTCCCCGGG GCTCGCAGAG GGCCCCCAGC ACCAGCGCCT GCTGCAGCAG 840
TACCACAACA GCCTGCTCCT GATCCCGTCC GAGGACATGG ACTTGGAGGA GACGGGCTCG 900
GGCTCCGGCT CCGGCCCGGG CTCGCTGTGC GGCTCGGAGC CCGGCTCGCT CCACTTAATA 960
TATTCCTGTC TGTCTTTACT TCCACCTCCT CCGTTCCCTG TGTGTTCCCG GATGCGGTGG 1020
GAACCCCACA GACAGGCGGT GATGCGCAGG CCGGTTGCTC AACTGGAGCC CCTGGCTTTG 1080
CCTGTCCTGA TGGGACCCCA CCAGCCCCCT CTCCGGGCCC AGTCCTCCCC CGCCGCTACC 1140
TCCACACCTC CAGCCCTGCT GGCAGCCCTG CCCCTGGCCA GCCCAGAGTC CCCCGTCAAG 1200
CTCCGCTTCA CCACCGGCAA TATGTTTAAG GCATTTACCC TGGAGGAGCT TCAGTCCGTC 1260
CACTCAGAGA CACACGTGGT TTTGTATGGA ACCAACCCCC TCAACCGCTT CAAACTGGAC 1320
AGCAACAAGC TTGCCGNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1380
NNNNNNACGG ACAGCGACAC GATCTGGAAC GAGATGCACA CGGCCACCGC CTCGCGGCTA 1440
GCGGCGGGCT GCGTGACGGA CCTGGCCCTG AAGGTGGCCC AAGGCGAGCT GAAGAATGGC 1500
TTTGCAGTTG TGAGGCCTCC TGGTCACCAT GCAACTCACT CCGCACCAAT NNNNNNNNNN 1560
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1620
NNNNNNNNNN NNNNNNNNGA TGTTCACCAT GGCAACGGAA CGCAGGAGGC TTTCTATAAC 1680
GACCCCAACG TACTTTACAT CTCCCTGCAT CGCTATGACA ACGGAAACTT CTTCCCGGGC 1740
AGCGGGGGTC CCGCGGAGAT GGGTGCAGAT AAGGGTGAGG GTTTCAACGT AAACGTGGCA 1800
TGGACCGGTG GACTGGATCC CCCGATGGGA GACGTGGAGT ACCTGGCTGC CTTCAGGACG 1860
GTGGTGATGC CCATCGCTCA TGAGTTCTCC CCTGATATGG TGCTGGTGTC GTCGGGCTTC 1920
GACGCCGTCC AGGGACACTC TCCGAAGCAG GGAGGGTACA AGGTGTCAGC CAAATGTTTT 1980
GGCTTCCTCA CCCGTCAGCT GATGTCCCTG GCGGGGGGTC GGGTGGTCCT AGCTCTGGAG 2040
GGGGGTCACG ACCTCACCGC CATTTGTGAC GCATCTGAAG CGTGTGTCAG TACCCTGCTG 2100
GGCATAGAGG TGGTGGAGCC CCTTCCCCAG TCTGTCCTTG ACGGGAGACC CTGTGACAAC 2160
GCCATCCTCT CCCTCCAGAG AGTCATCCAG GTCCACGGTG AGTACTGGCA GAGTGTGCGG 2220
TCCATGGCTC CCACACTGGA GCTGTCCCAC CTGCAGGCCC AGAGGGTGCG TCCGCGGCGG 2280
GACTCGGACA GCGACCCCCT CAACGCCATG GCCTCCCTCT CCATGGGGGT TCGCTCTCCA 2340
CAC 2344
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Gaa-0079 ENSGACP00000010554.1 Gasterosteus aculeatus 53 0.0 721
WERAM-Orn-0227 ENSONIP00000024390.1 Oreochromis niloticus 48 0.0 633
WERAM-Tar-0132 ENSTRUP00000028721.1 Takifugu rubripes 48 1e-176 617
WERAM-Leo-0044 ENSLOCP00000006280.1 Lepisosteus oculatus 42 2e-141 500
WERAM-Orla-0178 ENSORLP00000020522.1 Oryzias latipes 67 8e-135 478
WERAM-Dar-0240 ENSDARP00000132042.1 Danio rerio 65 7e-134 475
WERAM-Ten-0061 ENSTNIP00000000291.1 Tetraodon nigroviridis 63 1e-128 457
WERAM-Pof-0015 ENSPFOP00000001511.2 Poecilia formosa 64 3e-127 453
WERAM-Lac-0191 ENSLACP00000021749.1 Latimeria chalumnae 51 5e-127 452
WERAM-Xim-0225 ENSXMAP00000018758.1 Xiphophorus maculatus 63 3e-126 450
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 61 5e-126 449
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 60 5e-126 449
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 60 8e-126 448
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 60 2e-125 447
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 61 2e-125 447
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 61 3e-125 446
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 60 4e-125 446
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 60 4e-125 446
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 60 4e-125 446
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 60 5e-125 446
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 60 7e-125 445
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 60 8e-125 445
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 61 8e-125 445
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 61 1e-124 444
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 60 1e-124 444
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 60 3e-124 443
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 60 8e-124 442
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 60 4e-123 439
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 59 5e-123 439
WERAM-Xet-0073 ENSXETP00000023344.3 Xenopus tropicalis 61 5e-123 439
WERAM-Dan-0037 ENSDNOP00000003826.3 Dasypus novemcinctus 60 6e-123 439
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 59 8e-123 438
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 59 8e-123 438
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 59 1e-122 438
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 60 1e-122 438
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 59 2e-122 437
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 59 4e-122 436
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 59 1e-121 435
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 59 5e-121 432
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 57 4e-120 429
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 58 6e-120 429
WERAM-Caf-0149 ENSCAFP00000021172.4 Canis familiaris 57 6e-120 429
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 59 2e-119 427
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 58 2e-117 421
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 56 4e-117 419
WERAM-Mam-0095 ENSMMUP00000014626.2 Macaca mulatta 56 5e-117 419
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 56 7e-117 419
WERAM-Poa-0162 ENSPPYP00000019901.2 Pongo abelii 56 7e-117 419
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 56 8e-117 419
WERAM-Orc-0142 ENSOCUP00000012429.3 Oryctolagus cuniculus 56 1e-116 418
WERAM-Eqc-0174 ENSECAP00000019543.1 Equus caballus 58 2e-116 417
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 57 3e-116 416
WERAM-Dio-0163 ENSDORP00000015416.1 Dipodomys ordii 57 8e-116 415
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 57 1e-115 414
WERAM-Mae-0085 ENSMEUP00000008564.1 Macropus eugenii 58 2e-115 414
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 57 3e-115 413
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 57 7e-114 409
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 60 2e-111 400
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 55 9e-105 379
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 51 5e-100 363
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 54 5e-98 356
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 58 2e-97 354
WERAM-Ect-0068 ENSETEP00000007698.1 Echinops telfairi 57 3e-88 323
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 44 3e-80 297
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 41 1e-72 271
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 45 4e-69 260
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 50 1e-65 248
Created Date 25-Jun-2016