WERAM Information

Tag Content
WERAM ID WERAM-Xim-0085
Ensembl Protein ID ENSXMAP00000008038.1
Gene Name hdac4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSXMAG00000007976.1 ENSXMAT00000008048.1 ENSXMAP00000008038.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 6.30e-150 498.8 43 959
HDAC Class-I 2.70e-29 102.7 766 925
Organism Xiphophorus maculatus
Domain Profile
  HDAC Class-II
           class-2.txt 29 RiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeele 83
                           +q+ l +l++++ +++   +++ + ++e+l   H++++ e+++++++l   + +
  ENSXMAP00000008038.1 43 QLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLQEHIKQQQELLALKHQ 97
                          4444444455554444444555555555555555555555544444433322222 PP
           class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 
                           +glvyd+ m khq++++n+++hpE+++Riq+i+srlqe+gl+ ++e++++rka +eelq+vHse+hv l++t+    +++l+s      
  ENSXMAP00000008038.1 615 TGLVYDSLMQKHQCMCGNTNSHPEHAGRIQSIWSRLQETGLRAQCECIRGRKAALEELQTVHSEAHVLLYGTN--PLRQKLDSnptfpp 701
                           79***********************************************************************..5677788889**** PP
           class-2.txt  85 .................ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakll 156
                                            ++vdsd+i++e++s++aarlavG+v+elv+kv++gelkngfavvRPPGHHaeest+mGFC+fn+va+aakll
  ENSXMAP00000008038.1 702 rstgsitpmfvrlpcggVGVDSDTIWNEVHSSSAARLAVGSVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLL 790
                           ***************************************************************************************** PP
           class-2.txt 157 qqklkvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafr 242
                           qq+l+v+kilivDwDvHhGnGtq++fy+dp+vly+S+HRyd+g+ffp  gsga+devg+g+g+gfnvNva++ggl   mgd+eyl+afr
  ENSXMAP00000008038.1 791 QQRLSVSKILIVDWDVHHGNGTQQAFYDDPNVLYMSIHRYDDGNFFP--GSGAPDEVGSGPGVGFNVNVAFTGGLdppMGDSEYLTAFR 877
                           ***********************************************..**************************************** PP
           class-2.txt 243 evvlpiakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
                            vv+pia+eF+Pd+vlvs+GfDa+eg   plgg+++t kc+++lt+ql++laggrvvl+lEGG++l+ai++a+ea+v aLlg
  ENSXMAP00000008038.1 878 SVVMPIADEFAPDIVLVSSGFDAVEGhpPPLGGYTLTSKCFGYLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVAALLG 959
                           **************************9999**************************************************96 PP
  HDAC Class-I
           class-1.txt 131 lhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyya 216
                            hha  s   Gfcy n + +a   l++  + +++l +d d+hhG+g ++afy    v+ +s+h+y++ +ffPg+G  ++vg + g  + 
  ENSXMAP00000008038.1 766 GHHAEESTPMGFCYFNSVAIAAKLLQQrlSVSKILIVDWDVHHGNGTQQAFYDDPNVLYMSIHRYDDgNFFPGSGAPDEVGSGPGVGFN 854
                           4*******************987777645789*********************************9746******************** PP
           class-1.txt 217 vnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslagD..rlgefnlsikghaecvkfv 281
                           vnv ++ g+d    D++y + f+sv+ ++ + f P++v++  G D++ g   +lg + l+ k ++   + +
  ENSXMAP00000008038.1 855 VNVAFTGGLDppmgDSEYLTAFRSVVMPIADEFAPDIVLVSSGFDAVEGHppPLGGYTLTSKCFGYLTRQL 925
                           ****99998766669********************************9973369******99988765554 PP
Protein Sequence
(Fasta)		LSSSVDINSA LPLRLPPAAI PMDLRVDHHH QQQQQAASVR EQQLQQELLA LKQKQQIQRQ 60
ILIAEFQRQH EQLSRQHEAQ LQEHIKQQQE LLALKHQQEL LEHQRKMENH RLEQELEKQQ 120
REQKLQLLKN KERGQESAVA STEVKMRLQE FVLNKKKALA QRSLNQGGLP NDAPYWYRKT 180
QHSSLDQSSP PQTAVSTYNH PVLGVYNPRD DFPLRKTASE PNLKLRSRLK QKVSERRSSP 240
LLRRRDSPIT TAKKRSLDMA DSACSSAPGS GPSSPNNSSN NIPNENGITV SISNNMEASL 300
AQRLCGGGDQ GSINQLSLYT SPSLPNITLG LPATATATAA SNVTSAQDAG LQPALSLSPP 360
FLSGGHLSPY LADSGSGGHG AHSPLLQHMV LMEQSPAQSP LVTGEAESKN IYLSGVSGMS 420
MSSASMAKLQ RQHRPLGRTQ SAPLPQGSAA QAHAQALALF LFVSRWKQEF YTNSMMMGKP 480
GESPVGRQHQ SHPEETEEEL REHQDAGALP PGVTIKQEPP DPQELQELQE LQEEALQQHR 540
EREQELLFRQ QALLLEQQRI HQLRNYQASM EAAGMSMSFP GHRPLSRAQS SPASASSFPI 600
SVPTQDPPVK PRFTTGLVYD SLMQKHQCMC GNTNSHPEHA GRIQSIWSRL QETGLRAQCE 660
CIRGRKAALE ELQTVHSEAH VLLYGTNPLR QKLDSNPTFP PRSTGSITPM FVRLPCGGVG 720
VDSDTIWNEV HSSSAARLAV GSVVELVFKV ATGELKNGFA VVRPPGHHAE ESTPMGFCYF 780
NSVAIAAKLL QQRLSVSKIL IVDWDVHHGN GTQQAFYDDP NVLYMSIHRY DDGNFFPGSG 840
APDEVGSGPG VGFNVNVAFT GGLDPPMGDS EYLTAFRSVV MPIADEFAPD IVLVSSGFDA 900
VEGHPPPLGG YTLTSKCFGY LTRQLMTLAG GRVVLALEGG HDLTAICDAS EACVAALLGQ 960
ELDPLPKAVL EQRPNPNAVR SLERVIETHS KYWRSVHRYS SRLGLSLLEA KRGDSEEAEA 1020
VSAMASLSVA NTNTMDQSRT EEEPMEEEAP L 1051
Nucleotide Sequence
(Fasta)		CTCTCCTCTT CAGTGGACAT TAACTCTGCG CTGCCCCTGC GTCTGCCCCC TGCTGCCATC 60
CCCATGGACC TGCGCGTTGA TCACCACCAC CAGCAGCAGC AGCAGGCGGC CTCGGTGCGC 120
GAGCAGCAGC TGCAGCAGGA GCTGCTGGCT CTGAAGCAGA AGCAGCAGAT CCAGAGGCAG 180
ATCCTGATCG CCGAGTTCCA GCGGCAGCAC GAGCAGCTGT CCCGCCAGCA TGAGGCCCAG 240
CTCCAGGAGC ACATTAAGCA GCAACAGGAG CTGCTGGCCC TGAAGCACCA GCAGGAGCTG 300
CTGGAGCACC AGAGGAAGAT GGAGAACCAC CGGCTGGAGC AGGAACTGGA GAAGCAGCAG 360
AGGGAGCAGA AGCTGCAGCT GCTGAAGAAC AAGGAGCGGG GCCAGGAGAG TGCTGTGGCC 420
AGCACCGAGG TGAAGATGCG TCTGCAGGAG TTCGTCCTGA ACAAGAAGAA GGCGCTGGCC 480
CAGCGGAGCC TCAACCAGGG TGGCCTCCCC AACGACGCCC CCTACTGGTA CCGAAAAACC 540
CAACATAGCT CTCTGGACCA GAGCTCGCCT CCACAAACCG CAGTGTCCAC CTACAATCAC 600
CCGGTGCTGG GCGTCTACAA CCCTCGGGAT GACTTCCCAC TGCGAAAGAC CGCCTCGGAG 660
CCCAACCTGA AGCTGCGCTC CCGGCTGAAG CAGAAAGTGA GCGAGCGCCG CAGCAGCCCG 720
CTGCTCCGCC GCAGAGACAG TCCCATCACT ACGGCCAAGA AGCGCTCCCT CGACATGGCG 780
GACTCGGCAT GCAGCAGCGC CCCCGGCTCC GGCCCCAGCT CCCCGAACAA CAGCTCCAAC 840
AACATCCCCA ACGAGAACGG CATCACTGTG TCCATCTCCA ACAACATGGA GGCGTCTCTG 900
GCCCAGCGGC TGTGCGGCGG CGGCGATCAG GGCTCCATCA ACCAGCTGTC TCTCTACACC 960
TCGCCGTCCC TCCCCAACAT CACCCTGGGG CTGCCGGCCA CTGCCACCGC CACCGCCGCC 1020
TCCAACGTGA CTTCCGCTCA GGATGCAGGC CTGCAACCAG CCCTCTCCCT CAGCCCCCCC 1080
TTTCTGTCCG GCGGCCATTT GAGCCCCTAC CTTGCAGATA GCGGGTCCGG CGGCCACGGC 1140
GCTCACAGCC CCCTGCTGCA GCACATGGTT CTGATGGAGC AGAGTCCCGC TCAGAGCCCG 1200
CTGGTGACAG GTGAGGCCGA GTCAAAAAAT ATTTATCTCT CAGGCGTAAG CGGCATGTCC 1260
ATGTCATCGG CCTCCATGGC CAAGCTGCAG CGGCAGCACC GGCCCCTGGG GCGGACCCAG 1320
TCGGCGCCGC TGCCCCAGGG GAGCGCCGCC CAGGCCCACG CTCAGGCCCT GGCCCTATTT 1380
CTGTTTGTGA GTAGGTGGAA GCAGGAATTC TATACTAACT CTATGATGAT GGGGAAGCCT 1440
GGCGAGTCGC CCGTGGGGCG GCAGCACCAG AGCCACCCGG AGGAGACGGA GGAGGAGCTG 1500
AGGGAGCACC AGGACGCCGG GGCCTTGCCA CCGGGGGTCA CCATCAAGCA GGAGCCGCCG 1560
GACCCACAGG AGCTGCAAGA GCTGCAAGAG CTGCAGGAGG AGGCACTGCA GCAGCACCGC 1620
GAGCGGGAGC AGGAGCTGCT CTTCAGACAG CAGGCTCTGC TGTTGGAGCA GCAGCGGATC 1680
CACCAGCTGA GGAACTACCA GGCGTCCATG GAGGCTGCCG GCATGTCCAT GTCCTTCCCT 1740
GGACACAGAC CCCTGTCCAG GGCGCAGTCG TCTCCGGCCT CGGCGTCGTC CTTCCCCATC 1800
AGCGTCCCCA CGCAGGATCC TCCCGTCAAG CCTCGCTTCA CCACAGGCCT GGTGTATGAC 1860
TCCCTGATGC AGAAGCACCA GTGCATGTGT GGAAACACCA ACAGCCACCC GGAGCACGCC 1920
GGGCGCATCC AGAGCATCTG GTCCCGGCTG CAGGAGACCG GACTCCGAGC TCAGTGCGAG 1980
TGTATCCGTG GGAGGAAGGC CGCTCTGGAG GAGCTGCAGA CGGTCCACTC TGAAGCCCAC 2040
GTCCTGCTGT ACGGAACCAA CCCACTCCGG CAGAAACTCG ACTCTAATCC CACATTTCCT 2100
CCCCGATCAA CAGGTTCCAT AACGCCCATG TTCGTTCGGC TGCCGTGCGG AGGAGTGGGG 2160
GTGGACAGCG ACACCATCTG GAACGAGGTC CACTCGTCCA GCGCGGCTCG GCTCGCCGTC 2220
GGCTCCGTCG TGGAGCTGGT CTTCAAGGTG GCAACCGGAG AGCTAAAGAA CGGTTTTGCG 2280
GTGGTCCGCC CTCCTGGACA CCACGCCGAG GAAAGCACCC CCATGGGCTT CTGCTACTTC 2340
AACTCGGTGG CCATCGCGGC CAAACTGCTG CAGCAGAGAC TCAGCGTCAG TAAGATCCTC 2400
ATCGTGGACT GGGATGTTCA CCATGGCAAT GGCACCCAGC AGGCCTTCTA CGACGACCCT 2460
AATGTCCTCT ACATGTCTAT CCATCGCTAC GACGACGGCA ACTTTTTTCC AGGAAGTGGA 2520
GCACCCGATG AGGTGGGGAG CGGTCCAGGG GTGGGGTTTA ACGTCAACGT GGCCTTCACC 2580
GGAGGCCTGG ACCCCCCCAT GGGAGACTCA GAGTACCTGA CTGCCTTCAG GTCTGTGGTG 2640
ATGCCGATAG CCGACGAGTT CGCTCCAGAC ATCGTGCTGG TCTCCTCTGG CTTCGATGCC 2700
GTGGAAGGAC ACCCCCCACC GCTGGGCGGC TACACCCTGA CCTCCAAATG TTTTGGGTAT 2760
CTGACCAGAC AGCTGATGAC CCTCGCTGGA GGCCGGGTGG TCCTGGCGCT GGAGGGAGGT 2820
CACGACCTCA CTGCGATCTG TGATGCCTCT GAGGCCTGCG TGGCCGCCCT GCTTGGACAA 2880
GAGCTAGATC CGCTTCCAAA GGCCGTCCTG GAGCAGAGGC CCAACCCCAA CGCAGTGCGC 2940
TCTCTGGAGA GAGTCATAGA GACTCACAGT AAGTACTGGC GCTCGGTGCA TCGTTACTCA 3000
TCGCGGCTGG GACTCTCTCT GCTGGAGGCC AAGCGAGGCG ACTCGGAGGA GGCCGAGGCC 3060
GTTAGCGCCA TGGCGTCTCT GTCTGTAGCC AACACCAACA CAATGGATCA AAGCAGGACT 3120
GAGGAGGAGC CCATGGAGGA GGAGGCTCCG CTGTAA 3157
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pof-0042 ENSPFOP00000003781.2 Poecilia formosa 94 0.0 1433
WERAM-Tar-0171 ENSTRUP00000035900.1 Takifugu rubripes 84 0.0 1361
WERAM-Orn-0012 ENSONIP00000001222.1 Oreochromis niloticus 88 0.0 1361
WERAM-Ten-0099 ENSTNIP00000000138.1 Tetraodon nigroviridis 85 0.0 1348
WERAM-Gaa-0148 ENSGACP00000019223.1 Gasterosteus aculeatus 84 0.0 1269
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 74 0.0 1162
WERAM-Leo-0082 ENSLOCP00000011105.1 Lepisosteus oculatus 72 0.0 1122
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 71 0.0 1095
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 71 0.0 1091
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 71 0.0 1089
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 68 0.0 1087
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 70 0.0 1084
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 70 0.0 1083
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 70 0.0 1083
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 71 0.0 1083
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 71 0.0 1082
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 70 0.0 1082
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 70 0.0 1082
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 71 0.0 1082
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 71 0.0 1082
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 71 0.0 1078
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 71 0.0 1077
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 71 0.0 1075
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 70 0.0 1071
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 71 0.0 1071
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 70 0.0 1067
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 70 0.0 1063
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 69 0.0 1051
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 70 0.0 1045
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 66 0.0 1036
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 67 0.0 1032
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 67 0.0 1022
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 67 0.0 1021
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 67 0.0 1018
WERAM-Dan-0037 ENSDNOP00000003826.3 Dasypus novemcinctus 68 0.0 1015
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 63 0.0 996
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 69 0.0 995
WERAM-Poa-0116 ENSPPYP00000014905.2 Pongo abelii 66 0.0 979
WERAM-Mam-0041 ENSMMUP00000007984.2 Macaca mulatta 67 0.0 976
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 66 0.0 927
WERAM-Dio-0038 ENSDORP00000004330.1 Dipodomys ordii 60 0.0 831
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 71 0.0 790
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 72 0.0 784
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 80 0.0 739
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 84 0.0 720
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 74 0.0 657
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 68 0.0 645
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 74 0.0 633
WERAM-Eqc-0174 ENSECAP00000019543.1 Equus caballus 74 0.0 632
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 74 2e-180 630
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 74 2e-180 630
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 74 3e-180 629
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 73 2e-175 614
WERAM-Nol-0057 ENSNLEP00000006711.1 Nomascus leucogenys 72 2e-175 614
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 70 3e-173 607
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 71 7e-170 595
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 74 1e-166 585
WERAM-Mae-0085 ENSMEUP00000008564.1 Macropus eugenii 71 1e-165 581
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 65 3e-155 547
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 70 2e-148 524
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 59 3e-148 523
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 60 4e-137 486
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 74 1e-122 438
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 51 2e-121 434
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 51 5e-120 430
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 63 7e-116 416
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 57 8e-89 326
WERAM-Bro-0168 Bo9g014470.1 Brassica oleracea 43 2e-78 291
WERAM-Brr-0181 Bra035942.1-P Brassica rapa 43 2e-78 291
WERAM-Sem-0010 EFJ19764 Selaginella moellendorffii 46 3e-78 291
WERAM-Miv-0034 MVLG_04888T0 Microbotryum violaceum 40 5e-77 287
WERAM-Sol-0055 Solyc03g115150.2.1 Solanum lycopersicum 40 1e-76 285
Created Date 25-Jun-2016