WERAM Information

Tag Content
WERAM ID WERAM-Tar-0063
Ensembl Protein ID ENSTRUP00000012899.1
Gene Name hdac4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSTRUG00000005375.1 ENSTRUT00000012960.1 ENSTRUP00000012899.1
ENSTRUG00000005375.1 ENSTRUT00000012961.1 ENSTRUP00000012900.1
ENSTRUG00000005375.1 ENSTRUT00000012962.1 ENSTRUP00000012901.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 5.90e-147 490.3 652 991
HDAC Class-I 6.10e-28 99.5 798 953
Organism Takifugu rubripes
Domain Profile
  HDAC Class-II
           class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 
                           +glvyd+ m khq++++n++ hpE+++Riq+i+srlqe+gl+ ++e++++rka++eelq++Hse+hv l++t+    +++l+       
  ENSTRUP00000012899.1 652 TGLVYDSLMQKHQCMCGNTTIHPEHAGRIQSIWSRLQETGLRAHCECIRGRKASLEELQTIHSEAHVLLYGTNP--LRQKLDCkislss 738
                           79***********************************************************************4..3444444457799 PP
           class-2.txt  85 ............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk 161
                                       ++vdsd+i++e++s++aarlavG+v elv+kv++gelkngfavvRPPGHHaees++mGFC+fn+va+aakllqq+l+
  ENSTRUP00000012899.1 739 vspmfvrlpcggIGVDSDTIWNEVHSSTAARLAVGSVAELVFKVASGELKNGFAVVRPPGHHAEESAPMGFCYFNSVAIAAKLLQQRLS 827
                           ***************************************************************************************** PP
           class-2.txt 162 vkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlp 247
                           v+kilivDwDvHhGnGtq++fy dp +ly+SlHRyd+g+ffp  gsga+devg+g+g+gfnvN+a++ggl   mgd eylaafr+vv+p
  ENSTRUP00000012899.1 828 VRKILIVDWDVHHGNGTQQAFYADPGILYISLHRYDDGNFFP--GSGAPDEVGSGAGVGFNVNMAFTGGLeppMGDVEYLAAFRTVVMP 914
                           ******************************************..********************************************* PP
           class-2.txt 248 iakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
                           ia+eF+Pd+vlvs+GfDa++g  +plgg+++takc+++lt+ql++laggrvvl+lEGG++l+ai++a+ea+v+aLlg
  ENSTRUP00000012899.1 915 IANEFAPDVVLVSSGFDAVDGhaSPLGGYKLTAKCFGYLTRQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLG 991
                           *********************999***************************************************96 PP
  HDAC Class-I
           class-1.txt 131 lhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyya 216
                            hha  s   Gfcy n + +a   l++  + +++l +d d+hhG+g ++afy+   ++ +s+h+y++ +ffPg+G  ++vg + g  + 
  ENSTRUP00000012899.1 798 GHHAEESAPMGFCYFNSVAIAAKLLQQrlSVRKILIVDWDVHHGNGTQQAFYADPGILYISLHRYDDgNFFPGSGAPDEVGSGAGVGFN 886
                           4*******************987777645789*********************************9746******************** PP
           class-1.txt 217 vnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslag..Drlgefnlsikghaec 277
                           vn+ ++ g++    D +y + f++v+ ++ + f P++v++  G D++ g   +lg ++l+ k ++  
  ENSTRUP00000012899.1 887 VNMAFTGGLEppmgDVEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVDGhaSPLGGYKLTAKCFGYL 953
                           ***98888644444*********************************862258*******9988865 PP
Protein Sequence
(Fasta)		LSHFPVDVSA AALPMQVPPA ATAILPMDLR VDHHHNHQQQ PTFDHQEQQL QQELVALKHK 60
QQLQRQLLIA EFQRQHEQLS RQHEIQLQEH IKHQQDLLAL KHQQELLEHQ RKIEQQRHEQ 120
ELEKQQREYK LHQLKNKDRG QESAIASTEV KMRLQEFVLN KKKALAQRNL NHCLPSDPRY 180
WYGKTQHSSL DQSSPPQTAL SAYTHPMLGT YDSKDDFPLR KTASEPNLKL RSRLKQKVTE 240
RRSSPLLRRK DGPIPSAKKR SLDVADSACN SAPGSGPSSP NNSSSNIPSE NGITISSSPG 300
EASLLQRLAA REGSVSHLSL YTSPSLPNIT LGLPATGPAA SVVSGHKDGD SRLTLPALQQ 360
GIPLTSPFLP PTHLPSYLTS SALDREAPGG GAAGAHNPLL QHMVLLEQGH SPMVLTCLLF 420
GPFHNKSLGG LPLQSPSVSK LARGHRPLGR TQSAPLPQQQ CGQAQALQQL VVQQQHQQFL 480
EKHKQQFQQQ QHIISKIMSK PTDQVSAVSS SPSGPARQHQ SHPEETEEEL REHQGLPSSS 540
SPPTPSSLPV KEAGPMRSVV IKQEPVDPQE VEEKEQRERQ AEKDFLFRQQ QALLLEQQRI 600
HQLRNYQASM EAAGLPVSFA GHRPLSRAQS SPASASFPIV VPESTTKPRF TTGLVYDSLM 660
QKHQCMCGNT TIHPEHAGRI QSIWSRLQET GLRAHCECIR GRKASLEELQ TIHSEAHVLL 720
YGTNPLRQKL DCKISLSSVS PMFVRLPCGG IGVDSDTIWN EVHSSTAARL AVGSVAELVF 780
KVASGELKNG FAVVRPPGHH AEESAPMGFC YFNSVAIAAK LLQQRLSVRK ILIVDWDVHH 840
GNGTQQAFYA DPGILYISLH RYDDGNFFPG SGAPDEVGSG AGVGFNVNMA FTGGLEPPMG 900
DVEYLAAFRT VVMPIANEFA PDVVLVSSGF DAVDGHASPL GGYKLTAKCF GYLTRQLMGL 960
AGGRVVLALE GGHDLTAICD ASEACVSALL GNELEPIPDK LMQQRPNANA VRSMEKVLEA 1020
HGKYWCSLQR SASTLGCSLS EALQRDTEEA ETVSAMASLS VANKHMGKRS EEEPMEEETS 1080
Nucleotide Sequence
(Fasta)		TTGTCTCATT TTCCAGTGGA CGTGAGCGCA GCAGCACTGC CCATGCAGGT GCCCCCCGCA 60
GCTACAGCCA TCCTCCCCAT GGACCTGCGT GTAGACCACC ACCACAACCA CCAGCAGCAG 120
CCTACCTTCG ACCACCAGGA GCAGCAGCTG CAGCAGGAGC TGGTGGCTCT CAAACACAAG 180
CAGCAGCTGC AGAGACAGCT ACTGATCGCC GAGTTCCAGA GGCAGCACGA GCAGCTGTCG 240
CGCCAGCATG AGATCCAGCT GCAAGAGCAC ATCAAGCACC AACAGGACCT ACTAGCACTC 300
AAGCACCAAC AGGAGCTTCT GGAGCACCAG AGGAAGATTG AGCAGCAGCG TCATGAACAG 360
GAGCTGGAGA AGCAGCAGCG GGAATACAAA CTCCATCAGC TCAAGAACAA GGACAGGGGC 420
CAGGAGAGTG CCATCGCCAG TACGGAGGTT AAGATGCGAC TCCAGGAGTT TGTGCTGAAC 480
AAGAAGAAAG CCCTGGCTCA GCGAAACCTA AACCACTGTC TGCCCAGTGA CCCGCGCTAT 540
TGGTATGGAA AAACCCAGCA CAGCTCTCTG GACCAGAGCT CTCCTCCCCA AACAGCACTG 600
TCAGCATACA CCCACCCAAT GTTGGGCACG TACGACTCAA AAGATGACTT CCCTCTCCGC 660
AAAACAGCAT CTGAGCCCAA CCTGAAACTT CGCTCCCGGC TAAAGCAGAA GGTGACAGAG 720
CGCCGCAGTA GCCCTCTGCT TCGGAGGAAA GACGGTCCCA TTCCTTCTGC CAAGAAGCGC 780
TCGCTGGACG TTGCTGACTC TGCGTGCAAC AGTGCACCAG GCTCAGGTCC CAGCTCTCCC 840
AACAACAGCT CCAGTAACAT TCCCAGTGAG AACGGGATCA CCATTTCCAG CAGCCCCGGA 900
GAGGCCTCCC TGCTCCAGAG GCTGGCTGCG AGGGAAGGGT CAGTCAGCCA CCTCTCTCTC 960
TACACCTCCC CCTCTCTGCC CAACATCACC CTGGGATTGC CAGCCACCGG TCCTGCTGCT 1020
AGCGTGGTGT CGGGACACAA AGACGGTGAC AGTCGCCTGA CGTTACCTGC GCTGCAACAA 1080
GGAATTCCCC TCACCTCTCC CTTCCTCCCC CCCACCCACC TGCCCTCTTA TTTAACGTCC 1140
TCGGCTCTGG ACAGAGAGGC GCCCGGAGGG GGTGCTGCTG GCGCTCACAA CCCCCTCCTG 1200
CAACACATGG TACTGCTGGA GCAGGGTCAC AGTCCAATGG TCTTGACCTG TCTTCTGTTT 1260
GGACCCTTTC ATAATAAAAG CCTGGGAGGC CTCCCGCTAC AATCGCCTTC CGTCTCCAAA 1320
CTGGCACGAG GCCACCGTCC TCTGGGCAGA ACCCAGTCGG CCCCCCTGCC CCAGCAGCAG 1380
TGCGGCCAGG CCCAGGCCCT CCAGCAGCTG GTGGTCCAGC AGCAGCACCA GCAGTTTCTG 1440
GAAAAACACA AACAGCAGTT CCAACAGCAG CAGCACATCA TCAGCAAGAT CATGTCCAAG 1500
CCCACGGACC AGGTCTCAGC TGTGAGCTCC AGCCCATCAG GACCGGCCCG GCAACACCAG 1560
AGTCACCCAG AGGAAACGGA AGAGGAGCTG AGAGAGCACC AGGGGCTCCC CTCTTCCTCG 1620
TCGCCCCCAA CACCATCGTC ATTGCCTGTG AAGGAGGCGG GGCCAATGAG GAGCGTGGTG 1680
ATAAAACAAG AACCTGTGGA CCCACAGGAG GTGGAGGAGA AGGAGCAGAG GGAGAGACAG 1740
GCCGAGAAGG ACTTCCTCTT TAGACAGCAG CAGGCTCTGT TGTTGGAGCA GCAGCGGATC 1800
CACCAGTTGA GGAACTATCA GGCCTCTATG GAAGCAGCTG GGTTACCGGT CAGCTTCGCC 1860
GGCCACCGCC CCCTGTCCAG GGCCCAGTCT TCTCCAGCCT CCGCCTCCTT CCCCATCGTA 1920
GTGCCCGAGT CCACGACCAA GCCTCGATTT ACCACAGGTC TGGTCTACGA TTCTCTCATG 1980
CAGAAGCATC AGTGTATGTG TGGTAACACC ACCATTCATC CGGAGCACGC TGGCCGCATT 2040
CAGAGTATCT GGTCCCGGCT TCAGGAAACG GGTCTCAGGG CACACTGTGA GTGTATCCGT 2100
GGCAGAAAGG CTTCTCTGGA GGAGCTGCAG ACGATCCACT CTGAAGCCCA CGTCCTGCTG 2160
TACGGCACCA ACCCACTGCG GCAAAAACTT GACTGTAAGA TTTCATTAAG TTCAGTGAGT 2220
CCAATGTTTG TGAGGTTGCC ATGTGGAGGC ATAGGGGTGG ACAGTGACAC CATCTGGAAC 2280
GAAGTCCATT CGTCCACCGC GGCCCGTCTG GCGGTCGGTT CGGTGGCGGA GCTGGTTTTC 2340
AAAGTGGCAT CGGGCGAACT GAAGAACGGT TTCGCCGTCG TTCGACCGCC TGGACATCAC 2400
GCCGAGGAGA GTGCGCCAAT GGGGTTCTGT TACTTCAACT CGGTTGCCAT AGCGGCCAAG 2460
CTCCTGCAGC AGAGGCTCAG TGTCAGGAAA ATCCTCATTG TGGACTGGGA TGTTCACCAT 2520
GGCAATGGCA CCCAGCAGGC GTTCTACGCA GACCCTGGTA TTCTGTACAT TTCACTGCAC 2580
CGCTACGATG ATGGCAACTT CTTCCCTGGC AGTGGAGCGC CGGACGAGGT GGGCAGCGGA 2640
GCAGGTGTGG GCTTCAACGT GAACATGGCC TTTACGGGAG GACTGGAACC CCCCATGGGT 2700
GATGTAGAGT ACCTGGCTGC GTTTAGGACG GTGGTTATGC CGATTGCCAA CGAGTTTGCG 2760
CCGGACGTGG TTCTGGTGTC TTCGGGCTTT GACGCGGTGG ACGGCCATGC CTCGCCACTG 2820
GGAGGATACA AGCTAACAGC AAAATGCTTC GGCTACCTGA CCAGGCAGCT GATGGGTCTG 2880
GCAGGCGGGA GGGTGGTGCT CGCCCTGGAG GGCGGTCATG ACCTCACAGC CATATGCGAT 2940
GCCTCCGAAG CCTGCGTCTC TGCTCTGCTT GGCAATGAGT TGGAGCCAAT CCCCGACAAG 3000
CTGATGCAGC AGCGGCCGAA TGCTAACGCC GTCCGCTCCA TGGAGAAAGT TCTCGAAGCT 3060
CACGGTAAAT ACTGGTGCTC GCTGCAGCGC TCCGCCTCCA CGCTCGGTTG CTCCCTGAGC 3120
GAAGCGCTTC AGCGCGACAC AGAAGAAGCG GAAACCGTCT CTGCTATGGC CTCATTGTCT 3180
GTTGCCAACA AGCACATGGG AAAAAGATCC GAGGAGGAAC CGATGGAAGA AGAAACATCC 3240
TGA 3244
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ten-0103 ENSTNIP00000011743.1 Tetraodon nigroviridis 91 0.0 1614
WERAM-Orn-0049 ENSONIP00000005635.1 Oreochromis niloticus 82 0.0 1529
WERAM-Gaa-0020 ENSGACP00000002894.1 Gasterosteus aculeatus 84 0.0 1528
WERAM-Pof-0029 ENSPFOP00000001978.1 Poecilia formosa 81 0.0 1475
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 82 0.0 1474
WERAM-Xim-0022 ENSXMAP00000002092.1 Xiphophorus maculatus 82 0.0 1471
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 73 0.0 1385
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 72 0.0 1300
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 71 0.0 1294
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 70 0.0 1288
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 70 0.0 1286
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 70 0.0 1286
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 70 0.0 1285
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 70 0.0 1278
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 72 0.0 1276
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 70 0.0 1273
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 69 0.0 1273
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 70 0.0 1270
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 70 0.0 1269
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 70 0.0 1268
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 68 0.0 1264
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 67 0.0 1263
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 67 0.0 1251
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 70 0.0 1248
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 71 0.0 1239
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 69 0.0 1236
WERAM-Dan-0037 ENSDNOP00000003826.3 Dasypus novemcinctus 67 0.0 1209
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 67 0.0 1200
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 66 0.0 1196
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 68 0.0 1191
WERAM-Mam-0041 ENSMMUP00000007984.2 Macaca mulatta 67 0.0 1188
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 65 0.0 1187
WERAM-Poa-0116 ENSPPYP00000014905.2 Pongo abelii 67 0.0 1181
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 67 0.0 1174
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 72 0.0 1154
WERAM-Dio-0038 ENSDORP00000004330.1 Dipodomys ordii 61 0.0 1030
WERAM-Leo-0082 ENSLOCP00000011105.1 Lepisosteus oculatus 86 0.0 853
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 70 0.0 847
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 70 0.0 844
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 83 0.0 828
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 83 0.0 826
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 83 0.0 822
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 78 0.0 803
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 82 0.0 803
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 84 0.0 744
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 70 0.0 690
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 70 0.0 682
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 70 0.0 667
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 70 0.0 664
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 70 0.0 661
WERAM-Eqc-0174 ENSECAP00000019543.1 Equus caballus 70 0.0 660
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 70 0.0 659
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 68 0.0 650
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 68 0.0 645
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 68 0.0 640
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 67 3e-178 623
WERAM-Mae-0085 ENSMEUP00000008564.1 Macropus eugenii 66 6e-177 619
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 71 2e-172 603
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 65 1e-164 578
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 72 4e-156 550
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 58 3e-152 537
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 60 1e-142 505
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 69 7e-127 452
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 50 1e-124 445
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 52 2e-123 441
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 48 2e-113 408
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 53 1e-86 319
WERAM-Sem-0010 EFJ19764 Selaginella moellendorffii 42 3e-79 294
WERAM-Brr-0181 Bra035942.1-P Brassica rapa 42 3e-77 287
WERAM-Bro-0168 Bo9g014470.1 Brassica oleracea 42 4e-77 287
Created Date 25-Jun-2016