WERAM Information

Tag Content
WERAM ID WERAM-Cap-0214
Ensembl Protein ID ENSCPOP00000014276.1
Gene Name HDAC5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCPOG00000025458.1 ENSCPOT00000022523.1 ENSCPOP00000014276.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.50e-147 491 639 979
HDAC Class-I 9.60e-30 104.2 747 949
Organism Cavia porcellus
Domain Profile
  HDAC Class-II
           class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 
                           +g+vyd+ mlkhq++++n++ hpE+++Riq+i+srlqe+gll+k+e++++rkat++e+q+vHse h+ l++t+ +l++++l+s      
  ENSCPOP00000014276.1 639 TGVVYDTFMLKHQCVCGNTHVHPEHAGRIQSIWSRLQETGLLGKCERVRGRKATLDEIQTVHSELHTLLYGTS-PLNRQKLDSkkllgp 726
                           79**********************************************************************9.*************** PP
           class-2.txt  85 .............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqkl 160
                                        ++vdsd++++e++s++a+r+avG++lel++kv++gelkngfa++RPPGHHaeestamGFC+fn+va++akllqqkl
  ENSCPOP00000014276.1 727 isqkmyavlpcggIGVDSDTVWNEMHSSSAVRMAVGCLLELAFKVASGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKL 815
                           ***************************************************************************************** PP
           class-2.txt 161 kvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvl 246
                           +v ++livDwD+HhGnGtq++fy+dp+vly+SlHRyd+g+ffp  gsga++evg g+g+g+nvNvaw+gg+   +gd eylaafr+vv+
  ENSCPOP00000014276.1 816 SVGRVLIVDWDIHHGNGTQQAFYTDPSVLYISLHRYDNGNFFP--GSGAPEEVGGGPGVGYNVNVAWTGGVdppIGDVEYLAAFRTVVM 902
                           *******************************************..******************************************** PP
           class-2.txt 247 piakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLl 321
                           pia+eF+Pd+vlvsaGfDa+eg  +plgg+svta+c+++lt+ql++laggrvvl+lEGG++l+ai++a+ea+v+aLl
  ENSCPOP00000014276.1 903 PIAHEFAPDVVLVSAGFDAVEGhlSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 979
                           **********************99***************************************************98 PP
  HDAC Class-I
           class-1.txt  94 vfdglfeyc..qlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgve 176
                           v +++++ +  ++  G  le a k+ ++e +   ai    G hha  s a Gfc+ n + ++   l++  +  rvl +d d+hhG+g +
  ENSCPOP00000014276.1 747 VWNEMHSSSavRMAVGCLLELAFKVASGELKngFAIIRPPG-HHAEESTAMGFCFFNSVAITAKLLQQklSVGRVLIVDWDIHHGNGTQ 834
                           45555544311345677777777777665541145544444.*******************998888734567**************** PP
           class-1.txt 177 eafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDsla 260
                           +afyt   v+ +s+h+y++ +ffPg+G  ++vg + g  y vnv  + g+d    D +y + f++v+ ++ + f P++v++  G D++ 
  ENSCPOP00000014276.1 835 QAFYTDPSVLYISLHRYDNgNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDppigDVEYLAAFRTVVMPIAHEFAPDVVLVSAGFDAVE 923
                           *****************8746************************99997666669********************************8 PP
           class-1.txt 261 g..Drlgefnlsikghaecvkfvksf 284
                           g   +lg ++++ + +++  + + + 
  ENSCPOP00000014276.1 924 GhlSPLGGYSVTARCFGHLTRQLMTL 949
                           733589*****999999876655544 PP
Protein Sequence
(Fasta)		ETESTLSTDG APGREPSLEI LPRTSLHSIP VAVEVKPALP GTMPSTMGPG VRRGLPAGAV 60
EPVDPTDPVL LFAEFQKQHA HLTRQHEAQL QKHLQVGVGW PGPVLPCPAC CPYLLTPPPA 120
ASAQVVLRHK EKSKESAIAS TEVKLRLQEF LLSKSKEPTP GGLNHSLPQH PKCWGAHHAS 180
LDQSSPPQSG PPGTPPSYKL PLLGPYDSRD DFPLRKTASE PNLKVRSRLK QKVAERRSSP 240
LLRRKDGTVI STFKKRAVEI TGTSHGVSSV CNSAPGSGPS SPNSSHSTIA ENGFTGSVPN 300
IPTEMLPQHR APTLDSSPNQ FNLYSSPSLP NISLGLQPTV TVTNSHLTAS AKLTTQQEAE 360
RQALQSLQPG GSLTGKFLST SSIPGCLLGV ALEGDSGSHG HASLLQHVLL LEQARQQSTL 420
IAVPLHGQSP LVTGERMATS MRTVGKLPQH RPLSRTQSSP LPQSPQALQQ LVTQQQFLEK 480
QKQQQLQLGK ILTKTGELPR PPTTHPEETE EELTEQQEAL LVEEALTMPR EGSTESESTQ 540
EDLEEDDEDL EDEEDCYVQV QDPAGNSGSE EGPDLEEPST GYKKLFTDAP QLPPLRVYQA 600
PLSLATVPHQ ALGRTQSSPA APGGTRSPPD LPTKFLFTTG VVYDTFMLKH QCVCGNTHVH 660
PEHAGRIQSI WSRLQETGLL GKCERVRGRK ATLDEIQTVH SELHTLLYGT SPLNRQKLDS 720
KKLLGPISQK MYAVLPCGGI GVDSDTVWNE MHSSSAVRMA VGCLLELAFK VASGELKNGF 780
AIIRPPGHHA EESTAMGFCF FNSVAITAKL LQQKLSVGRV LIVDWDIHHG NGTQQAFYTD 840
PSVLYISLHR YDNGNFFPGS GAPEEVGGGP GVGYNVNVAW TGGVDPPIGD VEYLAAFRTV 900
VMPIAHEFAP DVVLVSAGFD AVEGHLSPLG GYSVTARCFG HLTRQLMTLA GGRVVLALEG 960
GHDLTAICDA SEACVSALLS VELQPLDEAI LQQKPNINAV ATLEKVIEIQ GKHWSCLQRF 1020
AAGLGRSLRE AQASEAEEAE TVSAMALLSV GAEQAQASTQ EHSPRPVEEP MEQEPAL 1077
Nucleotide Sequence
(Fasta)		GAGACGGAGT CCACTCTCTC CACAGATGGC GCGCCTGGCC GGGAGCCATC CCTGGAGATC 60
CTGCCACGGA CCTCACTGCA CAGCATCCCT GTGGCAGTAG AGGTGAAGCC GGCACTGCCT 120
GGGACCATGC CCAGTACCAT GGGCCCTGGG GTGCGGCGGG GGCTGCCGGC CGGGGCTGTG 180
GAGCCTGTGG ACCCCACAGA CCCCGTGCTT CTGTTCGCCG AGTTCCAGAA GCAGCATGCA 240
CACCTGACTC GGCAGCACGA GGCACAGCTG CAGAAACACC TGCAGGTGGG CGTGGGGTGG 300
CCAGGCCCTG TTCTGCCCTG CCCTGCTTGC TGCCCATACC TGCTCACGCC GCCTCCCGCT 360
GCCTCTGCCC AGGTGGTCCT GCGCCATAAG GAGAAGAGCA AAGAGAGTGC CATTGCCAGC 420
ACCGAGGTGA AGCTGCGGCT GCAGGAGTTC CTCCTGTCCA AGTCGAAGGA GCCCACGCCA 480
GGCGGCCTCA ACCATTCCCT CCCTCAGCAC CCCAAGTGCT GGGGAGCCCA CCACGCTTCT 540
TTGGACCAGA GCTCCCCTCC CCAGAGCGGC CCCCCCGGGA CACCTCCCTC CTACAAGCTG 600
CCTCTTCTGG GGCCGTACGA CAGCCGTGAT GATTTCCCCC TGCGCAAGAC AGCCTCAGAA 660
CCCAACCTGA AAGTGAGGTC AAGGCTAAAG CAGAAGGTAG CTGAGCGGAG AAGCAGCCCC 720
CTGCTGCGCC GCAAGGATGG GACTGTTATC AGCACCTTTA AGAAGAGAGC CGTGGAGATC 780
ACAGGCACCA GCCACGGGGT GTCATCCGTG TGTAACAGTG CACCTGGCTC TGGCCCCAGC 840
TCTCCCAACA GCTCCCACAG TACCATCGCT GAGAATGGCT TTACGGGCTC AGTCCCCAAC 900
ATCCCCACAG AGATGCTCCC CCAGCACCGG GCCCCCACCC TGGACAGCTC CCCCAACCAG 960
TTCAACCTCT ACTCATCTCC CTCTCTGCCC AACATTTCCC TTGGGCTGCA GCCCACAGTG 1020
ACCGTCACCA ACTCGCACCT CACAGCCTCC GCGAAGCTCA CGACGCAGCA GGAGGCCGAG 1080
AGGCAGGCCC TCCAGTCTCT GCAGCCTGGT GGCTCGCTGA CCGGCAAGTT CCTGAGCACC 1140
TCCTCCATCC CCGGCTGCCT CCTGGGTGTG GCGTTGGAGG GCGACTCGGG CTCCCACGGG 1200
CATGCGTCCC TGTTGCAGCA TGTGCTGCTC CTGGAGCAGG CCCGGCAGCA GAGCACCCTT 1260
ATTGCTGTGC CGCTTCATGG GCAGTCCCCC CTGGTAACCG GCGAGCGCAT GGCCACCAGC 1320
ATGCGGACAG TGGGGAAGCT GCCCCAACAC CGGCCACTAA GCCGCACACA GTCCTCGCCG 1380
CTGCCACAGA GTCCACAGGC ACTGCAGCAG CTTGTCACAC AGCAGCAGTT CTTGGAGAAG 1440
CAGAAGCAGC AGCAGCTGCA GCTGGGCAAG ATCCTCACTA AGACCGGGGA GCTGCCCAGG 1500
CCGCCCACCA CACACCCTGA GGAGACCGAG GAGGAGCTTA CGGAGCAGCA GGAGGCTTTG 1560
CTGGTTGAAG AGGCCCTGAC AATGCCCCGG GAGGGCTCCA CAGAGAGTGA GAGCACCCAG 1620
GAAGACTTGG AGGAGGATGA TGAGGATCTG GAGGATGAGG AGGACTGTTA TGTGCAGGTC 1680
CAGGACCCAG CAGGCAACAG TGGCTCCGAG GAGGGTCCCG ACCTGGAGGA GCCCAGCACT 1740
GGCTACAAAA AGCTCTTCAC AGATGCCCCG CAGCTGCCGC CCCTACGTGT GTATCAGGCG 1800
CCCCTCAGCC TGGCCACTGT ACCCCACCAG GCCCTGGGCC GCACCCAATC CTCGCCTGCT 1860
GCACCGGGTG GTACGAGGAG CCCCCCAGAT CTGCCCACCA AGTTTCTCTT TACCACTGGC 1920
GTGGTGTACG ACACCTTCAT GCTAAAGCAC CAGTGTGTGT GCGGGAACAC GCATGTCCAC 1980
CCCGAGCATG CCGGCCGCAT CCAGAGCATC TGGTCCAGGC TGCAGGAGAC TGGACTGCTG 2040
GGCAAGTGTG AGCGGGTCCG GGGCCGCAAG GCCACCCTGG ACGAGATTCA GACGGTGCAC 2100
TCAGAGCTGC ACACACTGCT GTACGGGACC AGCCCACTCA ACCGGCAGAA GCTAGACAGC 2160
AAGAAGCTGC TTGGCCCCAT CAGCCAGAAG ATGTATGCTG TGCTGCCTTG CGGGGGCATT 2220
GGGGTGGACA GCGACACTGT GTGGAACGAG ATGCACTCCT CGAGCGCTGT GCGCATGGCC 2280
GTGGGCTGCC TGCTGGAGCT GGCCTTCAAG GTGGCCTCAG GCGAGCTCAA GAATGGCTTT 2340
GCCATCATCC GACCCCCAGG ACACCATGCG GAGGAGTCCA CTGCCATGGG ATTCTGCTTT 2400
TTCAACTCAG TGGCCATCAC AGCCAAACTG CTGCAGCAGA AGCTGAGTGT GGGCAGGGTC 2460
CTCATTGTGG ACTGGGACAT CCACCACGGT AACGGCACGC AGCAGGCCTT CTACACTGAC 2520
CCTTCCGTGC TCTACATCTC GCTGCACCGC TATGACAACG GCAACTTCTT CCCGGGCTCC 2580
GGGGCTCCGG AGGAGGTTGG TGGGGGCCCC GGCGTGGGGT ACAATGTGAA CGTGGCCTGG 2640
ACTGGCGGCG TGGACCCTCC CATCGGGGAC GTGGAGTACC TGGCCGCCTT CAGAACAGTG 2700
GTCATGCCCA TCGCCCACGA GTTCGCTCCT GATGTGGTCC TGGTCTCCGC TGGCTTCGAC 2760
GCCGTGGAAG GACACTTGTC CCCGCTGGGT GGCTACTCTG TCACCGCCAG ATGCTTCGGC 2820
CACCTCACCA GGCAGCTGAT GACGTTGGCA GGGGGCCGAG TGGTACTGGC CCTGGAGGGG 2880
GGCCACGACT TGACGGCCAT CTGTGATGCC TCCGAGGCCT GCGTCTCTGC CCTGCTCAGT 2940
GTGGAGCTGC AGCCCTTGGA CGAGGCCATC CTGCAGCAGA AGCCCAACAT CAATGCAGTG 3000
GCCACACTGG AGAAGGTCAT CGAGATCCAG GGCAAACACT GGAGCTGCCT GCAGAGGTTC 3060
GCAGCAGGGC TGGGCCGTTC CCTGCGGGAG GCCCAGGCCA GTGAGGCAGA GGAGGCAGAG 3120
ACTGTGAGTG CCATGGCGCT GCTATCTGTG GGTGCCGAGC AGGCCCAGGC CTCGACCCAG 3180
GAGCACAGCC CCAGGCCGGT GGAGGAGCCC ATGGAGCAGG AGCCCGCCCT ATGA 3235
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ict-0187 ENSSTOP00000016795.1 Ictidomys tridecemlineatus 91 0.0 937
WERAM-Mum-0019 ENSMUSP00000102770.2 Mus musculus 90 0.0 929
WERAM-Sus-0129 ENSSSCP00000018401.2 Sus scrofa 90 0.0 920
WERAM-Caj-0108 ENSCJAP00000018977.1 Callithrix jacchus 90 0.0 918
WERAM-Bot-0149 ENSBTAP00000053450.2 Bos taurus 89 0.0 917
WERAM-Paa-0157 ENSPANP00000020771.1 Papio anubis 91 0.0 915
WERAM-Ova-0067 ENSOARP00000007394.1 Ovis aries 89 0.0 913
WERAM-Hos-0075 ENSP00000468004.1 Homo sapiens 90 0.0 911
WERAM-Otg-0108 ENSOGAP00000009396.2 Otolemur garnettii 90 0.0 910
WERAM-Poa-0072 ENSPPYP00000009379.1 Pongo abelii 90 0.0 909
WERAM-Mam-0051 ENSMMUP00000008945.2 Macaca mulatta 90 0.0 908
WERAM-Chs-0039 ENSCSAP00000014557.1 Chlorocebus sabaeus 90 0.0 908
WERAM-Fec-0025 ENSFCAP00000002029.3 Felis catus 90 0.0 907
WERAM-Dio-0163 ENSDORP00000015416.1 Dipodomys ordii 90 0.0 907
WERAM-Dan-0156 ENSDNOP00000017844.1 Dasypus novemcinctus 89 0.0 907
WERAM-Ran-0140 ENSRNOP00000052059.4 Rattus norvegicus 90 0.0 905
WERAM-Tut-0123 ENSTTRP00000009926.1 Tursiops truncatus 89 0.0 903
WERAM-Eqc-0174 ENSECAP00000019543.1 Equus caballus 89 0.0 902
WERAM-Caf-0149 ENSCAFP00000021172.4 Canis familiaris 89 0.0 901
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 90 0.0 901
WERAM-Myl-0072 ENSMLUP00000005848.2 Myotis lucifugus 88 0.0 900
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 89 0.0 897
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 89 0.0 895
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 89 0.0 895
WERAM-Aim-0213 ENSAMEP00000019373.1 Ailuropoda melanoleuca 89 0.0 894
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 87 0.0 880
WERAM-Nol-0057 ENSNLEP00000006711.1 Nomascus leucogenys 87 0.0 874
WERAM-Mup-0103 ENSMPUP00000009452.1 Mustela putorius furo 90 0.0 870
WERAM-Loa-0216 ENSLAFP00000022496.1 Loxodonta africana 86 0.0 865
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 92 0.0 844
WERAM-Mae-0145 ENSMEUP00000015025.1 Macropus eugenii 80 0.0 784
WERAM-Pes-0126 ENSPSIP00000015149.1 Pelodiscus sinensis 83 0.0 783
WERAM-Anc-0037 ENSACAP00000004435.3 Anolis carolinensis 82 0.0 779
WERAM-Dar-0170 ENSDARP00000100072.2 Danio rerio 77 0.0 733
WERAM-Leo-0130 ENSLOCP00000016135.1 Lepisosteus oculatus 82 0.0 728
WERAM-Lac-0155 ENSLACP00000018356.1 Latimeria chalumnae 70 0.0 684
WERAM-Xet-0027 ENSXETP00000007313.3 Xenopus tropicalis 74 0.0 683
WERAM-Orn-0072 ENSONIP00000007998.1 Oreochromis niloticus 74 0.0 682
WERAM-Sah-0166 ENSSHAP00000017733.1 Sarcophilus harrisii 87 0.0 680
WERAM-Gaa-0053 ENSGACP00000006953.1 Gasterosteus aculeatus 71 0.0 676
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 67 0.0 669
WERAM-Ten-0172 ENSTNIP00000017010.1 Tetraodon nigroviridis 71 0.0 668
WERAM-Xim-0214 ENSXMAP00000017502.1 Xiphophorus maculatus 69 0.0 667
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 67 0.0 667
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 67 0.0 667
WERAM-Tar-0138 ENSTRUP00000030067.1 Takifugu rubripes 72 0.0 665
WERAM-Pof-0205 ENSPFOP00000017061.2 Poecilia formosa 71 0.0 658
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 68 0.0 657
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 68 0.0 656
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 71 0.0 653
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 72 0.0 648
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 67 0.0 644
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 70 0.0 641
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 64 1e-178 624
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 70 3e-177 620
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 67 2e-172 604
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 69 4e-171 599
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 59 1e-158 558
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 65 1e-155 548
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 69 6e-148 523
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 59 4e-140 496
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 56 4e-135 480
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 62 5e-117 420
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 50 2e-115 415
WERAM-Tub-0129 ENSTBEP00000014362.1 Tupaia belangeri 51 1e-114 412
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 52 1e-107 388
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 57 3e-74 278
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 40 2e-70 265
WERAM-Php-0085 PP1S34_252V6.1 Physcomitrella patens 44 4e-68 257
Created Date 25-Jun-2016