WERAM Information


Tag Content
WERAM ID WERAM-Lac-0155
Ensembl Protein ID ENSLACP00000018356.1
Gene Name HDAC5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000016167.1 ENSLACT00000018489.1 ENSLACP00000018356.1
ENSLACG00000016167.1 ENSLACT00000018490.1 ENSLACP00000018357.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.80e-135 451.5 101 995
HDAC Class-I 2.20e-25 90.1 49 964
Organism Latimeria chalumnae
Domain Profile
  HDAC Class-II

           class-2.txt  23 hpEkp 27 
++ +p
ENSLACP00000018356.1 101 QIASP 105
22222 PP
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84
+g+vyd+ mlkhq++++n++ hpE+++Riq+i+srlqe+gll+k+e++++rkat++e+q+vHse+h+ l++t+ +l++++l+s
ENSLACP00000018356.1 653 TGIVYDTFMLKHQCTCGNTNDHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEHHTLLYGTS-PLNRQKLDSkkllgp 740
789*********************************************************************9.*************** PP
class-2.txt 85 .............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnv.avaakllqqk 159
++vdsd++++e++s++a+r+avG+v+el++kv++gelkngfavvRPPGHHaeesta +C+f + + k l+q+
ENSLACP00000018356.1 741 ltqkmyavlpcggIGVDSDTVWNEMHSSSAVRMAVGCVIELAFKVASGELKNGFAVVRPPGHHAEESTAIIYCYFKKKnHEMLKCLLQS 829
***************************************************************************8651678899**** PP
class-2.txt 160 lkvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevv 245
+v liv wD+HhGnGtq++fy+dp+vly+SlHRyd+g+ffp gsga++evg g+g+g++vNvaw+gg+ +gd eyl+afr+vv
ENSLACP00000018356.1 830 NTVCYYLIVSWDIHHGNGTQQAFYSDPNVLYISLHRYDDGNFFP--GSGAPEEVGAGAGVGYTVNVAWTGGVdppVGDVEYLTAFRTVV 916
********************************************..******************************************* PP
class-2.txt 246 lpiakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
+pia+eF+Pd+vlvsaGfDa+eg +plgg+svtakc+++ltkql+klaggrvvl+lEGG++l+ai++a+ea+v+aLlg
ENSLACP00000018356.1 917 MPIANEFSPDVVLVSAGFDAVEGhlSPLGGYSVTAKCFGYLTKQLMKLAGGRVVLALEGGHDLTAICDASEACVSALLG 995
***********************99****************************************************96 PP

  HDAC Class-I

           class-1.txt  30 theLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae....elskelkkfnvgedcPvfd 96 
++ L + +l+++l i+k +++ +++ll + ++ e+l++ ++ + + ++++ + f v + cP+ +
ENSLACP00000018356.1 49 VDPLFREQQLQHELLILKQQQQMQKQLLFAEFQKQHEHLTRQHEVQLQehikQIASPHQIFHVVYMCPLSS 119
45677778888888888888888887765555555555544443333311114445667788888888765 PP
class-1.txt 17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyief.....lkkvepenae.......elskelkkfnvgedc. 92
+++hp r++ + + + + gl k e+++ +ka+ +e++++hse++ + l++ + ++++ ++ l ++g d+
ENSLACP00000018356.1 671 TNDHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEHHTLLygtspLNRQKLDSKKllgpltqKMYAVLPCGGIGVDSd 759
56789999999999999999999999999999999999999999987643311111444444444455543322222233334566652 PP
class-1.txt 93 Pvfdglfeyc..qlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellkkhkrvly...ididlhhGDg 174
v +++++ + ++ G +e a k+ ++e + a+ G hha s a +cy +l+ l + + v y + d+hhG+g
ENSLACP00000018356.1 760 TVWNEMHSSSavRMAVGCVIELAFKVASGELKngFAVVRPPG-HHAEESTAIIYCYFKKKNHEMLKCLLQSNTVCYyliVSWDIHHGNG 847
47788876651156789999*****99988762255555554.****************99999999999999987666789******* PP
class-1.txt 175 veeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDs 258
++afy v+ +s+h+y++ +ffPg+G ++vga+ g y+vnv + g+d D +y + f++v+ ++ + f+P++v++ G D+
ENSLACP00000018356.1 848 TQQAFYSDPNVLYISLHRYDDgNFFPGSGAPEEVGAGAGVGYTVNVAWTGGVDppvgDVEYLTAFRTVVMPIANEFSPDVVLVSAGFDA 936
*******************9746*************************9998777779******************************* PP
class-1.txt 259 lag..Drlgefnlsikghaecvkfvksf 284
+ g +lg ++++ k ++ k + +
ENSLACP00000018356.1 937 VEGhlSPLGGYSVTAKCFGYLTKQLMKL 964
*873359********9999976655544 PP

Protein Sequence
(Fasta)
CLSQYFYISF SLAVDVKSAV PVTMQSSGTG GGGGPVDLRT DTRISLTSVD PLFREQQLQH 60
ELLILKQQQQ MQKQLLFAEF QKQHEHLTRQ HEVQLQEHIK QIASPHQIFH VVYMCPLSSF 120
MKRQQELEQQ QKLEQQRQEE LEKQRLEQQL IMLRNKEKGK ESAIASTEVK LKLQEFLLSK 180
SKDPTTGGLN HSLPGHPKCW SRGSHHTSLD RSSPPQTGTP GTPPSYKLPL LGAYDGKDDF 240
PLRKTASEPN LKVKSRLKQK VAERRSSPLL RRKDGTVIST FKKRAIEITV PSVCNSAPGS 300
GPSSPNSSNS VVAENGFTGS IPNIHMEPGC SQHRALNTDG SASQLSLYTS PSLPNISLGL 360
PAAVTVTNSH INQEAERQAI QSLRQGGALT GCLPGVSLDG EVNSHGHPSL LQHVLLLEQA 420
RQQSALITLP LHGQSPLVTG ERISTNMRTV NKLPRHRPLS RTQSAPLPQS PQALQQLVIQ 480
QQHFQVMEKQ KQYQQQIQLT KVSAAGGKKK KKILSKPGEL PRQPTTHPEE TEEELTEQQD 540
MQEDEALVIT AGQGDVGSNS REEDKDPSGN LQEDCIPVED ETGEKTGTKE ELFFFTEKPF 600
LDQQHLQPLH MYQTSLPISG ISHRPLSRTQ SSPATAGLKT TVVEKPVKHL FTTGIVYDTF 660
MLKHQCTCGN TNDHPEHAGR IQSIWSRLQE TGLLSKCERI RGRKATLDEI QTVHSEHHTL 720
LYGTSPLNRQ KLDSKKLLGP LTQKMYAVLP CGGIGVDSDT VWNEMHSSSA VRMAVGCVIE 780
LAFKVASGEL KNGFAVVRPP GHHAEESTAI IYCYFKKKNH EMLKCLLQSN TVCYYLIVSW 840
DIHHGNGTQQ AFYSDPNVLY ISLHRYDDGN FFPGSGAPEE VGAGAGVGYT VNVAWTGGVD 900
PPVGDVEYLT AFRTVVMPIA NEFSPDVVLV SAGFDAVEGH LSPLGGYSVT AKCFGYLTKQ 960
LMKLAGGRVV LALEGGHDLT AICDASEACV SALLGNELDS LSQSLLQQKP NHNAIASLEK 1020
VIEIQKRKHW SSVQHNASVV GYSLLEAQKQ EKDDADQCKI PHHALFTHQK IRQTDEPMEE 1080
EPVL 1084
Nucleotide Sequence
(Fasta)
TGTTTAAGTC AATATTTCTA TATTTCTTTC TCCCTAGCGG TGGATGTAAA GTCAGCTGTG 60
CCTGTGACAA TGCAGAGCTC AGGCACTGGT GGCGGAGGTG GCCCTGTAGA CCTGCGGACA 120
GACACCCGGA TTTCACTCAC TTCGGTGGAC CCTCTCTTTC GGGAGCAGCA GCTACAGCAT 180
GAACTGCTTA TTCTGAAACA GCAACAGCAA ATGCAGAAAC AACTCTTATT TGCTGAGTTT 240
CAAAAACAGC ATGAGCACTT AACCAGGCAA CATGAAGTAC AGCTTCAGGA GCACATTAAG 300
CAAATTGCTT CACCACACCA AATATTTCAT GTTGTTTACA TGTGCCCCCT ATCCTCTTTT 360
ATGAAGCGTC AGCAGGAGCT GGAACAGCAG CAGAAACTGG AGCAGCAGAG ACAGGAAGAG 420
CTGGAGAAGC AGAGACTTGA GCAACAGCTT ATCATGCTGA GAAACAAGGA GAAGGGCAAA 480
GAAAGTGCAA TAGCCAGCAC AGAAGTAAAA CTGAAGCTAC AAGAATTCCT GTTGAGTAAA 540
TCTAAAGATC CGACAACAGG TGGACTTAAC CATTCCCTCC CTGGGCATCC AAAGTGCTGG 600
TCCAGGGGAT CCCATCATAC CTCGTTGGAC CGGAGTTCTC CTCCACAAAC AGGCACCCCA 660
GGAACACCTC CTTCCTACAA ACTTCCTTTA TTGGGAGCAT ATGATGGAAA GGATGATTTT 720
CCACTGCGTA AAACTGCTTC TGAACCAAAC CTAAAAGTGA AGTCAAGGTT AAAACAAAAA 780
GTGGCAGAAC GGAGGAGTAG CCCTTTACTA AGAAGGAAGG ATGGAACAGT GATCAGTACA 840
TTCAAAAAGA GAGCAATTGA AATCACAGTG CCATCTGTGT GTAACAGTGC CCCGGGTTCT 900
GGTCCCAGCT CCCCAAACAG CTCCAACAGT GTTGTAGCAG AGAATGGCTT CACCGGCTCC 960
ATACCCAATA TTCACATGGA GCCGGGATGT TCCCAACACA GAGCCCTAAA CACAGATGGG 1020
TCAGCTAGCC AGCTTAGTCT CTATACGTCC CCCTCACTGC CCAACATCTC GCTGGGACTA 1080
CCGGCTGCTG TCACCGTGAC AAACTCGCAT ATCAACCAAG AGGCAGAGAG GCAAGCAATC 1140
CAATCCTTGC GCCAGGGTGG AGCACTGACA GGCTGTTTAC CAGGGGTGTC ACTGGATGGA 1200
GAAGTCAACA GTCATGGTCA CCCATCCCTC CTGCAGCATG TTCTCCTCCT CGAGCAGGCA 1260
CGACAGCAGA GTGCTCTTAT CACCTTGCCT CTTCATGGGC AGTCTCCACT GGTGACAGGC 1320
GAGAGAATTT CCACAAACAT GCGGACAGTG AACAAGCTGC CACGACATCG ACCACTGAGC 1380
CGCACACAGT CGGCACCTCT TCCTCAAAGT CCACAGGCGC TGCAACAGCT GGTAATCCAA 1440
CAGCAGCACT TTCAGGTTAT GGAGAAGCAG AAACAATACC AGCAACAGAT CCAACTGACC 1500
AAGGTGAGTG CAGCTGGGGG AAAAAAAAAA AAAAAGATCT TATCAAAACC CGGCGAGCTG 1560
CCCCGCCAGC CCACAACACA TCCTGAAGAG ACAGAGGAGG AGTTGACAGA GCAGCAGGAT 1620
ATGCAGGAGG ACGAGGCATT GGTGATAACA GCAGGGCAGG GTGATGTTGG TTCCAACAGC 1680
AGAGAGGAAG ATAAGGATCC CAGTGGAAAC TTGCAGGAGG ACTGTATTCC GGTTGAGGAT 1740
GAGACAGGAG AAAAGACTGG TACCAAAGAG GAGCTATTTT TTTTCACTGA GAAACCATTC 1800
TTGGACCAGC AGCACCTGCA GCCTCTCCAT ATGTACCAGA CATCCTTACC GATAAGTGGA 1860
ATATCCCATC GACCGCTGAG CCGTACCCAG TCCTCCCCTG CTACTGCTGG TTTAAAGACT 1920
ACCGTGGTGG AGAAGCCAGT TAAACACCTT TTTACTACAG GCATAGTGTA TGATACCTTC 1980
ATGCTGAAGC ATCAGTGCAC CTGCGGGAAC ACTAATGATC ACCCAGAGCA TGCTGGGAGA 2040
ATTCAGAGTA TCTGGTCTAG ACTGCAGGAG ACAGGCTTGC TTAGCAAGTG TGAGCGAATT 2100
CGAGGTAGAA AAGCGACACT GGATGAAATA CAGACTGTGC ATTCTGAGCA CCATACCCTT 2160
TTATATGGAA CCAGTCCCCT CAACAGACAG AAACTCGACA GCAAAAAACT GCTAGGTCCT 2220
CTTACACAAA AAATGTATGC GGTTTTGCCC TGTGGAGGAA TAGGGGTGGA CAGCGACACG 2280
GTTTGGAATG AAATGCACTC CTCTAGTGCA GTGCGTATGG CAGTGGGCTG TGTGATTGAG 2340
CTGGCATTCA AGGTGGCGTC TGGGGAGCTG AAGAATGGTT TTGCTGTAGT TAGACCTCCA 2400
GGGCACCATG CTGAGGAATC CACCGCAATC ATATACTGCT ATTTTAAAAA GAAGAATCAT 2460
GAAATGTTAA AATGTTTACT TCAGTCAAAT ACTGTATGCT ACTATTTGAT AGTAAGCTGG 2520
GATATTCACC ATGGCAACGG TACCCAGCAG GCATTTTATA GTGACCCCAA TGTGCTGTAT 2580
ATCTCACTGC ATCGCTATGA TGATGGTAAC TTTTTCCCAG GCAGCGGTGC ACCAGAGGAG 2640
GTGGGAGCAG GAGCTGGAGT GGGTTATACT GTAAACGTTG CCTGGACGGG TGGTGTGGAT 2700
CCACCAGTAG GAGATGTTGA ATATCTTACT GCGTTTAGGA CAGTGGTGAT GCCAATAGCT 2760
AATGAGTTCT CTCCTGATGT AGTGCTGGTA TCTGCTGGCT TTGATGCGGT TGAGGGTCAT 2820
CTGTCCCCTC TGGGTGGATA CTCTGTTACT GCTAAATGCT TTGGCTATCT AACGAAGCAG 2880
CTGATGAAGT TAGCTGGGGG CCGTGTGGTC CTTGCTTTAG AGGGAGGCCA TGACCTCACT 2940
GCAATCTGTG ATGCATCCGA GGCCTGTGTT TCTGCCTTGT TAGGGAATGA GCTGGATTCT 3000
CTTTCTCAAT CATTGCTTCA GCAAAAGCCC AACCACAATG CAATTGCATC TTTGGAAAAG 3060
GTCATTGAAA TTCAGAAGCG TAAACACTGG AGCTCAGTCC AACATAATGC CTCGGTCGTT 3120
GGATATTCTC TGCTGGAGGC CCAGAAACAA GAGAAGGATG ATGCAGATCA GTGTAAAATA 3180
CCTCACCATG CACTCTTTAC ACATCAGAAA ATCAGACAAA CAGACGAACC AATGGAAGAA 3240
GAGCCAGTGC TGTAA 3256
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ova-0067 ENSOARP00000007394.1 Ovis aries 67 0.0 1133
WERAM-Bot-0149 ENSBTAP00000053450.2 Bos taurus 70 0.0 1133
WERAM-Caj-0108 ENSCJAP00000018977.1 Callithrix jacchus 65 0.0 1112
WERAM-Fec-0025 ENSFCAP00000002029.3 Felis catus 67 0.0 1111
WERAM-Eqc-0174 ENSECAP00000019543.1 Equus caballus 68 0.0 1110
WERAM-Tut-0123 ENSTTRP00000009926.1 Tursiops truncatus 67 0.0 1109
WERAM-Mum-0019 ENSMUSP00000102770.2 Mus musculus 67 0.0 1107
WERAM-Loa-0216 ENSLAFP00000022496.1 Loxodonta africana 66 0.0 1096
WERAM-Mae-0145 ENSMEUP00000015025.1 Macropus eugenii 63 0.0 1035
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 69 0.0 1021
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 67 0.0 838
WERAM-Sus-0129 ENSSSCP00000018401.2 Sus scrofa 68 0.0 746
WERAM-Anc-0037 ENSACAP00000004435.3 Anolis carolinensis 77 0.0 744
WERAM-Leo-0130 ENSLOCP00000016135.1 Lepisosteus oculatus 82 0.0 740
WERAM-Dar-0170 ENSDARP00000100072.2 Danio rerio 76 0.0 735
WERAM-Pes-0126 ENSPSIP00000015149.1 Pelodiscus sinensis 81 0.0 726
WERAM-Ict-0187 ENSSTOP00000016795.1 Ictidomys tridecemlineatus 74 0.0 712
WERAM-Hos-0075 ENSP00000468004.1 Homo sapiens 74 0.0 712
WERAM-Otg-0108 ENSOGAP00000009396.2 Otolemur garnettii 74 0.0 712
WERAM-Chs-0039 ENSCSAP00000014557.1 Chlorocebus sabaeus 74 0.0 711
WERAM-Mam-0051 ENSMMUP00000008945.2 Macaca mulatta 74 0.0 711
WERAM-Dan-0156 ENSDNOP00000017844.1 Dasypus novemcinctus 73 0.0 711
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 73 0.0 711
WERAM-Myl-0072 ENSMLUP00000005848.2 Myotis lucifugus 73 0.0 710
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 75 0.0 710
WERAM-Caf-0149 ENSCAFP00000021172.4 Canis familiaris 73 0.0 710
WERAM-Dio-0163 ENSDORP00000015416.1 Dipodomys ordii 73 0.0 709
WERAM-Poa-0072 ENSPPYP00000009379.1 Pongo abelii 74 0.0 709
WERAM-Paa-0157 ENSPANP00000020771.1 Papio anubis 74 0.0 709
WERAM-Ran-0140 ENSRNOP00000052059.4 Rattus norvegicus 74 0.0 707
WERAM-Mup-0103 ENSMPUP00000009452.1 Mustela putorius furo 77 0.0 706
WERAM-Aim-0213 ENSAMEP00000019373.1 Ailuropoda melanoleuca 74 0.0 705
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 73 0.0 703
WERAM-Cap-0214 ENSCPOP00000014276.1 Cavia porcellus 72 0.0 684
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 72 0.0 676
WERAM-Nol-0057 ENSNLEP00000006711.1 Nomascus leucogenys 71 0.0 676
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 67 0.0 675
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 67 0.0 674
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 68 0.0 673
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 70 0.0 667
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 70 0.0 666
WERAM-Orn-0072 ENSONIP00000007998.1 Oreochromis niloticus 71 0.0 663
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 71 0.0 648
WERAM-Xim-0214 ENSXMAP00000017502.1 Xiphophorus maculatus 69 0.0 644
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 69 0.0 642
WERAM-Pof-0205 ENSPFOP00000017061.2 Poecilia formosa 68 0.0 642
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 67 0.0 640
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 67 0.0 637
WERAM-Gaa-0053 ENSGACP00000006953.1 Gasterosteus aculeatus 69 0.0 637
WERAM-Ten-0172 ENSTNIP00000017010.1 Tetraodon nigroviridis 68 0.0 635
WERAM-Tar-0138 ENSTRUP00000030067.1 Takifugu rubripes 69 0.0 632
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 69 1e-178 624
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 70 1e-176 618
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 63 7e-173 605
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 68 3e-168 590
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 68 5e-167 586
WERAM-Sah-0166 ENSSHAP00000017733.1 Sarcophilus harrisii 81 1e-164 578
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 59 9e-155 545
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 62 2e-152 537
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 56 1e-141 501
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 56 1e-130 465
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 51 4e-128 456
WERAM-Tub-0129 ENSTBEP00000014362.1 Tupaia belangeri 51 2e-120 431
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 59 5e-115 413
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 49 7e-112 402
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 49 8e-100 362
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 52 3e-67 254
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 41 4e-66 250
WERAM-Php-0085 PP1S34_252V6.1 Physcomitrella patens 39 2e-62 238
Created Date 25-Jun-2016