WERAM Information

Tag Content
WERAM ID WERAM-Bro-0017
Ensembl Protein ID Bo1g117500.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo1g117500 Bo1g117500.1 Bo1g117500.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 6.30e-09 37.4 17 123
Organism Brassica oleracea
Domain Profile
  HDAC Class-I
   class-1.txt 190 fhkygeeffPgtGdlsdvgaekgkyyavnvPlk.dgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf. 284
                   +h  g+ f+PgtG  ++vg++ g  y+vnvP +  g+ D+ y   f++v+ ++             G D+  gD lg+ +++  g++++ +++ +  
  Bo1g117500.1  17 LHEGGN-FYPGTGAADEVGTNGGEGYCVNVPWScGGVGDNVYIYAFQHVVIRI------------AGFDAGRGDSLGCCDVTPAGYSRMTQMLGDLc 100
                   677777.************************98358******99999886555............699999***********************998 PP
   class-1.txt 285 nlpllvlGGGGYtlrnvaRcwty 307
                     ++lv+  GGY+lr ++   t 
  Bo1g117500.1 101 GGKMLVILEGGYNLRSISSSATS 123
                   899************99976665 PP
Protein Sequence
(Fasta)		MSIMEMELMR YSSKTNLHEG GNFYPGTGAA DEVGTNGGEG YCVNVPWSCG GVGDNVYIYA 60
FQHVVIRIAG FDAGRGDSLG CCDVTPAGYS RMTQMLGDLC GGKMLVILEG GYNLRSISSS 120
ATSVMKVLMG ESRERVAYSD YAFKSFCKLL LIKSGEKEAS SGPYIVKMES KEAFVQLFIL 180
RADIIDFYTN GVTCELKSLL EPRHKKKKEA SYSAATHQKE LMEQAIWNGD WKSVAMCTIS 240
FKKNASPKSL SLLPTKYALW NLFHQVLSNT EDIQSSAVDL LTYTSQAGLF ESHTRFTVLN 300
DVDETGNEPM SSLSLTKGGE QG 322
Nucleotide Sequence
(Fasta)		ATGTCCATCA TGGAAATGGA ACTCATGAGA TATTCGAGCA AAACAAATCT ACATGAAGGT 60
GGAAACTTCT ATCCAGGTAC CGGAGCTGCT GATGAGGTTG GGACAAATGG TGGTGAGGGA 120
TACTGTGTAA ATGTTCCATG GAGTTGTGGT GGAGTTGGTG ATAATGTCTA TATCTATGCC 180
TTTCAGCATG TAGTTATTCG CATAGCGGGA TTTGATGCGG GTAGAGGAGA CTCACTAGGA 240
TGCTGTGATG TAACTCCAGC TGGTTATTCT CGAATGACAC AGATGCTAGG TGATCTGTGC 300
GGCGGGAAGA TGCTAGTTAT TCTCGAGGGC GGTTACAATC TTCGATCAAT ATCTTCTTCT 360
GCTACATCAG TGATGAAGGT GCTTATGGGT GAATCCAGAG AACGAGTTGC CTATAGCGAC 420
TACGCCTTCA AGAGCTTCTG CAAACTATTA TTGATAAAAT CAGGTGAAAA GGAAGCTTCT 480
TCGGGTCCCT ACATTGTGAA AATGGAATCG AAAGAAGCTT TTGTACAACT ATTTATTTTG 540
CGTGCTGACA TAATAGATTT CTATACCAAC GGTGTTACCT GCGAACTGAA GAGTTTGCTT 600
GAGCCAAGGC ACAAGAAGAA AAAGGAAGCT TCCTATTCAG CAGCTACACA TCAAAAGGAA 660
CTCATGGAGC AAGCAATCTG GAACGGAGAC TGGAAAAGTG TTGCCATGTG CACTATCTCA 720
TTCAAAAAAA ATGCTTCACC AAAGAGTTTG AGCCTACTCC CAACCAAGTA CGCATTATGG 780
AATTTGTTCC ATCAAGTATT ATCAAACACT GAGGACATAC AGTCTTCAGC AGTTGATCTT 840
TTAACCTATA CATCACAAGC TGGTCTATTC GAAAGTCATA CTCGTTTCAC CGTGCTAAAT 900
GATGTTGATG AAACTGGGAA TGAGCCGATG AGCTCTCTCA GTTTGACAAA GGGTGGAGAG 960
CAGGGGTGA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0115 Bra022329.1-P Brassica rapa 81 2e-57 219
WERAM-Art-0072 AT3G18520.1 Arabidopsis thaliana 80 6e-57 218
WERAM-Arl-0060 fgenesh2_kg.3__ 2057__ AT3G18520.1 Arabidopsis lyrata 81 1e-56 217
WERAM-Prp-0050 EMJ11455 Prunus persica 69 7e-51 198
WERAM-Glm-0048 GLYMA05G07991.1 Glycine max 58 1e-48 191
WERAM-Thc-0030 EOY20940 Theobroma cacao 72 1e-48 190
WERAM-Viv-0105 VIT_17s0000g04120.t01 Vitis vinifera 71 2e-48 190
WERAM-Sol-0057 Solyc03g119730.2.1 Solanum lycopersicum 72 8e-48 187
WERAM-Sot-0015 PGSC0003DMT400014582 Solanum tuberosum 63 2e-47 186
WERAM-Pot-0130 POPTR_0012s05730.1 Populus trichocarpa 72 2e-47 186
WERAM-Met-0113 KEH32089 Medicago truncatula 69 8e-46 181
WERAM-Mua-0121 GSMUA_Achr8P20260_001 Musa acuminata 66 5e-45 178
WERAM-Tra-0242 Traes_5DS_18DC37E47.1 Triticum aestivum 69 7e-45 178
WERAM-Aet-0038 EMT15178 Aegilops tauschii 69 1e-44 177
WERAM-Tru-0033 TRIUR3_17245-P1 Triticum urartu 68 1e-44 177
WERAM-Hov-0036 MLOC_37038.1 Hordeum vulgare 63 1e-44 177
WERAM-Amt-0097 ERN15947 Amborella trichopoda 66 2e-44 176
WERAM-Orl-0056 KN539089.1_FGP007 Oryza longistaminata 67 4e-44 176
WERAM-Orp-0068 OPUNC07G03920.1 Oryza punctata 68 5e-44 175
WERAM-Orbr-0079 OB07G13070.1 Oryza brachyantha 68 6e-44 175
WERAM-Orni-0070 ONIVA07G02650.1 Oryza nivara 67 1e-43 174
WERAM-Orr-0073 ORUFI07G03770.1 Oryza rufipogon 67 1e-43 174
WERAM-Lep-0070 LPERR07G03600.1 Leersia perrieri 67 1e-43 174
WERAM-Orb-0071 OBART07G04070.1 Oryza barthii 67 2e-43 173
WERAM-Ors-0064 OS07T0164100-01 Oryza sativa 67 2e-43 173
WERAM-Ori-0081 BGIOSGA024767-PA Oryza indica 67 2e-43 173
WERAM-Orgl-0069 OGLUM07G03480.1 Oryza glumaepatula 67 2e-43 173
WERAM-Org-0071 ORGLA07G0034700.1 Oryza glaberrima 67 3e-43 172
WERAM-Zem-0064 GRMZM2G107309_P01 Zea mays 57 5e-42 168
WERAM-Sem-0039 EFJ31239 Selaginella moellendorffii 60 5e-42 168
WERAM-Sob-0016 Sb02g003690.1 Sorghum bicolor 57 9e-42 167
WERAM-Sei-0111 Si029194m Setaria italica 67 8e-41 164
WERAM-Php-0077 PP1S312_11V6.1 Physcomitrella patens 62 1e-39 160
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 52 3e-30 129
WERAM-Yal-0023 CAG79971 Yarrowia lipolytica 52 4e-30 129
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 49 5e-30 129
WERAM-Kop-0012 CAY68916 Komagataella pastoris 47 6e-30 128
WERAM-Phn-0010 SNOT_01279 Phaeosphaeria nodorum 50 5e-29 125
WERAM-Asfu-0010 CADAFUAP00002902 Aspergillus fumigatus 45 1e-28 124
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 44 2e-28 124
WERAM-Asf-0004 CADAFLAP00001888 Aspergillus flavus 45 2e-28 124
WERAM-Aso-0015 CADAORAP00001816 Aspergillus oryzae 45 2e-28 124
WERAM-Caa-0034 KGT64501 Candida albicans 48 3e-28 122
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 49 4e-28 122
WERAM-Asg-0010 AAS51704 Ashbya gossypii 47 4e-28 122
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 50 4e-28 122
WERAM-Pug-0031 EFP89333 Puccinia graminis 44 4e-28 122
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 45 7e-28 122
WERAM-Tum-0026 CAZ84932 Tuber melanosporum 46 9e-28 121
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 48 9e-28 121
WERAM-Put-0014 PTTG_07163P0 Puccinia triticina 44 2e-27 120
WERAM-Coi-0028 EAS30926 Coccidioides immitis 47 2e-27 120
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 51 3e-27 119
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 42 3e-27 119
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 45 4e-27 119
WERAM-Zyt-0016 Mycgr3P37223 Zymoseptoria tritici 45 7e-27 118
WERAM-Usm-0012 UM02102P0 Ustilago maydis 38 9e-27 118
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 45 2e-26 117
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 43 2e-26 117
WERAM-Xim-0160 ENSXMAP00000013063.1 Xiphophorus maculatus 43 2e-26 117
WERAM-Pof-0022 ENSPFOP00000001799.2 Poecilia formosa 40 3e-26 116
WERAM-Cag-0018 CAG60803 Candida glabrata 44 9e-26 114
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 45 1e-25 114
WERAM-Orn-0011 ENSONIP00000001061.1 Oreochromis niloticus 45 1e-25 114
WERAM-Tar-0042 ENSTRUP00000010127.1 Takifugu rubripes 44 1e-25 114
WERAM-Ten-0019 ENSTNIP00000004593.1 Tetraodon nigroviridis 44 2e-25 114
WERAM-Dar-0023 ENSDARP00000124246.1 Danio rerio 43 2e-25 114
WERAM-Miv-0034 MVLG_04888T0 Microbotryum violaceum 41 2e-25 114
WERAM-Ved-0005 EGY17208 Verticillium dahliae 43 3e-25 112
WERAM-Lab-0047 EDQ99497 Laccaria bicolor 38 3e-25 112
WERAM-Brd-0010 BRADI1G22240.1 Brachypodium distachyon 38 4e-25 112
WERAM-Gag-0014 GGTG_04308T0 Gaeumannomyces graminis 43 4e-25 112
WERAM-Orla-0211 ENSORLP00000025157.1 Oryzias latipes 43 6e-25 112
WERAM-Trv-0041 EHK18675 Trichoderma virens 44 9e-25 111
WERAM-Chr-0002 EDP00159 Chlamydomonas reinhardtii 39 2e-24 110
WERAM-Mod-0081 ENSMODP00000012731.2 Monodelphis domestica 41 9e-24 108
WERAM-Asm-0181 ENSAMXP00000017644.1 Astyanax mexicanus 42 1e-23 108
WERAM-Fuo-0035 FOXG_13914P0 Fusarium oxysporum 43 1e-23 107
WERAM-Xet-0155 ENSXETP00000050501.3 Xenopus tropicalis 41 1e-23 107
WERAM-Mum-0115 ENSMUSP00000033501.8 Mus musculus 39 2e-23 107
WERAM-Map-0033 MAPG_10880T0 Magnaporthe poae 43 2e-23 107
WERAM-Ran-0209 ENSRNOP00000009295.5 Rattus norvegicus 38 6e-23 105
WERAM-Orc-0102 ENSOCUP00000008741.3 Oryctolagus cuniculus 38 6e-23 105
WERAM-Sah-0012 ENSSHAP00000001165.1 Sarcophilus harrisii 40 8e-23 105
WERAM-Chg-0033 EAQ86725 Chaetomium globosum 43 9e-23 104
WERAM-Mae-0111 ENSMEUP00000010640.1 Macropus eugenii 40 1e-22 104
WERAM-Anc-0082 ENSACAP00000007918.3 Anolis carolinensis 40 1e-22 104
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 42 1e-22 104
WERAM-Trr-0039 EGR46026 Trichoderma reesei 42 1e-22 104
WERAM-Ect-0051 ENSETEP00000005266.1 Echinops telfairi 37 1e-22 104
WERAM-Caf-0161 ENSCAFP00000022990.3 Canis familiaris 40 2e-22 103
WERAM-Orm-0067 OMERI07G02600.4 Oryza meridionalis 56 2e-22 103
WERAM-Aim-0139 ENSAMEP00000013236.1 Ailuropoda melanoleuca 39 2e-22 103
WERAM-Cae-0060 F41H10.6b Caenorhabditis elegans 43 3e-22 103
WERAM-Nec-0012 EFNCRP00000001681 Neurospora crassa 42 3e-22 103
WERAM-Mao-0002 MGG_01076T0 Magnaporthe oryzae 37 4e-22 102
WERAM-Ict-0125 ENSSTOP00000012693.2 Ictidomys tridecemlineatus 39 4e-22 102
WERAM-Sus-0177 ENSSSCP00000022636.1 Sus scrofa 39 8e-22 101
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 36 1e-21 101
WERAM-Eqc-0001 ENSECAP00000001121.1 Equus caballus 38 1e-21 101
WERAM-Mup-0158 ENSMPUP00000013557.1 Mustela putorius furo 38 1e-21 100
WERAM-Ptv-0077 ENSPVAP00000007213.1 Pteropus vampyrus 40 2e-21 100
WERAM-Fec-0031 ENSFCAP00000002366.3 Felis catus 38 2e-21 100
WERAM-Ere-0025 ENSEEUP00000001892.1 Erinaceus europaeus 35 2e-21 100
WERAM-Myl-0104 ENSMLUP00000008295.2 Myotis lucifugus 38 2e-21 100
WERAM-Ova-0124 ENSOARP00000012678.1 Ovis aries 38 3e-21 99.8
WERAM-Drm-0028 FBpp0290988 Drosophila melanogaster 40 5e-21 99.0
WERAM-Bot-0122 ENSBTAP00000017618.5 Bos taurus 38 7e-21 98.6
WERAM-Osl-0043 ABO96923 Ostreococcus lucimarinus 42 9e-21 98.2
WERAM-Caj-0022 ENSCJAP00000004409.2 Callithrix jacchus 29 1e-20 98.2
WERAM-Cap-0109 ENSCPOP00000008049.2 Cavia porcellus 40 1e-20 98.2
WERAM-Tut-0056 ENSTTRP00000004443.1 Tursiops truncatus 30 1e-20 97.8
WERAM-Prc-0036 ENSPCAP00000003334.1 Procavia capensis 38 2e-20 97.4
WERAM-Otg-0144 ENSOGAP00000012420.2 Otolemur garnettii 37 2e-20 97.4
WERAM-Gog-0047 ENSGGOP00000004443.2 Gorilla gorilla 38 2e-20 97.4
WERAM-Chs-0158 ENSCSAP00000009365.1 Chlorocebus sabaeus 38 2e-20 97.4
WERAM-Hos-0047 ENSP00000365804.2 Homo sapiens 38 2e-20 97.1
WERAM-Mam-0153 ENSMMUP00000021637.2 Macaca mulatta 38 2e-20 97.1
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 39 2e-20 97.1
WERAM-Loa-0047 ENSLAFP00000003196.3 Loxodonta africana 38 2e-20 97.1
WERAM-Paa-0049 ENSPANP00000006915.1 Papio anubis 38 2e-20 97.1
WERAM-Dan-0022 ENSDNOP00000002136.3 Dasypus novemcinctus 39 2e-20 97.1
WERAM-Tas-0021 ENSTSYP00000002661.1 Tarsius syrichta 39 4e-20 95.9
WERAM-Dio-0162 ENSDORP00000015305.1 Dipodomys ordii 40 6e-20 95.5
WERAM-Pat-0185 ENSPTRP00000037550.5 Pan troglodytes 36 7e-20 95.1
WERAM-Poa-0196 ENSPPYP00000022747.2 Pongo abelii 29 1e-19 94.7
WERAM-Nol-0078 ENSNLEP00000009627.2 Nomascus leucogenys 36 1e-19 94.4
WERAM-Tag-0054 ENSTGUP00000003859.1 Taeniopygia guttata 40 1e-19 94.4
WERAM-Fia-0129 ENSFALP00000010805.1 Ficedula albicollis 40 8e-19 91.7
WERAM-Gaga-0067 ENSGALP00000010190.4 Gallus gallus 39 1e-18 91.7
WERAM-Pes-0124 ENSPSIP00000014863.1 Pelodiscus sinensis 39 1e-18 91.3
WERAM-Meg-0108 ENSMGAP00000010913.2 Meleagris gallopavo 39 1e-18 90.9
WERAM-Leo-0108 ENSLOCP00000014009.1 Lepisosteus oculatus 36 1e-18 90.9
WERAM-Anp-0061 ENSAPLP00000006782.1 Anas platyrhynchos 40 2e-18 90.9
WERAM-Gaa-0053 ENSGACP00000006953.1 Gasterosteus aculeatus 37 3e-18 89.7
Created Date 25-Jun-2016