class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeaglle.kleelkarkatkeelqlvHseehvelletaekl 77 
                                       +++ +de+ml h+  e + + hpE+p+R++ai  +l++ag+ + +++ ++ar+ tk+elq+vH++ehv+ ++t+++l
  fgenesh2_kg.3__2057__AT3G18520.1 150 TAVGFDERMLLHSEFEVKPHPHPERPDRLRAIAASLATAGVFPgRCLPINAREITKQELQMVHTSEHVDAVNTTSQL 226
                                       6799***********************************998769*****************************665 PP
                       class-2.txt  78 ekeelesltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaak 154
                                         +  +       ++y+++ s++aarla+G + +l++++++g++kngfa+vRPPGHHa  ++amGFCl+nn+avaa 
  fgenesh2_kg.3__2057__AT3G18520.1 227 LYSYFT------SDTYANEYSARAARLAAGLCADLATEIFTGRVKNGFALVRPPGHHAGIRHAMGFCLHNNAAVAAL 297
                                       555444......478*************************************************************9 PP
                       class-2.txt 155 llqqklkvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl 231
                                       ++q   + kk+livDwDvHhGnGtqeif+++++vly+SlHR++ g+f+p  g+ga+devg++ geg+ vNv+w++g+
  fgenesh2_kg.3__2057__AT3G18520.1 298 VAQAAGA-KKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGHFYP--GTGAADEVGTNGGEGYCVNVPWSCGG 371
                                       9887766.*****************************************..************************** PP
                       class-2.txt 232 mgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatltkqllklaggrvvlvlEGGynlka 308
                                       +gd++y++af++vvlpia+ F+Pd+v++saGfDaa+gdplg ++vt+++y+++t++l +l+gg+++++lEGGynl++
  fgenesh2_kg.3__2057__AT3G18520.1 372 VGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRS 448
                                       ***************************************************************************** PP
                       class-2.txt 309 iaeaveavvkaLlg 322
                                       i+++++av+k+Llg
  fgenesh2_kg.3__2057__AT3G18520.1 449 ISSSATAVIKVLLG 462
                                       ************96 PP

                       class-1.txt 131 lhhakkseasGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkyge.effPgtGdls 205
                                        hha  ++a Gfc  n+  +a l  +    k+vl +d d+hhG+g +e f++ + v+ +s+h+++  +f+PgtG  +
  fgenesh2_kg.3__2057__AT3G18520.1 275 GHHAGIRHAMGFCLHNNAAVAALVAQAaGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGgHFYPGTGAAD 351
                                       49************9998887776665489*********************************9762699******* PP
                       class-1.txt 206 dvgaekgkyyavnvPlk.dgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfv 281
                                       +vg++ g  y+vnvP +  g+ D+ y   f++v+ ++ +af+P+ v++  G D+  gD+lg+ +++  g++++ +++
  fgenesh2_kg.3__2057__AT3G18520.1 352 EVGTNGGEGYCVNVPWScGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQML 428
                                       ***************98368********************************************************* PP
                       class-1.txt 282 ksf.nlpllvlGGGGYtlrnvaRcwtye 308
                                        +    ++lv+  GGY+lr ++   t  
  fgenesh2_kg.3__2057__AT3G18520.1 429 GDLcGGKMLVILEGGYNLRSISSSATAV 456
                                       *998899************999776655 PP