Tag |
Content |
WERAM ID |
WERAM-Viv-0105 |
Ensembl Protein ID |
VIT_17s0000g04120.t01 |
Gene Name |
VIT_17s0000g04120 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
2.40e-114 |
382.4 |
293 |
605 |
HDAC |
Class-I |
4.60e-34 |
119 |
419 |
599 |
|
Organism |
Vitis vinifera |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeaglle.kleelkarkatkeelqlvHseehvelletaeklekeelesltvd 88 +++ +de+ml h+ +e +++ hpE+p+R++ai +l++ag+ + k+ + ar+ t+eelq+vHs ehve++e +++ ++ VIT_17s0000g04120.t01 293 TAVGFDERMLLHSEVEMKSHPHPERPDRLRAIAASLATAGIFPgKCYPILAREITREELQMVHSLEHVETVELTSRILSSYF------ 374 6799***********************************999779**************************99954444433...... PP class-2.txt 89 sdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGn 176 + ++y++++s+ aarla+G + +l++++++g++kngfa+vRPPGHHa s+amGFCl+nn+avaa + q +k++livDwDvHhGn VIT_17s0000g04120.t01 375 TPDTYANEHSALAARLAAGLCADLASAIFSGRAKNGFALVRPPGHHAGVSQAMGFCLHNNAAVAAL-ASQVSGAKRVLIVDWDVHHGN 461 4589***********************************************************995.5666667************** PP class-2.txt 177 GtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfD 264 Gtqeif+++++vly+SlHR++ g+f+p g+ga +evg+ +eg+ vN++w+ g++gd++y++af++vvlpia+eF+Pd+ ++saGfD VIT_17s0000g04120.t01 462 GTQEIFEQNKSVLYISLHRHEGGNFYP--GTGASHEVGSMGAEGYCVNIPWSRGGVGDNDYIFAFQHVVLPIASEFAPDFTIISAGFD 547 ***************************..*********************************************************** PP class-2.txt 265 aaegdplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 aa+gdplg ++vt++++a++t +l l+gg+++++lEGGynl++i+++++av+k+Llg VIT_17s0000g04120.t01 548 AARGDPLGCCDVTPAGFAKMTDMLNVLSGGKLLVILEGGYNLRSISSSATAVIKVLLG 605 ********************************************************96 PP
HDAC Class-I
class-1.txt 132 hhakkseasGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyav 217 hha s+a Gfc n+ +a l + krvl +d d+hhG+g +e f++ + v+ +s+h+++ +f+PgtG ++vg y+v VIT_17s0000g04120.t01 419 HHAGVSQAMGFCLHNNAAVAALASQVsGAKRVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGgNFYPGTGASHEVGSMGAEGYCV 506 *************9998887776554389*********************************97527********************* PP class-1.txt 218 nvPl.kdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGGGGYtlrnvaR 303 n+P + g+ D+ y f++v+ ++ + f P+ ++ G D+ gD+lg+ +++ g+a++ +++ +llv+ GGY+lr ++ VIT_17s0000g04120.t01 507 NIPWsRGGVGDNDYIFAFQHVVLPIASEFAPDFTIISAGFDAARGDPLGCCDVTPAGFAKMTDMLNVLsGGKLLVILEGGYNLRSISS 594 ***83568**********************************************************9977899***********9997 PP class-1.txt 304 cwtye 308 t VIT_17s0000g04120.t01 595 SATAV 599 76655 PP
|
Protein Sequence (Fasta) | MNKLIGMDII GETKYKYNKI EGLNAKSPAL NELDRYGAQS PSSLPEFAVS IRAALPGSLS 60 GAKVWPSKCK RTCSSFMRGC DQNQDLHEGM ILNETCYVNS EHNMVSETLQ NTRLMDGKAE 120 NNLHDQNDQI LLEGFNGQHE NVGLDGINAT PCSDENCREE NTSGTSSRDM ADNLNGSMLP 180 DIISKRVRQQ KEMTLEDMYN DQYDYDDDDD SDWEPLPGPT AVIRWFCVNC TMANQDDVVH 240 CDICGEHKES GILKHGFFAS PFSQEAGLIH TDSEVVERCQ DSRSPNLTSN NSTAVGFDER 300 MLLHSEVEMK SHPHPERPDR LRAIAASLAT AGIFPGKCYP ILAREITREE LQMVHSLEHV 360 ETVELTSRIL SSYFTPDTYA NEHSALAARL AAGLCADLAS AIFSGRAKNG FALVRPPGHH 420 AGVSQAMGFC LHNNAAVAAL ASQVSGAKRV LIVDWDVHHG NGTQEIFEQN KSVLYISLHR 480 HEGGNFYPGT GASHEVGSMG AEGYCVNIPW SRGGVGDNDY IFAFQHVVLP IASEFAPDFT 540 IISAGFDAAR GDPLGCCDVT PAGFAKMTDM LNVLSGGKLL VILEGGYNLR SISSSATAVI 600 KVLLGETPGC ELDNCLPSKS GLRTVLEVLK IQMNFWSTLA STLTKLESEW GSCLVENRKK 660 HTKKRRRAVA PKPWKWGRKT LLYHLLSGHL RYKSKRI 697Protein Fasta Sequence
>VIT_17s0000g04120.t01|Class-I|Vitis vinifera MNKLIGMDIIGETKYKYNKIEGLNAKSPALNELDRYGAQSPSSLPEFAVSIRAALPGSLSGAKVWPSKCKRTCSSFMRGCDQNQDLHEGMILNETCYVNSEHNMVSETLQNTRLMDGKAENNLHDQNDQILLEGFNGQHENVGLDGINATPCSDENCREENTSGTSSRDMADNLNGSMLPDIISKRVRQQKEMTLEDMYNDQYDYDDDDDSDWEPLPGPTAVIRWFCVNCTMANQDDVVHCDICGEHKESGILKHGFFASPFSQEAGLIHTDSEVVERCQDSRSPNLTSNNSTAVGFDERMLLHSEVEMKSHPHPERPDRLRAIAASLATAGIFPGKCYPILAREITREELQMVHSLEHVETVELTSRILSSYFTPDTYANEHSALAARLAAGLCADLASAIFSGRAKNGFALVRPPGHHAGVSQAMGFCLHNNAAVAALASQVSGAKRVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTGASHEVGSMGAEGYCVNIPWSRGGVGDNDYIFAFQHVVLPIASEFAPDFTIISAGFDAARGDPLGCCDVTPAGFAKMTDMLNVLSGGKLLVILEGGYNLRSISSSATAVIKVLLGETPGCELDNCLPSKSGLRTVLEVLKIQMNFWSTLASTLTKLESEWGSCLVENRKKHTKKRRRAVAPKPWKWGRKTLLYHLLSGHLRYKSKRI
|
Nucleotide Sequence (Fasta) | ATGAATAAAT TGATAGGAAT GGATATAATT GGTGAGACAA AGTACAAATA CAACAAAATA 60 GAGGGGTTAA ATGCAAAATC TCCGGCTCTC AACGAGTTAG ATCGATACGG GGCTCAGTCA 120 CCTTCCTCGC TGCCCGAATT TGCTGTGAGC ATCAGAGCTG CTCTACCAGG GTCACTCTCT 180 GGTGCCAAGG TCTGGCCTTC CAAGTGCAAA AGAACATGTT CGAGTTTTAT GAGGGGATGT 240 GACCAGAACC AGGATCTTCA TGAAGGAATG ATTCTGAATG AAACTTGTTA TGTGAATTCT 300 GAACATAACA TGGTCTCGGA AACGCTACAA AATACTCGGC TGATGGATGG AAAGGCTGAA 360 AACAATCTTC ATGATCAAAA TGATCAAATT CTACTGGAAG GCTTTAATGG ACAGCATGAA 420 AATGTGGGGT TGGATGGGAT TAATGCTACT CCCTGTTCTG ATGAAAATTG TCGGGAAGAA 480 AATACATCAG GAACATCCAG TAGAGATATG GCAGACAATC TAAATGGAAG CATGCTACCA 540 GATATTATAT CTAAAAGAGT GAGGCAGCAG AAAGAAATGA CTTTGGAAGA TATGTATAAT 600 GACCAATATG ATTATGATGA TGACGATGAT AGTGATTGGG AGCCCTTGCC GGGGCCTACA 660 GCAGTCATAA GGTGGTTTTG TGTCAATTGT ACGATGGCTA ACCAAGACGA TGTTGTACAT 720 TGTGATATAT GTGGGGAACA TAAAGAATCC GGAATCCTCA AGCATGGGTT TTTTGCATCA 780 CCTTTTTCAC AAGAAGCAGG CCTTATTCAT ACTGATTCAG AAGTAGTAGA AAGATGCCAA 840 GACTCACGCT CACCAAATCT CACCTCAAAC AACTCCACTG CTGTGGGTTT TGATGAGAGA 900 ATGTTGCTGC ACTCTGAAGT TGAAATGAAG TCACACCCAC ACCCAGAAAG GCCAGACCGT 960 CTTCGAGCTA TTGCTGCTAG CCTTGCTACT GCAGGTATAT TTCCTGGAAA ATGCTACCCA 1020 ATTTTGGCAA GAGAGATTAC TCGAGAAGAA CTGCAGATGG TCCATTCTTT GGAGCATGTT 1080 GAAACTGTAG AACTTACAAG CCGTATTCTT TCGAGTTATT TCACTCCTGA TACATATGCT 1140 AATGAGCATT CAGCACTTGC TGCTCGGCTT GCAGCTGGTT TATGTGCTGA TCTTGCTTCT 1200 GCAATTTTTT CTGGACGTGC CAAAAATGGT TTTGCTTTGG TTCGCCCTCC TGGTCATCAT 1260 GCTGGTGTTA GTCAGGCGAT GGGGTTCTGC CTCCACAATA ATGCGGCGGT TGCTGCACTA 1320 GCTTCACAGG TTTCAGGGGC TAAGAGGGTG CTAATTGTTG ATTGGGATGT ACATCACGGA 1380 AATGGCACAC AAGAGATATT TGAGCAGAAC AAATCGGTTT TGTATATATC CTTGCATAGA 1440 CATGAAGGGG GAAACTTCTA TCCTGGTACT GGGGCATCAC ACGAGGTGGG CAGTATGGGT 1500 GCAGAAGGAT ACTGTGTGAA TATTCCATGG AGTCGTGGAG GAGTTGGGGA CAATGATTAT 1560 ATTTTTGCAT TCCAGCATGT TGTGCTTCCT ATAGCTTCTG AGTTTGCTCC TGATTTCACC 1620 ATAATATCAG CAGGATTTGA TGCTGCAAGG GGTGATCCCC TTGGTTGCTG TGATGTAACA 1680 CCTGCTGGCT TTGCAAAGAT GACAGATATG TTGAATGTTC TCTCTGGTGG AAAGTTGCTT 1740 GTTATTCTTG AGGGCGGCTA TAATCTTCGT TCAATATCAT CATCTGCCAC TGCAGTGATC 1800 AAGGTACTGC TTGGTGAAAC TCCTGGATGC GAATTGGATA ACTGCTTGCC TTCCAAGTCT 1860 GGCTTGCGAA CTGTTCTGGA AGTCCTGAAA ATTCAGATGA ACTTCTGGTC TACTCTGGCA 1920 TCGACCCTTA CAAAATTGGA GTCAGAATGG GGATCATGTT TAGTTGAAAA CCGAAAAAAG 1980 CATACTAAAA AGAGACGGCG GGCTGTGGCA CCAAAACCAT GGAAATGGGG GCGAAAAACT 2040 TTGTTATATC ATCTTCTGTC TGGCCATCTT CGTTACAAAT CAAAGCGGAT TTAGGTGACT 2100 TCATAGATCT GATTTTTACG CATATGCTTC TTTTACTTGT AATTTTCCCT TTATGCACCC 2160 TTGTATACCA GCTAGTTTCA GGGTAATTTC CTTTTTGTAT GAAATGACGG CTTAATTATA 2220 TTCAAGTGCT TCAGGATAAC TTCTTTTTTC TCATGAAGTC TAATTGTAAT CATGGTTTTA 2280 CATTTCCCTC CCCTTTTCCT TCTACCAGAA GGGGGGA
2318Nucleotide Fasta Sequence
>VIT_17s0000g04120.t01|Class-I|Vitis vinifera ATGAATAAATTGATAGGAATGGATATAATTGGTGAGACAAAGTACAAATACAACAAAATAGAGGGGTTAAATGCAAAATCTCCGGCTCTCAACGAGTTAGATCGATACGGGGCTCAGTCACCTTCCTCGCTGCCCGAATTTGCTGTGAGCATCAGAGCTGCTCTACCAGGGTCACTCTCTGGTGCCAAGGTCTGGCCTTCCAAGTGCAAAAGAACATGTTCGAGTTTTATGAGGGGATGTGACCAGAACCAGGATCTTCATGAAGGAATGATTCTGAATGAAACTTGTTATGTGAATTCTGAACATAACATGGTCTCGGAAACGCTACAAAATACTCGGCTGATGGATGGAAAGGCTGAAAACAATCTTCATGATCAAAATGATCAAATTCTACTGGAAGGCTTTAATGGACAGCATGAAAATGTGGGGTTGGATGGGATTAATGCTACTCCCTGTTCTGATGAAAATTGTCGGGAAGAAAATACATCAGGAACATCCAGTAGAGATATGGCAGACAATCTAAATGGAAGCATGCTACCAGATATTATATCTAAAAGAGTGAGGCAGCAGAAAGAAATGACTTTGGAAGATATGTATAATGACCAATATGATTATGATGATGACGATGATAGTGATTGGGAGCCCTTGCCGGGGCCTACAGCAGTCATAAGGTGGTTTTGTGTCAATTGTACGATGGCTAACCAAGACGATGTTGTACATTGTGATATATGTGGGGAACATAAAGAATCCGGAATCCTCAAGCATGGGTTTTTTGCATCACCTTTTTCACAAGAAGCAGGCCTTATTCATACTGATTCAGAAGTAGTAGAAAGATGCCAAGACTCACGCTCACCAAATCTCACCTCAAACAACTCCACTGCTGTGGGTTTTGATGAGAGAATGTTGCTGCACTCTGAAGTTGAAATGAAGTCACACCCACACCCAGAAAGGCCAGACCGTCTTCGAGCTATTGCTGCTAGCCTTGCTACTGCAGGTATATTTCCTGGAAAATGCTACCCAATTTTGGCAAGAGAGATTACTCGAGAAGAACTGCAGATGGTCCATTCTTTGGAGCATGTTGAAACTGTAGAACTTACAAGCCGTATTCTTTCGAGTTATTTCACTCCTGATACATATGCTAATGAGCATTCAGCACTTGCTGCTCGGCTTGCAGCTGGTTTATGTGCTGATCTTGCTTCTGCAATTTTTTCTGGACGTGCCAAAAATGGTTTTGCTTTGGTTCGCCCTCCTGGTCATCATGCTGGTGTTAGTCAGGCGATGGGGTTCTGCCTCCACAATAATGCGGCGGTTGCTGCACTAGCTTCACAGGTTTCAGGGGCTAAGAGGGTGCTAATTGTTGATTGGGATGTACATCACGGAAATGGCACACAAGAGATATTTGAGCAGAACAAATCGGTTTTGTATATATCCTTGCATAGACATGAAGGGGGAAACTTCTATCCTGGTACTGGGGCATCACACGAGGTGGGCAGTATGGGTGCAGAAGGATACTGTGTGAATATTCCATGGAGTCGTGGAGGAGTTGGGGACAATGATTATATTTTTGCATTCCAGCATGTTGTGCTTCCTATAGCTTCTGAGTTTGCTCCTGATTTCACCATAATATCAGCAGGATTTGATGCTGCAAGGGGTGATCCCCTTGGTTGCTGTGATGTAACACCTGCTGGCTTTGCAAAGATGACAGATATGTTGAATGTTCTCTCTGGTGGAAAGTTGCTTGTTATTCTTGAGGGCGGCTATAATCTTCGTTCAATATCATCATCTGCCACTGCAGTGATCAAGGTACTGCTTGGTGAAACTCCTGGATGCGAATTGGATAACTGCTTGCCTTCCAAGTCTGGCTTGCGAACTGTTCTGGAAGTCCTGAAAATTCAGATGAACTTCTGGTCTACTCTGGCATCGACCCTTACAAAATTGGAGTCAGAATGGGGATCATGTTTAGTTGAAAACCGAAAAAAGCATACTAAAAAGAGACGGCGGGCTGTGGCACCAAAACCATGGAAATGGGGGCGAAAAACTTTGTTATATCATCTTCTGTCTGGCCATCTTCGTTACAAATCAAAGCGGATTTAGGTGACTTCATAGATCTGATTTTTACGCATATGCTTCTTTTACTTGTAATTTTCCCTTTATGCACCCTTGTATACCAGCTAGTTTCAGGGTAATTTCCTTTTTGTATGAAATGACGGCTTAATTATATTCAAGTGCTTCAGGATAACTTCTTTTTTCTCATGAAGTCTAATTGTAATCATGGTTTTACATTTCCCTCCCCTTTTCCTTCTACCAGAAGGGGGGA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |