WERAM Information

Tag Content
WERAM ID WERAM-Brr-0010
Ensembl Protein ID Bra001708.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra001708 Bra001708.1 Bra001708.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.20e-19 71.2 190 345
Organism Brassica rapa
Domain Profile
  HDAC Class-I
    class-1.txt 131 lhhakkseasGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkyge.effPgtGdlsdvga 209
                     hha  +++ Gfc  n+  +a l  +    k+vl +d d+hhG+g +e f++ + vm +s+h+++  + +PgtG  ++ ++
  Bra001708.1-P 190 GHHAGIKDSMGFCLHNNAAVAALVAQAlGAKKVLIVDWDVHHGNGTQEIFEKNKSVMYISLHRHEGgKLYPGTGAANELRC 270
                    499*999********9998887776665899********************************975279*****9888765 PP
    class-1.txt 247 Peavvlq.cGaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGGGGYtlrnvaRcwtye 308
                     + vvl   G D+  gD+lg+ +++  g++++ +++ +    ++lv+  GGY+lr ++   t  
  Bra001708.1-P 282 FQHVVLPiAGFDAAKGDPLGCCKVTPAGYSRMTQMLGDLcGGKMLVILEGGYNLRSISSSATAV 345
                    45666652589**************************998899************999776655 PP
Protein Sequence
(Fasta)		MKKKSKDEAL KNWEKKKKPS SPKRVEKSLK KKRGRLYIIV KSQGVWDPQA WMFCKDNGLT 60
QVEEKRGGSS PSTSSTAVGF DERMLLHSEF EVKELPHVER PDRLRAIAAS LATAGVFPGR 120
CFPIHAREIT KQELQMVHTS EHVDAVDITS QLHNRFSRAA RLAAGLCADL AKEIFSGRVK 180
NAFALVRPPG HHAGIKDSMG FCLHNNAAVA ALVAQALGAK KVLIVDWDVH HGNGTQEIFE 240
KNKSVMYISL HRHEGGKLYP GTGAANELRC SGVGDRDYIY AFQHVVLPIA GFDAAKGDPL 300
GCCKVTPAGY SRMTQMLGDL CGGKMLVILE GGYNLRSISS SATAVIKVLL GENAENDLPI 360
ATAPPSRACL RTVLDVMNIQ MKFWPSLAAS YSKLLSEIQS GKQVGQRKER SLGERRS 417
Nucleotide Sequence
(Fasta)		ATGAAGAAAA AGTCAAAGGA TGAGGCATTG AAGAATTGGG AGAAGAAGAA GAAGCCGTCT 60
TCACCAAAAC GGGTTGAGAA GTCTCTGAAA AAGAAGAGAG GAAGGCTCTA CATTATTGTG 120
AAATCACAAG GAGTCTGGGA TCCTCAGGCA TGGATGTTTT GCAAAGATAA TGGTCTCACC 180
CAAGTTGAAG AGAAACGTGG AGGAAGCTCA CCTTCAACCA GCTCAACAGC TGTTGGTTTC 240
GACGAGAGAA TGTTGCTACA CTCTGAATTC GAAGTGAAGG AACTTCCACA TGTTGAGAGA 300
CCTGACCGTC TTCGAGCTAT AGCTGCCAGT CTTGCCACAG CTGGCGTTTT TCCTGGAAGA 360
TGCTTTCCTA TCCATGCAAG GGAAATCACT AAACAAGAAC TCCAGATGGT ACACACTTCA 420
GAGCATGTTG ATGCTGTTGA TATTACAAGC CAGCTTCACA ATAGGTTTTC ACGTGCTGCT 480
AGACTTGCAG CAGGTTTGTG CGCTGATCTA GCTAAAGAAA TCTTCTCTGG CCGTGTCAAA 540
AATGCTTTCG CTTTGGTTAG ACCCCCAGGT CATCATGCTG GCATCAAAGA TTCTATGGGG 600
TTTTGCCTTC ACAATAATGC AGCTGTTGCT GCTTTAGTTG CACAAGCATT AGGGGCAAAG 660
AAGGTGCTGA TTGTGGACTG GGATGTCCAT CATGGAAATG GAACCCAAGA GATATTCGAA 720
AAAAACAAAT CTGTAATGTA CATTTCCTTG CACAGACATG AAGGAGGAAA ATTATATCCG 780
GGTACTGGAG CTGCTAATGA GTTACGTTGT AGTGGAGTTG GTGACAGAGA CTATATCTAT 840
GCCTTTCAGC ATGTAGTTCT TCCCATTGCG GGATTTGATG CAGCTAAAGG TGACCCACTA 900
GGATGCTGTA AAGTGACTCC GGCTGGTTAT TCTCGAATGA CACAGATGTT GGGTGATCTC 960
TGCGGCGGGA AAATGCTAGT TATTCTCGAG GGCGGTTACA ATCTTCGCTC CATATCTTCT 1020
TCTGCTACAG CAGTGATCAA GGTGCTTCTG GGAGAAAATG CGGAGAACGA CTTGCCTATA 1080
GCTACAGCTC CTCCTTCAAG AGCCTGCCTG CGTACCGTTC TTGATGTAAT GAATATTCAG 1140
ATGAAGTTCT GGCCATCACT TGCTGCCTCC TACTCCAAGT TACTATCAGA GATTCAGAGT 1200
GGGAAGCAAG TAGGCCAGAG AAAAGAGCGG AGCCTAGGAG AGAGGCGGTC GTGA 1255
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0054 Bo3g071540.1 Brassica oleracea 81 4e-169 591
WERAM-Art-0072 AT3G18520.1 Arabidopsis thaliana 75 3e-145 512
WERAM-Arl-0060 fgenesh2_kg.3__ 2057__ AT3G18520.1 Arabidopsis lyrata 76 4e-145 511
WERAM-Pot-0130 POPTR_0012s05730.1 Populus trichocarpa 64 1e-128 456
WERAM-Prp-0050 EMJ11455 Prunus persica 65 3e-128 455
WERAM-Thc-0030 EOY20940 Theobroma cacao 62 7e-125 444
WERAM-Sot-0015 PGSC0003DMT400014582 Solanum tuberosum 64 7e-125 444
WERAM-Sol-0057 Solyc03g119730.2.1 Solanum lycopersicum 64 3e-123 439
WERAM-Viv-0105 VIT_17s0000g04120.t01 Vitis vinifera 63 2e-119 426
WERAM-Met-0113 KEH32089 Medicago truncatula 62 4e-119 425
WERAM-Mua-0121 GSMUA_Achr8P20260_001 Musa acuminata 58 7e-114 407
WERAM-Org-0071 ORGLA07G0034700.1 Oryza glaberrima 62 3e-112 402
WERAM-Orb-0071 OBART07G04070.1 Oryza barthii 62 5e-112 401
WERAM-Amt-0097 ERN15947 Amborella trichopoda 63 4e-111 398
WERAM-Tra-0242 Traes_5DS_18DC37E47.1 Triticum aestivum 62 7e-111 398
WERAM-Glm-0224 GLYMA17G13000.1 Glycine max 60 3e-109 392
WERAM-Orni-0070 ONIVA07G02650.1 Oryza nivara 62 7e-109 391
WERAM-Orp-0068 OPUNC07G03920.1 Oryza punctata 62 1e-108 390
WERAM-Orl-0056 KN539089.1_FGP007 Oryza longistaminata 62 2e-108 389
WERAM-Ors-0064 OS07T0164100-01 Oryza sativa 62 3e-108 389
WERAM-Ori-0081 BGIOSGA024767-PA Oryza indica 62 3e-108 389
WERAM-Orr-0073 ORUFI07G03770.1 Oryza rufipogon 62 3e-108 389
WERAM-Orbr-0079 OB07G13070.1 Oryza brachyantha 62 1e-107 387
WERAM-Orgl-0069 OGLUM07G03480.1 Oryza glumaepatula 62 2e-107 386
WERAM-Lep-0070 LPERR07G03600.1 Leersia perrieri 60 1e-106 384
WERAM-Zem-0064 GRMZM2G107309_P01 Zea mays 60 4e-105 379
WERAM-Sob-0016 Sb02g003690.1 Sorghum bicolor 60 1e-104 377
WERAM-Sem-0039 EFJ31239 Selaginella moellendorffii 58 1e-103 373
WERAM-Hov-0036 MLOC_37038.1 Hordeum vulgare 62 2e-103 373
WERAM-Sei-0111 Si029194m Setaria italica 57 3e-103 372
WERAM-Tru-0033 TRIUR3_17245-P1 Triticum urartu 60 1e-101 367
WERAM-Aet-0038 EMT15178 Aegilops tauschii 60 2e-101 367
WERAM-Php-0023 PP1S145_70V6.1 Physcomitrella patens 50 9e-88 321
WERAM-Brd-0030 BRADI1G56740.2 Brachypodium distachyon 67 1e-74 277
WERAM-Kop-0012 CAY68916 Komagataella pastoris 38 2e-60 230
WERAM-Pof-0022 ENSPFOP00000001799.2 Poecilia formosa 38 4e-59 226
WERAM-Xim-0160 ENSXMAP00000013063.1 Xiphophorus maculatus 39 2e-58 223
WERAM-Orn-0011 ENSONIP00000001061.1 Oreochromis niloticus 38 3e-58 223
WERAM-Ten-0019 ENSTNIP00000004593.1 Tetraodon nigroviridis 39 1e-57 221
WERAM-Coi-0028 EAS30926 Coccidioides immitis 40 3e-57 219
WERAM-Caa-0034 KGT64501 Candida albicans 38 7e-57 218
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 40 1e-56 218
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 38 1e-56 217
WERAM-Orc-0102 ENSOCUP00000008741.3 Oryctolagus cuniculus 39 2e-56 216
WERAM-Mod-0081 ENSMODP00000012731.2 Monodelphis domestica 40 4e-56 216
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 37 5e-56 215
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 40 8e-56 215
WERAM-Asg-0010 AAS51704 Ashbya gossypii 38 1e-55 214
WERAM-Mae-0111 ENSMEUP00000010640.1 Macropus eugenii 39 1e-55 214
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 40 2e-55 214
WERAM-Yal-0023 CAG79971 Yarrowia lipolytica 38 3e-55 213
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 36 4e-55 213
WERAM-Tum-0026 CAZ84932 Tuber melanosporum 38 5e-55 212
WERAM-Zyt-0016 Mycgr3P37223 Zymoseptoria tritici 37 5e-55 212
WERAM-Asm-0181 ENSAMXP00000017644.1 Astyanax mexicanus 39 6e-55 212
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 43 7e-55 212
WERAM-Ran-0201 ENSRNOP00000063689.2 Rattus norvegicus 39 7e-55 211
WERAM-Usm-0012 UM02102P0 Ustilago maydis 37 1e-54 211
WERAM-Dar-0023 ENSDARP00000124246.1 Danio rerio 37 1e-54 211
WERAM-Aim-0139 ENSAMEP00000013236.1 Ailuropoda melanoleuca 39 1e-54 211
WERAM-Tar-0042 ENSTRUP00000010127.1 Takifugu rubripes 40 2e-54 210
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 36 2e-54 210
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 38 2e-54 210
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 39 3e-54 210
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 37 3e-54 209
WERAM-Myl-0104 ENSMLUP00000008295.2 Myotis lucifugus 39 4e-54 209
WERAM-Cag-0018 CAG60803 Candida glabrata 37 4e-54 209
WERAM-Mum-0115 ENSMUSP00000033501.8 Mus musculus 39 6e-54 209
WERAM-Fec-0031 ENSFCAP00000002366.3 Felis catus 38 6e-54 209
WERAM-Mup-0158 ENSMPUP00000013557.1 Mustela putorius furo 39 6e-54 208
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 39 1e-53 207
WERAM-Ict-0125 ENSSTOP00000012693.2 Ictidomys tridecemlineatus 38 1e-53 207
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 37 3e-53 206
WERAM-Miv-0034 MVLG_04888T0 Microbotryum violaceum 35 5e-53 206
WERAM-Eqc-0001 ENSECAP00000001121.1 Equus caballus 38 5e-53 206
WERAM-Orm-0067 OMERI07G02600.4 Oryza meridionalis 66 9e-53 204
WERAM-Xet-0155 ENSXETP00000050501.3 Xenopus tropicalis 36 1e-52 204
WERAM-Ova-0124 ENSOARP00000012678.1 Ovis aries 36 2e-52 204
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 40 2e-52 204
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 36 6e-52 202
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 38 1e-51 201
WERAM-Caf-0161 ENSCAFP00000022990.3 Canis familiaris 38 1e-51 201
WERAM-Sah-0012 ENSSHAP00000001165.1 Sarcophilus harrisii 40 2e-51 201
WERAM-Mao-0002 MGG_01076T0 Magnaporthe oryzae 37 2e-51 200
WERAM-Cae-0060 F41H10.6b Caenorhabditis elegans 38 2e-51 200
WERAM-Lab-0047 EDQ99497 Laccaria bicolor 38 3e-51 199
WERAM-Gag-0014 GGTG_04308T0 Gaeumannomyces graminis 36 7e-51 198
WERAM-Pug-0031 EFP89333 Puccinia graminis 37 1e-50 198
WERAM-Ved-0005 EGY17208 Verticillium dahliae 34 2e-50 197
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 37 2e-50 197
WERAM-Trv-0041 EHK18675 Trichoderma virens 36 3e-50 196
WERAM-Anc-0082 ENSACAP00000007918.3 Anolis carolinensis 36 5e-50 196
WERAM-Bot-0122 ENSBTAP00000017618.5 Bos taurus 36 5e-50 196
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 37 1e-49 194
WERAM-Otg-0144 ENSOGAP00000012420.2 Otolemur garnettii 38 1e-49 194
WERAM-Chg-0033 EAQ86725 Chaetomium globosum 37 1e-49 194
WERAM-Sus-0177 ENSSSCP00000022636.1 Sus scrofa 38 1e-49 194
WERAM-Osl-0043 ABO96923 Ostreococcus lucimarinus 36 2e-49 194
WERAM-Cap-0109 ENSCPOP00000008049.2 Cavia porcellus 34 2e-49 193
WERAM-Orla-0013 ENSORLP00000001341.1 Oryzias latipes 33 4e-49 192
WERAM-Aso-0015 CADAORAP00001816 Aspergillus oryzae 39 5e-49 192
WERAM-Nec-0012 EFNCRP00000001681 Neurospora crassa 37 5e-49 192
WERAM-Mam-0153 ENSMMUP00000021637.2 Macaca mulatta 37 9e-49 191
WERAM-Paa-0049 ENSPANP00000006915.1 Papio anubis 37 1e-48 191
WERAM-Chs-0158 ENSCSAP00000009365.1 Chlorocebus sabaeus 37 1e-48 191
WERAM-Gog-0047 ENSGGOP00000004443.2 Gorilla gorilla 37 1e-48 191
WERAM-Hos-0047 ENSP00000365804.2 Homo sapiens 37 1e-48 191
WERAM-Caj-0022 ENSCJAP00000004409.2 Callithrix jacchus 37 1e-48 191
WERAM-Meg-0084 ENSMGAP00000008226.2 Meleagris gallopavo 34 1e-48 191
WERAM-Gaga-0067 ENSGALP00000010190.4 Gallus gallus 35 2e-48 191
WERAM-Map-0033 MAPG_10880T0 Magnaporthe poae 34 2e-48 190
WERAM-Loa-0047 ENSLAFP00000003196.3 Loxodonta africana 35 2e-48 190
WERAM-Fia-0117 ENSFALP00000010126.1 Ficedula albicollis 34 3e-48 190
WERAM-Fuo-0035 FOXG_13914P0 Fusarium oxysporum 35 3e-48 189
WERAM-Pes-0124 ENSPSIP00000014863.1 Pelodiscus sinensis 35 5e-48 189
WERAM-Dan-0022 ENSDNOP00000002136.3 Dasypus novemcinctus 37 5e-48 189
WERAM-Anp-0022 ENSAPLP00000003127.1 Anas platyrhynchos 35 5e-48 189
WERAM-Tag-0054 ENSTGUP00000003859.1 Taeniopygia guttata 36 7e-48 188
WERAM-Trr-0039 EGR46026 Trichoderma reesei 35 9e-48 188
WERAM-Put-0014 PTTG_07163P0 Puccinia triticina 36 2e-47 187
WERAM-Prc-0036 ENSPCAP00000003334.1 Procavia capensis 36 3e-47 186
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 34 3e-47 186
WERAM-Tut-0056 ENSTTRP00000004443.1 Tursiops truncatus 35 3e-47 186
WERAM-Asfu-0010 CADAFUAP00002902 Aspergillus fumigatus 36 5e-47 186
WERAM-Phn-0010 SNOT_01279 Phaeosphaeria nodorum 40 1e-46 184
WERAM-Nol-0005 ENSNLEP00000000692.2 Nomascus leucogenys 36 1e-46 184
WERAM-Gam-0051 ENSGMOP00000005244.1 Gadus morhua 34 2e-46 184
WERAM-Gaa-0030 ENSGACP00000005071.1 Gasterosteus aculeatus 34 2e-46 184
WERAM-Pat-0122 ENSPTRP00000025053.4 Pan troglodytes 36 2e-46 183
WERAM-Leo-0082 ENSLOCP00000011105.1 Lepisosteus oculatus 34 2e-46 183
WERAM-Poa-0196 ENSPPYP00000022747.2 Pongo abelii 36 4e-46 182
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 32 5e-46 182
WERAM-Ptv-0077 ENSPVAP00000007213.1 Pteropus vampyrus 37 9e-46 181
Created Date 25-Jun-2016