Tag |
Content |
WERAM ID |
WERAM-Gam-0130 |
Ensembl Protein ID |
ENSGMOP00000013657.1 |
Gene Name |
hdac4 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
1.10e-108 |
363.4 |
52 |
892 |
HDAC |
Class-I |
5.50e-20 |
72.3 |
572 |
773 |
|
Organism |
Gadus morhua |
Domain Profile |
HDAC Class-II
class-2.txt 54 atkeelqlvHseehvelletae.klekeelesltvdsdsiyl 94 +++e l+l H++e++e+ ++ e + ++e+e+++ ++ + l ENSGMOP00000013657.1 52 QQQELLALKHQQELLEHQRKMEsHRMEQEMEKQQREQKLLLL 93 455666777888888888777766667777765555444433 PP class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 +glvyd+ m khq++++n+++hpE+++Riq+i+srlqe+gl+ ++e++++rka++eelq+vHse+hv l++t+ +k + ++ ENSGMOP00000013657.1 554 TGLVYDSLMQKHQCMCGNTNSHPEHAGRIQSIWSRLQETGLRAQCECIRGRKASLEELQTVHSEAHVLLYGTNPLRQKLDCKRsvtpmf 642 79***********************************************************************544444444489**** PP class-2.txt 85 .......ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkil 166 ++vdsd+i++e++s++aarlavG+v+elv kv++gelkngfavvRPPGHHaeest+mGFC+fn+va+aa+llqq+l+v++il ENSGMOP00000013657.1 643 vrlpcggVGVDSDTIWNEVHSSSAARLAVGSVVELVLKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAARLLQQRLSVNRIL 731 ***************************************************************************************** PP class-2.txt 167 ivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavde 212 ivDwDvHhGnGtq++fy+dp+vlylS+HRyd+g+ffp gsga+de ENSGMOP00000013657.1 732 IVDWDVHHGNGTQQAFYDDPNVLYLSIHRYDDGNFFP--GSGAPDE 775 *************************************..9999987 PP class-2.txt 279 kcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 +++lt+ql++laggrvvl+lEGG++l+ai++a+ea+v aLlg ENSGMOP00000013657.1 849 XXFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVAALLG 892 579***************************************96 PP
HDAC Class-I
class-1.txt 17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae....elskelkkf...nvgedc.Pvfdg 97 +++hp r++ + + + + gl + e ++ +kas eel+++hse+++ + + ++ +++ + + +vg d+ + ++ ENSGMOP00000013657.1 572 TNSHPEHAGRIQSIWSRLQETGLRAQCECIRGRKASLEELQTVHSEAHVLLYGTNPLRQKLdckrSVTPMFVRLpcgGVGVDSdTIWNE 660 568899999999999999999************************99986554333333222222333333333222566665236677 PP class-1.txt 98 lfey..cqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveeafy 180 +++ ++l G+ +e + k+ ++e + a+ G hha s Gfcy n + +a l++ + +r+l +d d+hhG+g ++afy ENSGMOP00000013657.1 661 VHSSsaARLAVGSVVELVLKVATGELKngFAVVRPPG-HHAEESTPMGFCYFNSVAIAARLLQQrlSVNRILIVDWDVHHGNGTQQAFY 748 7654114567888899999999887661255555555.*******************987776645789******************** PP class-1.txt 181 ttdrvmtvsfhkyge.effPgtGdl 204 v+ +s+h+y++ +ffPg+G ENSGMOP00000013657.1 749 DDPNVLYLSIHRYDDgNFFPGSGAP 773 *************9746*****975 PP
|
Protein Sequence (Fasta) | LSLSLSLSLV DINSALPLRL PPAAIPMDLR VGLPCPPWAS SPLGLPCLLP QQQQELLALK 60 HQQELLEHQR KMESHRMEQE MEKQQREQKL LLLKNKERGQ ESAVASTEVK MRLQEFVLNK 120 KKALAQRSIN QGGIPNDAPY WYRKTQHSSL DQSSPPQTGL SPYNHPVLGV YNPRDDFPLR 180 KTASEPNLKL RSRLKQKVSE RRSSPLLRRR DSPITAAKKR SLDMADSVCS SAPGSGPSSP 240 NNNSSSNIPN ENGIAVCSSA EVSLAQRLSS SSADGGSLSQ LSLYCSPSLP NITLGLPATS 300 TPSPAANXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 360 XXXXXXXGLS IPSAAASMSK LQRQHRPLGR TQSAPLPQGS ATPPHAQVLA LQQLHLNKMM 420 GKPCEAGVVR QHQSHPEETE EELREQQDTE GGALPAGVSV KQEPPDPQEL LEEGPWDMER 480 QSDHELLFRQ ALLLEQQRIH QLRNYQASME AAGLSITFPG HRPLSRAQSS PASAPSFPLS 540 VAPPDPPAKT HFTTGLVYDS LMQKHQCMCG NTNSHPEHAG RIQSIWSRLQ ETGLRAQCEC 600 IRGRKASLEE LQTVHSEAHV LLYGTNPLRQ KLDCKRSVTP MFVRLPCGGV GVDSDTIWNE 660 VHSSSAARLA VGSVVELVLK VATGELKNGF AVVRPPGHHA EESTPMGFCY FNSVAIAARL 720 LQQRLSVNRI LIVDWDVHHG NGTQQAFYDD PNVLYLSIHR YDDGNFFPGS GAPDEXXXXX 780 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 840 XXXXXXXXXX FGHLTRQLMT LAGGRVVLAL EGGHDLTAIC DASEACVAAL LGQELDPLPK 900 AVLEQRPNPN AVRSLGKVIE VHSKYWRAVQ RCNQLGLSLL EAKRGDSEEA ETVHAMASLS 960 VANSNAMEHR QQEEPMEEGE PL 982Protein Fasta Sequence
>ENSGMOP00000013657.1|Class-I|Gadus morhua LSLSLSLSLVDINSALPLRLPPAAIPMDLRVGLPCPPWASSPLGLPCLLPQQQQELLALKHQQELLEHQRKMESHRMEQEMEKQQREQKLLLLKNKERGQESAVASTEVKMRLQEFVLNKKKALAQRSINQGGIPNDAPYWYRKTQHSSLDQSSPPQTGLSPYNHPVLGVYNPRDDFPLRKTASEPNLKLRSRLKQKVSERRSSPLLRRRDSPITAAKKRSLDMADSVCSSAPGSGPSSPNNNSSSNIPNENGIAVCSSAEVSLAQRLSSSSADGGSLSQLSLYCSPSLPNITLGLPATSTPSPAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLSIPSAAASMSKLQRQHRPLGRTQSAPLPQGSATPPHAQVLALQQLHLNKMMGKPCEAGVVRQHQSHPEETEEELREQQDTEGGALPAGVSVKQEPPDPQELLEEGPWDMERQSDHELLFRQALLLEQQRIHQLRNYQASMEAAGLSITFPGHRPLSRAQSSPASAPSFPLSVAPPDPPAKTHFTTGLVYDSLMQKHQCMCGNTNSHPEHAGRIQSIWSRLQETGLRAQCECIRGRKASLEELQTVHSEAHVLLYGTNPLRQKLDCKRSVTPMFVRLPCGGVGVDSDTIWNEVHSSSAARLAVGSVVELVLKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAARLLQQRLSVNRILIVDWDVHHGNGTQQAFYDDPNVLYLSIHRYDDGNFFPGSGAPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVAALLGQELDPLPKAVLEQRPNPNAVRSLGKVIEVHSKYWRAVQRCNQLGLSLLEAKRGDSEEAETVHAMASLSVANSNAMEHRQQEEPMEEGEPL
|
Nucleotide Sequence (Fasta) | CTCTCTCTCT CTCTCTCTCT CTCTCTAGTG GACATCAACT CCGCCCTTCC GCTGCGTCTC 60 CCTCCGGCTG CCATCCCCAT GGACCTCCGG GTGGGTCTCC CATGTCCCCC CTGGGCCAGC 120 AGCCCCCTGG GCCTCCCATG TCTCCTTCCG CAGCAGCAGC AGGAGCTGCT GGCCTTGAAG 180 CACCAGCAGG AGCTGCTTGA GCACCAGAGG AAGATGGAGA GCCACCGGAT GGAGCAGGAG 240 ATGGAGAAGC AGCAGCGGGA GCAGAAGCTG CTGCTGCTGA AGAACAAGGA GCGGGGACAA 300 GAGAGTGCGG TGGCAAGCAC AGAGGTGAAG ATGCGTCTGC AGGAGTTCGT CCTGAACAAG 360 AAGAAAGCAC TGGCCCAGCG CAGCATCAAC CAGGGAGGAA TCCCCAACGA CGCCCCCTAC 420 TGGTACCGGA AAACCCAGCA CAGTTCTCTG GATCAGAGCT CGCCCCCCCA GACGGGCCTG 480 TCCCCCTACA ACCACCCCGT CCTGGGGGTG TACAACCCCC GAGACGACTT CCCCCTGCGC 540 AAGACCGCGT CGGAGCCCAA CCTGAAGCTG CGCTCCAGGC TGAAGCAGAA GGTGAGTGAG 600 AGGCGGAGCA GCCCACTCCT ACGGCGCCGC GACAGCCCCA TCACCGCCGC CAAGAAACGC 660 TCGCTGGATA TGGCAGACTC TGTTTGTAGC AGTGCTCCCG GCTCTGGCCC CAGCTCCCCG 720 AACAACAACA GCTCCTCTAA TATCCCCAAC GAGAACGGCA TCGCTGTGTG CTCCAGCGCC 780 GAGGTGTCCT TGGCCCAGCG GCTGAGCAGC AGCAGTGCGG ACGGGGGCTC CCTCAGCCAG 840 CTGTCCCTAT ACTGCTCCCC CTCCCTGCCT AACATCACCC TGGGCCTGCC CGCCACCTCC 900 ACGCCCAGCC CTGCCGCCAA CNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 960 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1020 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1080 NNNNNNNNNN NNNNNNNNNN NGGACTCTCC ATCCCGTCGG CGGCAGCCTC GATGTCTAAG 1140 CTCCAGCGGC AGCACCGGCC CCTGGGGCGG ACCCAGTCGG CGCCCCTGCC CCAGGGCAGC 1200 GCCACGCCCC CCCACGCCCA GGTGCTGGCC CTGCAGCAGC TGCACCTCAA CAAGATGATG 1260 GGTAAGCCGT GCGAGGCGGG CGTGGTCCGG CAGCACCAGA GCCACCCAGA GGAGACGGAG 1320 GAGGAGCTGA GGGAGCAGCA GGACACCGAG GGGGGAGCCC TCCCCGCCGG GGTCAGCGTC 1380 AAACAGGAGC CCCCCGACCC CCAGGAGCTC TTGGAGGAGG GGCCCTGGGA CATGGAGAGG 1440 CAGTCGGACC ATGAGCTGCT CTTCAGACAG GCCCTCCTAT TGGAGCAGCA GAGGATTCAC 1500 CAGCTGAGGA ACTACCAGGC GTCCATGGAG GCTGCCGGCC TGTCAATCAC CTTCCCCGGG 1560 CACCGCCCCC TCTCCCGCGC CCAATCATCT CCTGCCTCCG CCCCCTCCTT CCCCCTCAGT 1620 GTCGCGCCCC CCGACCCGCC CGCCAAAACT CACTTCACTA CAGGCCTGGT GTACGACTCC 1680 CTGATGCAGA AGCACCAATG CATGTGTGGG AACACCAACA GCCACCCGGA GCACGCCGGG 1740 CGCATCCAGA GCATCTGGTC GCGACTGCAG GAGACGGGGC TGCGGGCGCA GTGTGAGTGT 1800 ATCCGGGGGA GGAAGGCTAG TTTGGAGGAG CTCCAGACTG TCCACTCTGA AGCGCACGTC 1860 CTGCTGTACG GAACCAACCC TCTACGGCAG AAACTGGACT GTAAGCGCTC TGTCACGCCC 1920 ATGTTCGTCA GGCTGCCCTG CGGAGGAGTG GGGGTGGACA GTGACACCAT ATGGAATGAG 1980 GTGCACTCAT CCAGCGCGGC ACGGCTAGCG GTCGGCTCTG TGGTGGAACT GGTGCTGAAG 2040 GTGGCCACCG GGGAGCTGAA GAACGGCTTC GCCGTTGTCC GACCTCCCGG ACATCACGCC 2100 GAGGAGAGCA CTCCCATGGG ATTCTGTTAT TTCAACTCAG TGGCGATCGC TGCAAGGCTG 2160 CTGCAGCAGC GACTCAGCGT CAACAGAATC CTCATCGTGG ACTGGGACGT TCACCATGGC 2220 AACGGCACCC AGCAGGCATT CTACGACGAC CCCAACGTCC TCTACCTGTC CATCCATCGC 2280 TATGACGACG GGAACTTCTT CCCCGGCAGC GGAGCACCCG ATGAGNNNNN NNNNNNNNNN 2340 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2400 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2460 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2520 NNNNNNNNNN NNNNNNNNNN NNNNNNNNGT TTCGGTCACC TGACCCGTCA GCTGATGACC 2580 CTCGCCGGGG GGAGGGTGGT TCTGGCGTTG GAGGGGGGTC ACGACCTCAC CGCAATCTGT 2640 GACGCTTCGG AGGCTTGTGT GGCTGCCCTG CTGGGCCAGG AGCTGGATCC GCTGCCCAAG 2700 GCGGTCCTGG AGCAGCGGCC CAACCCCAAC GCCGTCCGAT CCCTGGGGAA GGTCATCGAG 2760 GTGCACAGTA AGTACTGGCG TGCTGTGCAG CGCTGCAACC AGCTGGGTCT CTCCCTGCTG 2820 GAGGCCAAGC GAGGCGACTC GGAGGAGGCA GAGACCGTCC ACGCCATGGC CTCGCTCTCT 2880 GTTGCCAATA GCAACGCTAT GGAGCACAGG CAACAGGAGG AACCAATGGA AGAGGGGGAA 2940 CCACTGTAG
Nucleotide Fasta Sequence
>ENSGMOP00000013657.1|Class-I|Gadus morhua CTCTCTCTCTCTCTCTCTCTCTCTCTAGTGGACATCAACTCCGCCCTTCCGCTGCGTCTCCCTCCGGCTGCCATCCCCATGGACCTCCGGGTGGGTCTCCCATGTCCCCCCTGGGCCAGCAGCCCCCTGGGCCTCCCATGTCTCCTTCCGCAGCAGCAGCAGGAGCTGCTGGCCTTGAAGCACCAGCAGGAGCTGCTTGAGCACCAGAGGAAGATGGAGAGCCACCGGATGGAGCAGGAGATGGAGAAGCAGCAGCGGGAGCAGAAGCTGCTGCTGCTGAAGAACAAGGAGCGGGGACAAGAGAGTGCGGTGGCAAGCACAGAGGTGAAGATGCGTCTGCAGGAGTTCGTCCTGAACAAGAAGAAAGCACTGGCCCAGCGCAGCATCAACCAGGGAGGAATCCCCAACGACGCCCCCTACTGGTACCGGAAAACCCAGCACAGTTCTCTGGATCAGAGCTCGCCCCCCCAGACGGGCCTGTCCCCCTACAACCACCCCGTCCTGGGGGTGTACAACCCCCGAGACGACTTCCCCCTGCGCAAGACCGCGTCGGAGCCCAACCTGAAGCTGCGCTCCAGGCTGAAGCAGAAGGTGAGTGAGAGGCGGAGCAGCCCACTCCTACGGCGCCGCGACAGCCCCATCACCGCCGCCAAGAAACGCTCGCTGGATATGGCAGACTCTGTTTGTAGCAGTGCTCCCGGCTCTGGCCCCAGCTCCCCGAACAACAACAGCTCCTCTAATATCCCCAACGAGAACGGCATCGCTGTGTGCTCCAGCGCCGAGGTGTCCTTGGCCCAGCGGCTGAGCAGCAGCAGTGCGGACGGGGGCTCCCTCAGCCAGCTGTCCCTATACTGCTCCCCCTCCCTGCCTAACATCACCCTGGGCCTGCCCGCCACCTCCACGCCCAGCCCTGCCGCCAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGACTCTCCATCCCGTCGGCGGCAGCCTCGATGTCTAAGCTCCAGCGGCAGCACCGGCCCCTGGGGCGGACCCAGTCGGCGCCCCTGCCCCAGGGCAGCGCCACGCCCCCCCACGCCCAGGTGCTGGCCCTGCAGCAGCTGCACCTCAACAAGATGATGGGTAAGCCGTGCGAGGCGGGCGTGGTCCGGCAGCACCAGAGCCACCCAGAGGAGACGGAGGAGGAGCTGAGGGAGCAGCAGGACACCGAGGGGGGAGCCCTCCCCGCCGGGGTCAGCGTCAAACAGGAGCCCCCCGACCCCCAGGAGCTCTTGGAGGAGGGGCCCTGGGACATGGAGAGGCAGTCGGACCATGAGCTGCTCTTCAGACAGGCCCTCCTATTGGAGCAGCAGAGGATTCACCAGCTGAGGAACTACCAGGCGTCCATGGAGGCTGCCGGCCTGTCAATCACCTTCCCCGGGCACCGCCCCCTCTCCCGCGCCCAATCATCTCCTGCCTCCGCCCCCTCCTTCCCCCTCAGTGTCGCGCCCCCCGACCCGCCCGCCAAAACTCACTTCACTACAGGCCTGGTGTACGACTCCCTGATGCAGAAGCACCAATGCATGTGTGGGAACACCAACAGCCACCCGGAGCACGCCGGGCGCATCCAGAGCATCTGGTCGCGACTGCAGGAGACGGGGCTGCGGGCGCAGTGTGAGTGTATCCGGGGGAGGAAGGCTAGTTTGGAGGAGCTCCAGACTGTCCACTCTGAAGCGCACGTCCTGCTGTACGGAACCAACCCTCTACGGCAGAAACTGGACTGTAAGCGCTCTGTCACGCCCATGTTCGTCAGGCTGCCCTGCGGAGGAGTGGGGGTGGACAGTGACACCATATGGAATGAGGTGCACTCATCCAGCGCGGCACGGCTAGCGGTCGGCTCTGTGGTGGAACTGGTGCTGAAGGTGGCCACCGGGGAGCTGAAGAACGGCTTCGCCGTTGTCCGACCTCCCGGACATCACGCCGAGGAGAGCACTCCCATGGGATTCTGTTATTTCAACTCAGTGGCGATCGCTGCAAGGCTGCTGCAGCAGCGACTCAGCGTCAACAGAATCCTCATCGTGGACTGGGACGTTCACCATGGCAACGGCACCCAGCAGGCATTCTACGACGACCCCAACGTCCTCTACCTGTCCATCCATCGCTATGACGACGGGAACTTCTTCCCCGGCAGCGGAGCACCCGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTCGGTCACCTGACCCGTCAGCTGATGACCCTCGCCGGGGGGAGGGTGGTTCTGGCGTTGGAGGGGGGTCACGACCTCACCGCAATCTGTGACGCTTCGGAGGCTTGTGTGGCTGCCCTGCTGGGCCAGGAGCTGGATCCGCTGCCCAAGGCGGTCCTGGAGCAGCGGCCCAACCCCAACGCCGTCCGATCCCTGGGGAAGGTCATCGAGGTGCACAGTAAGTACTGGCGTGCTGTGCAGCGCTGCAACCAGCTGGGTCTCTCCCTGCTGGAGGCCAAGCGAGGCGACTCGGAGGAGGCAGAGACCGTCCACGCCATGGCCTCGCTCTCTGTTGCCAATAGCAACGCTATGGAGCACAGGCAACAGGAGGAACCAATGGAAGAGGGGGAACCACTGTAG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |