WERAM Information


Tag Content
WERAM ID WERAM-Pem-0075
Ensembl Protein ID ENSPMAP00000008483.1
Gene Name hdac9b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPMAG00000007698.1 ENSPMAT00000008521.1 ENSPMAP00000008483.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 2.10e-118 394.4 55 905
HDAC Class-I 1.20e-31 109.7 36 902
Organism Petromyzon marinus
Domain Profile
  HDAC Class-II

           class-2.txt 49 lkarkatkeelqlvHseehvelletaeklekeele 83
l++ + + +e+++ H++e+ ++l+ +++el
ENSPMAP00000008483.1 55 LAEFQRKYQEMNQQHQSELQDRLQVLALRQQQELL 89
33334444444444444444444333322222221 PP
class-2.txt 51 ark.atkeelqlvHseehvelletaeklekeelesltvdsdsi 92
+r+ + +e+ q +H+++ + +l+++++ ++++l+sl+++ ++
ENSPMAP00000008483.1 531 ERErQAEEQQQVLHTRQNIFMLSEQSNNKQRHLQSLMEQPETP 573
4330445556778*********999999999999988877665 PP
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84
+g+vyd+ m++hq+ ++++++hpE+++Ri ai+ rlq++gll+k+e +++rka+++++q+vHse hv +++t+ +l++++l++
ENSPMAP00000008483.1 607 TGVVYDTLMVRHQCSCGDDSNHPEHAGRIMAIWARLQQTGLLSKCEVIAGRKASLKDIQTVHSELHVLRYGTN-PLNRQKLDTqgllda 694
79***********************************************************************.*************** PP
class-2.txt 85 ............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk 161
++vdsd+ + + +s +aar+a+G+v++l+++v++g+lkngfa+vRPPGHHaees+ mGFC+fn+va+aakll+q+l+
ENSPMAP00000008483.1 695 qptqlmllrcggVGVDSDTYWSDAHSGSAARMAAGSVTTLAFHVASGQLKNGFAIVRPPGHHAEESAVMGFCVFNSVAIAAKLLLQELH 783
***************************************************************************************** PP
class-2.txt 162 vkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlp 247
v++ilivD+DvHhGnGtq++fy+dp+vlylSlHRyd+g+ffp gsga +evg g+gegf+vNv+w+ggl mgda+ylaafr+vv+p
ENSPMAP00000008483.1 784 VRRILIVDLDVHHGNGTQQAFYNDPRVLYLSLHRYDNGNFFP--GSGASSEVGVGPGEGFTVNVSWTGGLdppMGDADYLAAFRTVVMP 870
******************************************..********************************************* PP
class-2.txt 248 iakeFkPdlvlvsaGfDaaeg..dplgglsvtakc 280
ia eF+Pd+vlvsaGfDa +g +lgg+++ta+c
ENSPMAP00000008483.1 871 IAMEFEPDVVLVSAGFDALDGhpPQLGGYKLTASC 905
*********************76679******998 PP

  HDAC Class-I

           class-1.txt 27 lsltheLv.lnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeel 79
ls+ e++ n++l+++l + + +++e+ + h+ e + l+ +++el
ENSPMAP00000008483.1 36 LSMDMEMLrRNHQLQQQLLLA-EFQRKYQEMNQQHQSELQDRLQVLALRQQQEL 88
455444442566777777554.56678899999999877777776665555544 PP
class-1.txt 17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyi.....eflkkvepenae........elskelkkfnvgedc 92
+++hp r++ + + + gl k e++ +kas ++++++hse ++ + l++ + +++ + + +v++d+
ENSPMAP00000008483.1 625 DSNHPEHAGRIMAIWARLQQTGLLSKCEVIAGRKASLKDIQTVHSELHVlrygtNPLNRQKLDTQGlldaqptqLMLLRCGGVGVDSDT 713
56888888888888888889999999999999999999999999875542222244666666665555433211111223334555555 PP
class-1.txt 93 PvfdglfeycqlitGasl.eaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgve 176
d ++ ++ +s+ + a ++ +++ + ai G hha s Gfc n + +a ll+ + +r+l +d+d+hhG+g +
ENSPMAP00000008483.1 714 YWSDAHSGSAARMAAGSVtTLAFHVASGQLKngFAIVRPPG-HHAEESAVMGFCVFNSVAIAAKLLLQelHVRRILIVDLDVHHGNGTQ 801
55566665555555555515566777766542267766666.9********************9999965668**************** PP
class-1.txt 177 eafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDsla 260
+afy+ rv+ +s+h+y++ +ffPg+G s+vg++ g ++vnv + g+d D y + f++v+ ++ feP++v++ G D+l
ENSPMAP00000008483.1 802 QAFYNDPRVLYLSLHRYDNgNFFPGSGASSEVGVGPGEGFTVNVSWTGGLDppmgDADYLAAFRTVVMPIAMEFEPDVVLVSAGFDALD 890
*****************8746***********************998887666669********************************9 PP
class-1.txt 261 gD..rlgefnls 270
g +lg ++l+
ENSPMAP00000008483.1 891 GHppQLGGYKLT 902
863358888887 PP

Protein Sequence
(Fasta)
AGALPSSVRP ELEAVFRGPP LEQRGPDPRS SLHQQLSMDM EMLRRNHQLQ QQLLLAEFQR 60
KYQEMNQQHQ SELQDRLQVL ALRQQQELLE RQLMQEQERD RLRKMQQLEL NAIKRKDKDQ 120
NSAVASPAVR KHLQQFVKSS FFLLFNKNYN RCCVSNPRLY KPPPPTAVLH QRQPRESGTT 180
ISQGNGSGPT ALGGPSTSEG RGNYPLRRIA SEPILKVRSK LRQRVIEMRY TPLPLNSKPL 240
CDASAGRKPA EGLDALPSDS APGSEQSSPN SSYSNIVKLN GTTGSVPNIH GEHALALAIN 300
REQSVSHPNL FTSPSLPNIS LGLPQSPSQG ASVLSTQQEA ERQAILAVRQ GGALTGQFLA 360
STPLPTQLPL AGPEPDGQHS LMYPYFTQST ATPPKGRLVG CVGVVPGVAV APQAGLRAAP 420
THRTVSRTHS APLPQAPQGL QHMVLERGHG MSEASHLGQQ WKSYDHPRLA HMEDELSPLR 480
PAFGPGGVAG VPHLAATVVS GGPGPSSPPQ MVAIKQEPRE EEGQLGERVD ERERQAEEQQ 540
QVLHTRQNIF MLSEQSNNKQ RHLQSLMEQP ETPWGLGAHL PLTRARSSPA HYPSPLPPEP 600
NRPSFSTGVV YDTLMVRHQC SCGDDSNHPE HAGRIMAIWA RLQQTGLLSK CEVIAGRKAS 660
LKDIQTVHSE LHVLRYGTNP LNRQKLDTQG LLDAQPTQLM LLRCGGVGVD SDTYWSDAHS 720
GSAARMAAGS VTTLAFHVAS GQLKNGFAIV RPPGHHAEES AVMGFCVFNS VAIAAKLLLQ 780
ELHVRRILIV DLDVHHGNGT QQAFYNDPRV LYLSLHRYDN GNFFPGSGAS SEVGVGPGEG 840
FTVNVSWTGG LDPPMGDADY LAAFRTVVMP IAMEFEPDVV LVSAGFDALD GHPPQLGGYK 900
LTASC 905
Nucleotide Sequence
(Fasta)
GCAGGCGCCC TGCCCTCGAG CGTGCGGCCC GAGCTGGAGG CAGTGTTCCG GGGGCCCCCC 60
CTGGAGCAGC GGGGCCCCGA CCCGCGCTCC TCGCTGCACC AGCAGCTCAG CATGGACATG 120
GAGATGCTGC GCCGGAACCA CCAGTTGCAG CAGCAGCTGC TGCTCGCCGA GTTCCAGCGC 180
AAGTACCAGG AGATGAACCA GCAGCATCAG TCCGAGCTGC AGGACCGCCT GCAGGTGCTG 240
GCGCTGCGAC AGCAGCAGGA GTTGTTGGAG AGGCAGTTGA TGCAGGAGCA GGAGAGAGAT 300
CGGCTGAGGA AAATGCAGCA GCTGGAGCTC AATGCTATAA AACGCAAGGA TAAGGACCAG 360
AACAGTGCCG TGGCCAGTCC TGCCGTCAGG AAACACCTCC AGCAGTTTGT CAAGAGCAGT 420
TTTTTTTTAC TTTTTAACAA GAATTACAAT AGGTGTTGCG TCTCGAACCC ACGTCTATAT 480
AAACCCCCCC CCCCCACCGC TGTGCTCCAT CAACGGCAGC CCCGTGAGTC TGGCACGACC 540
ATCTCACAGG GCAATGGATC AGGCCCCACG GCACTAGGGG GACCCAGCAC ATCCGAGGGC 600
AGAGGCAACT ACCCCCTCCG CAGAATAGCC TCGGAACCCA TCCTCAAGGT GCGCTCCAAG 660
CTGAGACAGC GTGTAATCGA GATGCGCTAC ACCCCGCTCC CACTGAACTC CAAGCCTCTG 720
TGTGACGCCT CCGCGGGGAG GAAGCCTGCA GAAGGGCTGG ACGCTCTGCC ATCCGACAGC 780
GCCCCGGGCT CTGAGCAGAG TTCACCCAAC AGCAGCTACA GCAACATCGT GAAGCTGAAC 840
GGCACTACAG GATCTGTACC CAACATCCAC GGAGAGCACG CATTGGCGTT GGCAATAAAC 900
CGGGAGCAGT CCGTGAGTCA CCCCAACCTA TTCACATCTC CATCCCTTCC GAACATCTCT 960
CTGGGCCTCC CGCAGTCCCC ATCGCAGGGT GCTTCGGTGC TCAGCACGCA GCAGGAGGCG 1020
GAGAGGCAGG CCATCCTGGC AGTGCGCCAG GGCGGCGCCC TCACCGGCCA GTTCCTTGCC 1080
AGCACGCCAC TGCCCACACA GCTGCCCCTC GCCGGGCCCG AGCCCGATGG CCAGCACAGC 1140
CTCATGTACC CCTACTTTAC ACAGTCGACG GCCACTCCAC CTAAAGGCAG GCTCGTGGGC 1200
TGCGTGGGCG TGGTACCAGG TGTGGCCGTC GCCCCCCAGG CTGGCCTGCG CGCGGCTCCC 1260
ACCCACCGCA CTGTTAGCCG GACACACTCG GCGCCGCTGC CCCAGGCCCC CCAGGGCCTC 1320
CAGCACATGG TTCTCGAGCG GGGTCATGGA ATGTCAGAGG CATCGCACTT AGGGCAGCAA 1380
TGGAAAAGCT ATGACCATCC GCGGCTTGCG CACATGGAGG ACGAGCTGAG CCCGCTGCGG 1440
CCTGCCTTCG GTCCCGGCGG CGTGGCCGGG GTCCCGCATC TGGCGGCGAC GGTGGTGAGC 1500
GGCGGCCCCG GCCCCTCTTC GCCTCCCCAG ATGGTGGCCA TAAAGCAGGA GCCCCGGGAA 1560
GAGGAGGGGC AGCTGGGCGA GCGGGTAGAC GAGAGGGAGC GGCAGGCGGA GGAGCAGCAG 1620
CAGGTGTTGC ACACCAGACA GAACATTTTC ATGTTATCTG AGCAATCAAA TAATAAACAA 1680
CGGCACTTGC AGTCACTGAT GGAGCAGCCG GAGACGCCGT GGGGCCTGGG CGCGCACCTC 1740
CCGCTGACGC GCGCACGCTC TTCGCCGGCG CACTACCCCT CTCCCCTGCC TCCTGAGCCC 1800
AACCGGCCGT CCTTCTCCAC CGGCGTCGTG TACGACACCC TGATGGTGCG GCACCAGTGC 1860
AGCTGCGGCG ACGACAGCAA CCACCCCGAG CACGCGGGGC GCATCATGGC GATCTGGGCG 1920
CGCCTGCAGC AGACGGGGCT GCTCAGCAAG TGCGAGGTGA TCGCGGGGCG CAAGGCCTCG 1980
CTCAAGGACA TCCAGACGGT GCACTCGGAG CTCCACGTGC TGCGTTATGG CACCAACCCT 2040
CTCAACCGCC AGAAACTGGA CACACAGGGC CTGCTCGACG CTCAGCCGAC ACAGCTCATG 2100
CTGCTGCGGT GCGGGGGCGT TGGGGTCGAC AGCGACACGT ACTGGAGCGA CGCTCATTCG 2160
GGCAGCGCAG CACGCATGGC GGCCGGCTCC GTCACCACGC TCGCCTTCCA CGTTGCGTCG 2220
GGGCAACTCA AGAATGGCTT TGCAATCGTC CGCCCGCCCG GCCATCACGC CGAGGAGTCT 2280
GCCGTGATGG GTTTCTGCGT CTTCAATTCG GTGGCGATCG CAGCGAAGCT ACTCCTGCAG 2340
GAGCTGCATG TGCGCAGGAT CCTCATCGTC GATCTGGATG TGCACCATGG TAACGGCACA 2400
CAGCAGGCAT TCTACAACGA CCCCAGGGTC CTCTATCTTT CCCTCCATCG CTATGACAAC 2460
GGAAACTTCT TCCCCGGCAG CGGGGCGTCC AGCGAGGTGG GCGTGGGGCC GGGAGAGGGA 2520
TTCACAGTGA ACGTGTCGTG GACCGGTGGG CTGGACCCCC CCATGGGGGA CGCCGACTAC 2580
CTCGCCGCCT TCCGGACGGT GGTGATGCCC ATCGCAATGG AGTTTGAGCC GGACGTGGTG 2640
CTGGTCTCGG CCGGGTTCGA CGCGCTGGAT GGACACCCGC CGCAGCTCGG GGGGTACAAG 2700
CTCACCGCCT CCTGT 2716
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 45 2e-173 607
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 45 3e-173 606
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 45 1e-171 601
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 46 1e-171 601
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 45 2e-171 600
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 45 1e-170 597
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 45 2e-170 597
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 45 2e-169 593
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 44 4e-162 569
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 42 1e-159 561
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 49 2e-149 527
WERAM-Orc-0142 ENSOCUP00000012429.3 Oryctolagus cuniculus 41 7e-148 522
WERAM-Pes-0105 ENSPSIP00000013270.1 Pelodiscus sinensis 43 1e-147 521
WERAM-Caj-0009 ENSCJAP00000001947.2 Callithrix jacchus 42 5e-147 519
WERAM-Loa-0142 ENSLAFP00000012719.4 Loxodonta africana 40 2e-146 517
WERAM-Poa-0116 ENSPPYP00000014905.2 Pongo abelii 42 3e-146 516
WERAM-Mam-0041 ENSMMUP00000007984.2 Macaca mulatta 41 1e-144 511
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 63 9e-144 508
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 63 4e-142 503
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 62 5e-142 502
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 62 7e-142 502
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 62 2e-141 501
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 62 2e-141 500
WERAM-Lac-0191 ENSLACP00000021749.1 Latimeria chalumnae 44 4e-141 499
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 62 4e-141 499
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 66 1e-140 498
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 62 2e-140 498
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 63 2e-140 497
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 62 3e-140 497
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 65 5e-139 493
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 65 2e-138 491
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 62 2e-137 487
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 62 3e-137 487
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 61 9e-137 485
WERAM-Dio-0038 ENSDORP00000004330.1 Dipodomys ordii 39 4e-134 476
WERAM-Orn-0049 ENSONIP00000005635.1 Oreochromis niloticus 66 5e-134 476
WERAM-Tar-0063 ENSTRUP00000012899.1 Takifugu rubripes 67 3e-133 473
WERAM-Leo-0044 ENSLOCP00000006280.1 Lepisosteus oculatus 62 3e-133 473
WERAM-Pof-0029 ENSPFOP00000001978.1 Poecilia formosa 61 6e-132 469
WERAM-Ten-0103 ENSTNIP00000011743.1 Tetraodon nigroviridis 66 7e-132 469
WERAM-Xim-0022 ENSXMAP00000002092.1 Xiphophorus maculatus 61 1e-131 468
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 71 2e-131 468
WERAM-Gaa-0020 ENSGACP00000002894.1 Gasterosteus aculeatus 67 2e-131 467
WERAM-Mod-0016 ENSMODP00000001749.3 Monodelphis domestica 66 3e-131 467
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 64 3e-131 466
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 70 9e-131 465
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 65 4e-129 459
WERAM-Eqc-0153 ENSECAP00000016533.1 Equus caballus 69 2e-128 457
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 65 3e-128 457
WERAM-Mae-0089 ENSMEUP00000008883.1 Macropus eugenii 59 4e-128 456
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 69 8e-128 455
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 69 3e-127 453
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 63 5e-127 452
WERAM-Dan-0156 ENSDNOP00000017844.1 Dasypus novemcinctus 71 4e-126 449
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 71 4e-126 449
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 71 4e-126 449
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 71 2e-125 447
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 65 1e-115 415
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 59 9e-113 405
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 58 4e-109 393
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 62 2e-108 391
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 70 5e-106 383
WERAM-Ect-0068 ENSETEP00000007698.1 Echinops telfairi 51 7e-102 369
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 50 9e-98 355
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 51 3e-89 327
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 71 8e-79 293
WERAM-Brr-0068 Bra012984.1-P Brassica rapa 46 1e-67 255
WERAM-Bro-0134 Bo7g098310.1 Brassica oleracea 46 3e-67 254
WERAM-Art-0146 AT5G61060.1 Arabidopsis thaliana 46 5e-66 250
WERAM-Thc-0031 EOY22062 Theobroma cacao 44 3e-65 248
WERAM-Arl-0149 scaffold_802745.1 Arabidopsis lyrata 45 6e-65 246
WERAM-Lep-0079 LPERR07G18450.1 Leersia perrieri 44 3e-64 244
WERAM-Orbr-0087 OB07G26850.1 Oryza brachyantha 43 9e-64 243
WERAM-Glm-0045 GLYMA05G00460.1 Glycine max 43 5e-63 240
WERAM-Viv-0107 VIT_17s0000g07280.t01 Vitis vinifera 43 6e-63 239
WERAM-Pot-0045 POPTR_0004s09180.1 Populus trichocarpa 43 7e-63 239
WERAM-Orgl-0076 OGLUM07G21150.1 Oryza glumaepatula 43 7e-63 239
WERAM-Ori-0088 BGIOSGA026083-PA Oryza indica 43 8e-63 239
WERAM-Ors-0072 OS07T0602200-01 Oryza sativa 43 8e-63 239
WERAM-Orr-0082 ORUFI07G22240.1 Oryza rufipogon 43 8e-63 239
WERAM-Orni-0078 ONIVA07G19970.1 Oryza nivara 43 9e-63 239
WERAM-Sei-0109 Si029091m Setaria italica 43 1e-62 239
WERAM-Org-0078 ORGLA07G0164500.1 Oryza glaberrima 43 1e-62 239
WERAM-Orb-0079 OBART07G21300.1 Oryza barthii 43 2e-62 238
Created Date 25-Jun-2016