Tag |
Content |
WERAM ID |
WERAM-Pat-0185 |
Ensembl Protein ID |
ENSPTRP00000037550.5 |
Gene Name |
HDAC6 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
1.40e-226 |
750.6 |
86 |
729 |
HDAC |
Class-I |
5.50e-55 |
187.1 |
91 |
706 |
|
Organism |
Pan troglodytes |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeelesltvdsd 90 +glv+de+ ++ ++l++++ pE eR++ai ++l ++gll+++++++ar a+keel+lvHs e+++l+et++ +++ el++l+ ++d ENSPTRP00000037550.5 86 TGLVLDEQLNEFHCLWDDS--FPEGLERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYD 172 6899*****9999999988..******************************************************************** PP class-2.txt 91 siylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtq 179 s+yl+++s+++a la G+vl+lvd+vl +e++ng+a++RPPGHHa++s ++G+C+fn+vavaa+++qqk+++++ livDwDvHhG+Gtq ENSPTRP00000037550.5 173 SVYLHPNSYSCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRFLIVDWDVHHGQGTQ 261 ***************************************************************************************** PP class-2.txt 180 eifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaeg 268 +f +dp+vly+S+HRy++g+f+p+++ ++++++g g+g+g+++Nv+wn+ +m+da+y+aaf +v+lp+a eF+P+lvlv+aGfDa +g ENSPTRP00000037550.5 262 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQG 350 ***************************************************************************************** PP class-2.txt 269 dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 dp+g++ t++++a+lt+ l++lagg+++l lEGGynl+a+ae+v+a++++Llg ENSPTRP00000037550.5 351 DPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLG 404 ****************************************************96 PP class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeelesltvdsd 90 +glvyd++m++h +l++++ hpE p+Ri +i+ rl+e gl++++++l+ r at+ el+++Hs+e+v +l+ +ek++++el+++++++d ENSPTRP00000037550.5 481 TGLVYDQNMMNHCNLWDSH--HPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHSAEYVGHLRATEKMKTRELHRESSNFD 567 79*************9999..******************************************************************** PP class-2.txt 91 siylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk.vkkilivDwDvHhGnGt 178 siy+ ++++++a+la+Ga+++lv++vl+ge+ ng avvRPPGHHae+++a+GFC+fn+vavaa+++q + +ilivDwDvHhGnGt ENSPTRP00000037550.5 568 SIYICPSTFACAQLATGAACRLVEAVLSGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGhALRILIVDWDVHHGNGT 656 *******************************************************************9776599*************** PP class-2.txt 179 qeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiake 251 q++f++dp+vly+SlHRyd+g+ffp+ ++ga +++g+++g+gf+vNvawng mgda+ylaa++++vlpia+e ENSPTRP00000037550.5 657 QHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWHRLVLPIAYE 729 **********************************************************************986 PP
HDAC Class-I
class-1.txt 8 dedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPv 94 de++ e+h +++ p +rl+ ++e +++ gl + ++++ a++eel+ +hs eyi+++++ + n+ el ++ + ENSPTRP00000037550.5 91 DEQLNEFHClwDDSFPEGLERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYDS---VYL 176 67777887644778888889999999999999********************************9999999888877777754...445 PP class-1.txt 95 fdglfeycqlitGasleaakkLnkk..eadiainwaGGlhhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDgveeaf 179 + ++ + l +G+ l+ ++ + ++ +ai G hha++s G+c n + +a ++kh +r l +d d+hhG g + +f ENSPTRP00000037550.5 177 HPNSYSCACLASGSVLRLVDAVLGAeiRNGMAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHriRRFLIVDWDVHHGQGTQFTF 264 56778888888888888887765441145688877776.9******************9987777652379****************** PP class-1.txt 180 yttdrvmtvsfhkygee.ffPg..tGdlsdvgaekgkyyavnvPlkd.gidDesyekifksviskvieafePeavvlqcGaDslagDrl 264 + v+ s+h+y+++ f+P + + s +g ++g+ y++nvP ++ g++D y + f +v+ +v f+P+ v++ G D+l+gD+ ENSPTRP00000037550.5 265 DQDPSVLYFSIHRYEQGrFWPHlkASNWSTTGFGQGQGYTINVPWNQvGMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPK 353 **************986388853378999***************97659**************************************** PP class-1.txt 265 gefnlsikghaecvkfvksf.nlpllvlGGGGYtlrnva 302 ge + g+a+ +++ +l++ GGY+lr +a ENSPTRP00000037550.5 354 GEMAATPAGFAQLTHLLMGLaGGKLILSLEGGYNLRALA 392 ***************9999945556666689***99887 PP class-1.txt 7 ydedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcP 93 yd+++ ++ +++hp +p+r+ + + + gl + ++p+ a+ +ell++hs ey+ +l+ e+ +++el++e+++f+ + cP ENSPTRP00000037550.5 485 YDQNMMNHCNlwDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHSAEYVGHLRATEKMKTRELHRESSNFDSIYICP 573 555555543223889***********999*****************************************************9999999 PP class-1.txt 94 vfdglfeycqlitGasleaakkLnkkea.diainwaGGlhhakkseasGfcyvnDivlailellk...khkrvlyididlhhGDgveea 178 f +ql tGa+ + ++ + ++e + a hha ++ a Gfc+ n + +a + + + r+l +d d+hhG+g ++ ENSPTRP00000037550.5 574 ---STFACAQLATGAACRLVEAVLSGEVlNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAisgHALRILIVDWDVHHGNGTQHM 659 ...56999**********998877666514444555666******************99865443222778****************** PP class-1.txt 179 fyttdrvmtvsfhkyge.effP..gtGdlsdvgaekgkyyavnvPlk 222 f+ v+ vs+h+y++ +ffP G s++g g ++vnv + ENSPTRP00000037550.5 660 FEDDPSVLYVSLHRYDHgTFFPmgDEGASSQIGRAAGTGFTVNVAWN 706 ***************973599943368899*************9765 PP
|
Protein Sequence (Fasta) | MTSTGQDSTT TRQRRSRQNP QSPPQDSSVT SKRNIKKGAV PRSIPNLAEV KKKGKMKKLG 60 QAMEEDLIVG LQGMELNLEA EALAGTGLVL DEQLNEFHCL WDDSFPEGLE RLHAIKEQLI 120 QEGLLDRCVS FQARFAEKEE LMLVHSLEYI DLMETTQYMN EGELRVLADT YDSVYLHPNS 180 YSCACLASGS VLRLVDAVLG AEIRNGMAII RPPGHHAQHS LMDGYCMFNH VAVAARYAQQ 240 KHRIRRFLIV DWDVHHGQGT QFTFDQDPSV LYFSIHRYEQ GRFWPHLKAS NWSTTGFGQG 300 QGYTINVPWN QVGMRDADYI AAFLHVLLPV ALEFQPQLVL VAAGFDALQG DPKGEMAATP 360 AGFAQLTHLL MGLAGGKLIL SLEGGYNLRA LAEGVSASLH TLLGDPCPML ESPGAPCRSA 420 QASVSCALEA LEPFWEVLVR STETVERDNM EEDNVEESEE EGPWEPPVLP ILTWPVLQSR 480 TGLVYDQNMM NHCNLWDSHH PEVPQRILRI MCRLEELGLA GRCLTLTPRP ATEAELLTCH 540 SAEYVGHLRA TEKMKTRELH RESSNFDSIY ICPSTFACAQ LATGAACRLV EAVLSGEVLN 600 GAAVVRPPGH HAEQDAACGF CFFNSVAVAA RHAQAISGHA LRILIVDWDV HHGNGTQHMF 660 EDDPSVLYVS LHRYDHGTFF PMGDEGASSQ IGRAAGTGFT VNVAWNGPRM GDADYLAAWH 720 RLVLPIAYE 729Protein Fasta Sequence
>ENSPTRP00000037550.5|Class-I|Pan troglodytes MTSTGQDSTTTRQRRSRQNPQSPPQDSSVTSKRNIKKGAVPRSIPNLAEVKKKGKMKKLGQAMEEDLIVGLQGMELNLEAEALAGTGLVLDEQLNEFHCLWDDSFPEGLERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRFLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVLVRSTETVERDNMEEDNVEESEEEGPWEPPVLPILTWPVLQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHSAEYVGHLRATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVLSGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWHRLVLPIAYE
|
Nucleotide Sequence (Fasta) | GTGGAGTCGA AACCGGGGTC GAGGCCGGGG CCGGCTGAGT GAAAGGGTGG GTGATTATCC 60 CGGGAGATAG GCCGAAAGGG CGGAACCGCG GCAGGGGCCA AGCCTCCTCA ACTATGACCT 120 CAACCGGCCA GGATTCCACC ACAACCAGGC AGCGAAGAAG TAGGCAGAAC CCCCAGTCGC 180 CCCCTCAGGA CTCCAGTGTC ACTTCGAAGC GAAATATTAA AAAGGGAGCC GTTCCCCGCT 240 CTATCCCCAA TCTAGCGGAG GTAAAGAAGA AAGGCAAAAT GAAGAAGCTC GGCCAAGCAA 300 TGGAAGAAGA CCTAATCGTG GGACTGCAAG GGATGGAGCT GAACCTTGAG GCTGAAGCAC 360 TGGCTGGCAC TGGCTTGGTG TTGGATGAGC AGCTAAATGA ATTCCATTGC CTCTGGGATG 420 ACAGCTTCCC GGAAGGCCTT GAGCGGCTCC ATGCCATCAA GGAGCAACTG ATCCAGGAGG 480 GCCTCCTAGA TCGCTGCGTG TCCTTTCAGG CCCGGTTTGC TGAAAAGGAA GAGCTGATGT 540 TGGTTCACAG CCTAGAATAT ATTGATCTGA TGGAAACAAC CCAGTACATG AATGAGGGAG 600 AACTCCGTGT CCTAGCAGAC ACCTACGACT CAGTTTATCT GCATCCGAAC TCATACTCCT 660 GTGCCTGCCT GGCCTCAGGC TCTGTCCTCA GGCTGGTGGA TGCGGTCCTG GGGGCTGAGA 720 TCCGGAATGG CATGGCCATC ATTAGGCCTC CTGGACATCA CGCCCAGCAC AGTCTTATGG 780 ATGGCTATTG CATGTTCAAC CACGTGGCTG TGGCAGCCCG CTATGCTCAA CAGAAACACC 840 GCATCCGGAG GTTCCTTATC GTAGATTGGG ATGTGCACCA CGGTCAAGGA ACACAGTTCA 900 CNTTCGACCA GGACCCCAGT GTCCTCTATT TCTCCATCCA CCGCTACGAG CAGGGTAGGT 960 TCTGGCCCCA CCTGAAGGCC TCTAACTGGT CCACCACAGG TTTCGGCCAA GGCCAAGGAT 1020 ATACCATCAA TGTGCCTTGG AACCAGGTGG GGATGCGGGA TGCTGACTAC ATTGCTGCTT 1080 TCCTGCACGT CCTGCTGCCA GTCGCCCTCG AGTTCCAGCC TCAGCTGGTC CTGGTGGCTG 1140 CTGGATTTGA TGCCCTGCAA GGGGACCCCA AGGGTGAGAT GGCCGCCACT CCGGCAGGGT 1200 TCGCCCAACT AACCCACCTG CTCATGGGTC TGGCAGGAGG CAAGCTGATC CTGTCTCTGG 1260 AGGGTGGCTA CAACCTCCGC GCCCTGGCTG AAGGCGTCAG TGCTTCGCTC CACACCCTTC 1320 TGGGAGACCC TTGCCCCATG CTGGAGTCAC CTGGTGCCCC CTGCCGGAGT GCCCAGGCTT 1380 CAGTTTCCTG TGCTCTGGAA GCCCTTGAGC CCTTCTGGGA GGTTCTTGTG AGATCAACTG 1440 AGACCGTGGA GAGGGACAAC ATGGAGGAGG ACAATGTAGA GGAGAGCGAG GAGGAAGGAC 1500 CCTGGGAGCC CCCTGTGCTC CCAATCCTGA CATGGCCAGT GCTACAGTCT CGCACAGGGC 1560 TGGTCTATGA CCAAAATATG ATGAATCACT GCAACTTGTG GGACAGCCAC CACCCTGAGG 1620 TACCCCAGCG CATCTTGCGG ATCATGTGCC GTCTGGAGGA GCTGGGCCTT GCCGGGCGCT 1680 GCCTCACCCT GACACCGCGC CCTGCCACAG AGGCTGAGCT GCTCACCTGT CACAGTGCTG 1740 AGTACGTGGG TCATCTCCGG GCCACAGAGA AAATGAAAAC CCGGGAGCTG CACCGTGAGA 1800 GTTCCAACTT TGACTCCATC TATATCTGCC CCAGTACCTT CGCCTGTGCA CAGCTTGCCA 1860 CTGGCGCTGC CTGCCGCCTG GTGGAGGCTG TGCTCTCAGG AGAGGTTCTG AATGGTGCTG 1920 CTGTGGTGCG TCCCCCAGGA CACCACGCAG AGCAGGATGC AGCTTGCGGT TTTTGCTTTT 1980 TCAACTCTGT GGCTGTGGCT GCTCGCCATG CCCAGGCTAT CAGTGGGCAT GCCCTACGGA 2040 TCCTGATTGT GGATTGGGAT GTCCACCACG GTAATGGAAC TCAGCACATG TTTGAGGATG 2100 ACCCCAGTGT GCTATATGTG TCCCTGCACC GCTATGATCA TGGCACCTTC TTCCCCATGG 2160 GGGATGAGGG TGCCAGCAGC CAGATCGGCC GGGCTGCGGG CACAGGCTTC ACCGTCAACG 2220 TGGCATGGAA CGGGCCCCGC ATGGGTGACG CTGACTACCT AGCTGCCTGG CATCGCCTGG 2280 TGCTTCCCAT TGCCTACGAG
2301Nucleotide Fasta Sequence
>ENSPTRP00000037550.5|Class-I|Pan troglodytes GTGGAGTCGAAACCGGGGTCGAGGCCGGGGCCGGCTGAGTGAAAGGGTGGGTGATTATCCCGGGAGATAGGCCGAAAGGGCGGAACCGCGGCAGGGGCCAAGCCTCCTCAACTATGACCTCAACCGGCCAGGATTCCACCACAACCAGGCAGCGAAGAAGTAGGCAGAACCCCCAGTCGCCCCCTCAGGACTCCAGTGTCACTTCGAAGCGAAATATTAAAAAGGGAGCCGTTCCCCGCTCTATCCCCAATCTAGCGGAGGTAAAGAAGAAAGGCAAAATGAAGAAGCTCGGCCAAGCAATGGAAGAAGACCTAATCGTGGGACTGCAAGGGATGGAGCTGAACCTTGAGGCTGAAGCACTGGCTGGCACTGGCTTGGTGTTGGATGAGCAGCTAAATGAATTCCATTGCCTCTGGGATGACAGCTTCCCGGAAGGCCTTGAGCGGCTCCATGCCATCAAGGAGCAACTGATCCAGGAGGGCCTCCTAGATCGCTGCGTGTCCTTTCAGGCCCGGTTTGCTGAAAAGGAAGAGCTGATGTTGGTTCACAGCCTAGAATATATTGATCTGATGGAAACAACCCAGTACATGAATGAGGGAGAACTCCGTGTCCTAGCAGACACCTACGACTCAGTTTATCTGCATCCGAACTCATACTCCTGTGCCTGCCTGGCCTCAGGCTCTGTCCTCAGGCTGGTGGATGCGGTCCTGGGGGCTGAGATCCGGAATGGCATGGCCATCATTAGGCCTCCTGGACATCACGCCCAGCACAGTCTTATGGATGGCTATTGCATGTTCAACCACGTGGCTGTGGCAGCCCGCTATGCTCAACAGAAACACCGCATCCGGAGGTTCCTTATCGTAGATTGGGATGTGCACCACGGTCAAGGAACACAGTTCACNTTCGACCAGGACCCCAGTGTCCTCTATTTCTCCATCCACCGCTACGAGCAGGGTAGGTTCTGGCCCCACCTGAAGGCCTCTAACTGGTCCACCACAGGTTTCGGCCAAGGCCAAGGATATACCATCAATGTGCCTTGGAACCAGGTGGGGATGCGGGATGCTGACTACATTGCTGCTTTCCTGCACGTCCTGCTGCCAGTCGCCCTCGAGTTCCAGCCTCAGCTGGTCCTGGTGGCTGCTGGATTTGATGCCCTGCAAGGGGACCCCAAGGGTGAGATGGCCGCCACTCCGGCAGGGTTCGCCCAACTAACCCACCTGCTCATGGGTCTGGCAGGAGGCAAGCTGATCCTGTCTCTGGAGGGTGGCTACAACCTCCGCGCCCTGGCTGAAGGCGTCAGTGCTTCGCTCCACACCCTTCTGGGAGACCCTTGCCCCATGCTGGAGTCACCTGGTGCCCCCTGCCGGAGTGCCCAGGCTTCAGTTTCCTGTGCTCTGGAAGCCCTTGAGCCCTTCTGGGAGGTTCTTGTGAGATCAACTGAGACCGTGGAGAGGGACAACATGGAGGAGGACAATGTAGAGGAGAGCGAGGAGGAAGGACCCTGGGAGCCCCCTGTGCTCCCAATCCTGACATGGCCAGTGCTACAGTCTCGCACAGGGCTGGTCTATGACCAAAATATGATGAATCACTGCAACTTGTGGGACAGCCACCACCCTGAGGTACCCCAGCGCATCTTGCGGATCATGTGCCGTCTGGAGGAGCTGGGCCTTGCCGGGCGCTGCCTCACCCTGACACCGCGCCCTGCCACAGAGGCTGAGCTGCTCACCTGTCACAGTGCTGAGTACGTGGGTCATCTCCGGGCCACAGAGAAAATGAAAACCCGGGAGCTGCACCGTGAGAGTTCCAACTTTGACTCCATCTATATCTGCCCCAGTACCTTCGCCTGTGCACAGCTTGCCACTGGCGCTGCCTGCCGCCTGGTGGAGGCTGTGCTCTCAGGAGAGGTTCTGAATGGTGCTGCTGTGGTGCGTCCCCCAGGACACCACGCAGAGCAGGATGCAGCTTGCGGTTTTTGCTTTTTCAACTCTGTGGCTGTGGCTGCTCGCCATGCCCAGGCTATCAGTGGGCATGCCCTACGGATCCTGATTGTGGATTGGGATGTCCACCACGGTAATGGAACTCAGCACATGTTTGAGGATGACCCCAGTGTGCTATATGTGTCCCTGCACCGCTATGATCATGGCACCTTCTTCCCCATGGGGGATGAGGGTGCCAGCAGCCAGATCGGCCGGGCTGCGGGCACAGGCTTCACCGTCAACGTGGCATGGAACGGGCCCCGCATGGGTGACGCTGACTACCTAGCTGCCTGGCATCGCCTGGTGCTTCCCATTGCCTACGAG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |