Tag |
Content |
WERAM ID |
WERAM-Orl-0040 |
Ensembl Protein ID |
KN538895.1_FGP007 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
1.60e-111 |
373.3 |
2 |
278 |
HDAC |
Class-I |
1.80e-36 |
126.9 |
2 |
269 |
|
Organism |
Oryza longistaminata |
Domain Profile |
HDAC Class-II
class-2.txt 50 karkatkeelqlvHseehvelletae.klekeelesltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeesta 140 ka++a+++ +++vHs++h++l+++ + k +++ ++++ +++siy+++ s+++a la+G+v+e+++kv++gel+ ++a+vRPPGHHae+++a KN538895.1_FGP007 2 KAKEAEDKYIASVHSQNHIKLMRSISsKEYDSRRNKIARKFNSIYFNKGSSESAFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEA 93 7899********************998888999999******************************************************** PP class-2.txt 141 mGFClfnnvavaakllqqklk...vkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawng 229 mGFClfnnva+aa +l+++ + +kkilivDwDvHhGnGtq++fy+dp+vl++S+HR+d gsf+p+ g++++ +geg+g+g+n+Nv+w++ KN538895.1_FGP007 94 MGFCLFNNVAIAADYLLNERTdlgIKKILIVDWDVHHGNGTQKMFYSDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEH 185 ****************99877777******************************************************************** PP class-2.txt 230 glmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLl 321 g++gda+y+aa+++v+lp+a+ F+Pd+vlvsaGfDaa gdplgg+++t+++ya l +ll++a+gr+v++lEGGynl++ia++v+a++k+Ll KN538895.1_FGP007 186 GKCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAQGRIVMALEGGYNLRSIANSVSACAKVLL 277 *******************************************************************************************9 PP class-2.txt 322 g 322 g KN538895.1_FGP007 278 G 278 6 PP
HDAC Class-I
class-1.txt 47 kpkkasaeellkfhseeyieflkkvepenaeels.kelkkfnvgedcPvfdglfeycqlitGasleaakkLnkkeadiainwa.GGlhhakk 136 k+k+a+ ++++++hs+++i++++++++++ ++ k +kfn +g e + l +G+ +e a+k+ +e ai hha + KN538895.1_FGP007 2 KAKEAEDKYIASVHSQNHIKLMRSISSKEYDSRRnKIARKFNSI---YFNKGSSESAFLAAGSVIEVAEKVAAGELSSAIALVrPPGHHAEH 90 689999********************999887662556778743...4557888999999*************99888887641456***** PP class-1.txt 137 seasGfcyvnDivlailellkk.....hkrvlyididlhhGDgveeafyttdrvmtvsfhkyge.effPgtGdlsd..vgaekgkyyavnvP 220 +ea Gfc n++ +a ll + k++l +d d+hhG+g ++ fy rv+ s+h+++ +f+P+ Gd s +g+++gk y +nvP KN538895.1_FGP007 91 NEAMGFCLFNNVAIAADYLLNErtdlgIKKILIVDWDVHHGNGTQKMFYSDPRVLFFSVHRFDYgSFYPAEGDASYcfIGEGDGKGYNINVP 182 ***************99998742233369********************************98525*******986447999********** PP class-1.txt 221 lkdg.idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGGGGYtlrnvaRcw 305 ++g + D y + +v+ +v eaf+P++v++ G D+ gD+lg ++ +g+a + + f + +++ GGY+lr +a KN538895.1_FGP007 183 WEHGkCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFaQGRIVMALEGGYNLRSIANSV 269 ***9899**************************************************999999996778888889******999765 PP
|
Protein Sequence (Fasta) | MKAKEAEDKY IASVHSQNHI KLMRSISSKE YDSRRNKIAR KFNSIYFNKG SSESAFLAAG 60 SVIEVAEKVA AGELSSAIAL VRPPGHHAEH NEAMGFCLFN NVAIAADYLL NERTDLGIKK 120 ILIVDWDVHH GNGTQKMFYS DPRVLFFSVH RFDYGSFYPA EGDASYCFIG EGDGKGYNIN 180 VPWEHGKCGD ADYIAAWDHV LLPVAEAFNP DIVLVSAGFD AALGDPLGGC CITPNGYALL 240 LTKLLGFAQG RIVMALEGGY NLRSIANSVS ACAKVLLGDK FRFDTPDMQP FESSWRVIQA 300 LYSSGSDSEV EDLPDAIASV NIIQITDGII SESLSKLNLD EDKIATKTTS SNVMVEGSFE 360 PQNDGSAAVS TEGISSLSST WRSELSKVYV WYASFGSNMW TPRFLCYIQG GKAEGMNIPC 420 FGSHDTSPPR GSMWKTVPHR LFFGRSSTPC WGTGGVAFLN PEINHTENSY VCMYKITLEQ 480 FNDVLFQENR LVKENGESGK TESPDSPLIG LSEIEFVSRN KGVHLAPIKD SWYSNVLYLG 540 EEDNLPILTM TCPSSDVERC RSGELPLCPP SKTYSATLIR GLMEGKHLDA DAAASYINTA 600 ATRGL 605Protein Fasta Sequence
>KN538895.1_FGP007|Class-I|Oryza longistaminata MKAKEAEDKYIASVHSQNHIKLMRSISSKEYDSRRNKIARKFNSIYFNKGSSESAFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTDLGIKKILIVDWDVHHGNGTQKMFYSDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEHGKCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAQGRIVMALEGGYNLRSIANSVSACAKVLLGDKFRFDTPDMQPFESSWRVIQALYSSGSDSEVEDLPDAIASVNIIQITDGIISESLSKLNLDEDKIATKTTSSNVMVEGSFEPQNDGSAAVSTEGISSLSSTWRSELSKVYVWYASFGSNMWTPRFLCYIQGGKAEGMNIPCFGSHDTSPPRGSMWKTVPHRLFFGRSSTPCWGTGGVAFLNPEINHTENSYVCMYKITLEQFNDVLFQENRLVKENGESGKTESPDSPLIGLSEIEFVSRNKGVHLAPIKDSWYSNVLYLGEEDNLPILTMTCPSSDVERCRSGELPLCPPSKTYSATLIRGLMEGKHLDADAAASYINTAATRGL
|
Nucleotide Sequence (Fasta) | ATGAAAGCGA AGGAAGCTGA GGACAAGTAT ATAGCTTCTG TCCATAGCCA GAACCATATC 60 AAGCTGATGA GGAGTATCAG CTCAAAAGAA TATGATTCCC GTCGAAACAA GATTGCTAGA 120 AAATTTAATT CCATTTACTT CAACAAGGGC TCCTCAGAGT CTGCTTTTCT TGCAGCTGGT 180 TCTGTGATTG AGGTAGCTGA GAAGGTTGCT GCAGGAGAGT TAAGTTCTGC TATTGCTCTA 240 GTCCGACCTC CAGGTCACCA TGCTGAACAT AATGAGGCAA TGGGTTTTTG CCTCTTCAAC 300 AATGTAGCAA TTGCTGCTGA TTATCTCTTA AATGAGAGGA CTGACTTAGG TATCAAGAAG 360 ATATTGATTG TCGATTGGGA TGTTCATCAT GGAAATGGCA CACAAAAGAT GTTTTATAGT 420 GATCCTCGTG TATTGTTCTT TTCAGTTCAC AGATTTGATT ATGGCAGCTT CTATCCTGCT 480 GAAGGGGATG CATCTTACTG TTTCATTGGG GAAGGAGATG GTAAAGGGTA CAACATTAAC 540 GTGCCCTGGG AACATGGAAA ATGTGGTGAT GCAGATTATA TTGCTGCATG GGACCATGTA 600 CTACTTCCTG TTGCTGAAGC ATTTAACCCT GATATAGTCT TGGTGTCTGC TGGGTTTGAT 660 GCAGCACTGG GTGATCCTCT TGGTGGCTGC TGCATCACTC CCAATGGATA TGCTCTGCTA 720 CTGACAAAGC TCTTAGGTTT TGCCCAAGGG AGGATAGTGA TGGCTCTTGA AGGAGGCTAT 780 AACCTTAGAT CCATAGCAAA TTCAGTTAGT GCTTGTGCTA AAGTTTTGTT GGGAGACAAG 840 TTCAGATTTG ACACTCCTGA TATGCAACCG TTTGAATCTT CATGGAGAGT TATACAAGCG 900 CTGTATTCTT CTGGTTCTGA CTCTGAAGTT GAAGATCTCC CTGATGCTAT TGCTTCTGTC 960 AATATTATTC AAATTACTGA TGGTATTATA AGTGAAAGCC TCTCAAAGTT GAACCTTGAT 1020 GAAGACAAAA TCGCAACAAA GACCACCTCA AGTAATGTAA TGGTTGAAGG TTCATTTGAA 1080 CCACAAAATG ATGGATCTGC TGCGGTGTCA ACTGAAGGAA TATCATCTCT ATCTTCTACT 1140 TGGAGATCAG AACTGTCAAA AGTATATGTT TGGTATGCCA GCTTTGGTTC AAACATGTGG 1200 ACACCAAGGT TTCTGTGCTA CATCCAAGGG GGAAAGGCTG AGGGTATGAA TATACCATGT 1260 TTTGGATCTC ATGACACAAG CCCACCAAGA GGTTCCATGT GGAAGACTGT GCCTCATAGA 1320 TTGTTTTTTG GTAGATCCTC TACTCCTTGC TGGGGAACTG GTGGTGTTGC TTTTCTCAAC 1380 CCTGAGATAA ACCACACTGA GAACTCCTAT GTCTGCATGT ATAAAATAAC GCTCGAGCAG 1440 TTCAATGATG TATTGTTTCA AGAGAATCGT TTAGTGAAGG AGAACGGCGA AAGTGGAAAA 1500 ACTGAGTCTC CTGACTCTCC TTTGATTGGC TTGTCTGAAA TAGAGTTTGT TTCCAGAAAC 1560 AAGGGTGTCC ACCTTGCACC TATTAAGGAT AGCTGGTACT CCAATGTACT TTACCTTGGG 1620 GAGGAGGATA ACCTTCCAAT TCTTACAATG ACATGCCCGT CATCAGACGT TGAGCGATGC 1680 AGATCCGGAG AGCTGCCATT GTGTCCTCCA TCCAAGACCT ACTCCGCCAC CCTGATAAGG 1740 GGACTAATGG AAGGGAAGCA CCTGGATGCA GATGCGGCCG CTAGTTACAT CAACACTGCA 1800 GCTACCAGAG GCCTGTGA
1819Nucleotide Fasta Sequence
>KN538895.1_FGP007|Class-I|Oryza longistaminata ATGAAAGCGAAGGAAGCTGAGGACAAGTATATAGCTTCTGTCCATAGCCAGAACCATATCAAGCTGATGAGGAGTATCAGCTCAAAAGAATATGATTCCCGTCGAAACAAGATTGCTAGAAAATTTAATTCCATTTACTTCAACAAGGGCTCCTCAGAGTCTGCTTTTCTTGCAGCTGGTTCTGTGATTGAGGTAGCTGAGAAGGTTGCTGCAGGAGAGTTAAGTTCTGCTATTGCTCTAGTCCGACCTCCAGGTCACCATGCTGAACATAATGAGGCAATGGGTTTTTGCCTCTTCAACAATGTAGCAATTGCTGCTGATTATCTCTTAAATGAGAGGACTGACTTAGGTATCAAGAAGATATTGATTGTCGATTGGGATGTTCATCATGGAAATGGCACACAAAAGATGTTTTATAGTGATCCTCGTGTATTGTTCTTTTCAGTTCACAGATTTGATTATGGCAGCTTCTATCCTGCTGAAGGGGATGCATCTTACTGTTTCATTGGGGAAGGAGATGGTAAAGGGTACAACATTAACGTGCCCTGGGAACATGGAAAATGTGGTGATGCAGATTATATTGCTGCATGGGACCATGTACTACTTCCTGTTGCTGAAGCATTTAACCCTGATATAGTCTTGGTGTCTGCTGGGTTTGATGCAGCACTGGGTGATCCTCTTGGTGGCTGCTGCATCACTCCCAATGGATATGCTCTGCTACTGACAAAGCTCTTAGGTTTTGCCCAAGGGAGGATAGTGATGGCTCTTGAAGGAGGCTATAACCTTAGATCCATAGCAAATTCAGTTAGTGCTTGTGCTAAAGTTTTGTTGGGAGACAAGTTCAGATTTGACACTCCTGATATGCAACCGTTTGAATCTTCATGGAGAGTTATACAAGCGCTGTATTCTTCTGGTTCTGACTCTGAAGTTGAAGATCTCCCTGATGCTATTGCTTCTGTCAATATTATTCAAATTACTGATGGTATTATAAGTGAAAGCCTCTCAAAGTTGAACCTTGATGAAGACAAAATCGCAACAAAGACCACCTCAAGTAATGTAATGGTTGAAGGTTCATTTGAACCACAAAATGATGGATCTGCTGCGGTGTCAACTGAAGGAATATCATCTCTATCTTCTACTTGGAGATCAGAACTGTCAAAAGTATATGTTTGGTATGCCAGCTTTGGTTCAAACATGTGGACACCAAGGTTTCTGTGCTACATCCAAGGGGGAAAGGCTGAGGGTATGAATATACCATGTTTTGGATCTCATGACACAAGCCCACCAAGAGGTTCCATGTGGAAGACTGTGCCTCATAGATTGTTTTTTGGTAGATCCTCTACTCCTTGCTGGGGAACTGGTGGTGTTGCTTTTCTCAACCCTGAGATAAACCACACTGAGAACTCCTATGTCTGCATGTATAAAATAACGCTCGAGCAGTTCAATGATGTATTGTTTCAAGAGAATCGTTTAGTGAAGGAGAACGGCGAAAGTGGAAAAACTGAGTCTCCTGACTCTCCTTTGATTGGCTTGTCTGAAATAGAGTTTGTTTCCAGAAACAAGGGTGTCCACCTTGCACCTATTAAGGATAGCTGGTACTCCAATGTACTTTACCTTGGGGAGGAGGATAACCTTCCAATTCTTACAATGACATGCCCGTCATCAGACGTTGAGCGATGCAGATCCGGAGAGCTGCCATTGTGTCCTCCATCCAAGACCTACTCCGCCACCCTGATAAGGGGACTAATGGAAGGGAAGCACCTGGATGCAGATGCGGCCGCTAGTTACATCAACACTGCAGCTACCAGAGGCCTGTGA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |