Tag |
Content |
WERAM ID |
WERAM-Mua-0066 |
Ensembl Protein ID |
GSMUA_Achr4P03250_001 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
5.70e-126 |
420.9 |
13 |
334 |
HDAC |
Class-I |
5.40e-38 |
132.1 |
16 |
325 |
|
Organism |
Musa acuminata |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletae.klekeelesltvd 88 +gl+yde+m++h+++ ++ hpE+peRi+ai+++l+++g+ ++++ l+ark +++ l++vH+++h+el+++ + k +++ ++++++ GSMUA_Achr4P03250_001 13 VGLIYDERMCRHTTPDGEA--HPECPERIRAIWKKLESEGIPRRCVLLNARKVEDKYLASVHTQNHIELIKNISsKEFDSRRQKIASE 98 689************9999..***************************************************997888899999**** PP class-2.txt 89 sdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk...vkkilivDwDvH 173 dsiyl++ s++aa la+G+v+e+ +kv+kg+l+ +a+vRPPGHHae+++amGFClfnnva+aa++l+++ + +kkilivDwDvH GSMUA_Achr4P03250_001 99 LDSIYLNVGSSEAAYLAAGSVIEASEKVAKGDLNSVIAIVRPPGHHAESNEAMGFCLFNNVAIAANYLLNEKPelgIKKILIVDWDVH 186 ********************************************************************99887778************ PP class-2.txt 174 hGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsa 261 hGnGtq++fykdp+vl++S+HR+d g f+p+ ++ga+ +geg+g g+n+Nv+w++g++ da+y+a++++v++piake++Pd++lvsa GSMUA_Achr4P03250_001 187 HGNGTQKMFYKDPRVLFFSVHRFDFGDFYPSGDDGAYCMIGEGPGAGYNINVPWEHGQCSDADYIAVWDHVLIPIAKEYNPDIILVSA 274 **************************************************************************************** PP class-2.txt 262 GfDaaegdplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLl 321 GfDaa dplgg++vt+++y+ l ++l+++a+g++v+vlEGGynlk+ia++v a++k+Ll GSMUA_Achr4P03250_001 275 GFDAAIDDPLGGCCVTPHGYSLLLQKLMQFAQGKIVMVLEGGYNLKSIANSVLACAKVLL 334 **********************************************************98 PP
HDAC Class-I
class-1.txt 6 aydedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvged 91 +yde++ ++ + g+ hp p+r++ + + + + g+ ++ +++++k + ++l+++h++++ie++k++++++ ++ +k + + d GSMUA_Achr4P03250_001 16 IYDERMCRHTTpdGEAHPECPERIRAIWKKLESEGIPRRCVLLNARKVEDKYLASVHTQNHIELIKNISSKEFDSRR---QKIASELD 100 5666666555444889****************************************************998777655...45555556 PP class-1.txt 92 cPvf.dglfeycqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellkk.....hkrvlyididlhh 171 + + g e + l +G+ +ea++k+ k++ + iai G hha +ea Gfc n++ +a ll + k++l +d d+hh GSMUA_Achr4P03250_001 101 SIYLnVGSSEAAYLAAGSVIEASEKVAKGDLNsvIAIVRPPG-HHAESNEAMGFCLFNNVAIAANYLLNEkpelgIKKILIVDWDVHH 187 5443146678888999**********9987542277776666.9*********************999852333368*********** PP class-1.txt 172 GDgveeafyttdrvmtvsfhkyg.eeffPgt..GdlsdvgaekgkyyavnvPlkdg.idDesyekifksviskvieafePeavvlqcG 255 G+g ++ fy+ rv+ s+h+++ +f+P+ G +g++ g y +nvP ++g + D y ++ +v+ ++ + ++P+++++ G GSMUA_Achr4P03250_001 188 GNGTQKMFYKDPRVLFFSVHRFDfGDFYPSGddGAYCMIGEGPGAGYNINVPWEHGqCSDADYIAVWDHVLIPIAKEYNPDIILVSAG 275 *********************974459997523778899****************979****************************** PP class-1.txt 256 aDslagDrlgefnlsikghaecvkfvksf.nlpllvlGGGGYtlrnvaRc 304 D+ D+lg ++ +g++ ++ + +f + +++++ GGY+l+ +a GSMUA_Achr4P03250_001 276 FDAAIDDPLGGCCVTPHGYSLLLQKLMQFaQGKIVMVLEGGYNLKSIANS 325 ***********************999999788999999*******99965 PP
|
Protein Sequence (Fasta) | MAASPDDSLR PRVGLIYDER MCRHTTPDGE AHPECPERIR AIWKKLESEG IPRRCVLLNA 60 RKVEDKYLAS VHTQNHIELI KNISSKEFDS RRQKIASELD SIYLNVGSSE AAYLAAGSVI 120 EASEKVAKGD LNSVIAIVRP PGHHAESNEA MGFCLFNNVA IAANYLLNEK PELGIKKILI 180 VDWDVHHGNG TQKMFYKDPR VLFFSVHRFD FGDFYPSGDD GAYCMIGEGP GAGYNINVPW 240 EHGQCSDADY IAVWDHVLIP IAKEYNPDII LVSAGFDAAI DDPLGGCCVT PHGYSLLLQK 300 LMQFAQGKIV MVLEGGYNLK SIANSVLACA KVLLQEESVG SIQTATFKST WRVIEAVRHE 360 LKGYWPVLDV ELPQNLLITN SRPCPAEVTY SSSESDVEND EGTARTINFS DFVEDDVLLP 420 LSKLKIDEEL VTSNEIVDGY ITWRSLLSKV EVWYASFGSN MWMPRFLCYI EGGKVEGMSA 480 PCCGSLDKSS PKDVIWKIVP HRLLFGRSHT RTWGAGGVAF LDPERSTSDK AYLCMYRITL 540 EQFNDVLLQE NSLHQENGII KQMASPLLDL HILEYVAKNK SLPLKTLKDG WYSTVLYLGK 600 EDDLPILTMT CSASDVERFK SGELPASVPA KDYMNTLVNG LVEGKQLTRE EAVAYVNGAA 660 TWKL 664Protein Fasta Sequence
>GSMUA_Achr4P03250_001|Class-I|Musa acuminata MAASPDDSLRPRVGLIYDERMCRHTTPDGEAHPECPERIRAIWKKLESEGIPRRCVLLNARKVEDKYLASVHTQNHIELIKNISSKEFDSRRQKIASELDSIYLNVGSSEAAYLAAGSVIEASEKVAKGDLNSVIAIVRPPGHHAESNEAMGFCLFNNVAIAANYLLNEKPELGIKKILIVDWDVHHGNGTQKMFYKDPRVLFFSVHRFDFGDFYPSGDDGAYCMIGEGPGAGYNINVPWEHGQCSDADYIAVWDHVLIPIAKEYNPDIILVSAGFDAAIDDPLGGCCVTPHGYSLLLQKLMQFAQGKIVMVLEGGYNLKSIANSVLACAKVLLQEESVGSIQTATFKSTWRVIEAVRHELKGYWPVLDVELPQNLLITNSRPCPAEVTYSSSESDVENDEGTARTINFSDFVEDDVLLPLSKLKIDEELVTSNEIVDGYITWRSLLSKVEVWYASFGSNMWMPRFLCYIEGGKVEGMSAPCCGSLDKSSPKDVIWKIVPHRLLFGRSHTRTWGAGGVAFLDPERSTSDKAYLCMYRITLEQFNDVLLQENSLHQENGIIKQMASPLLDLHILEYVAKNKSLPLKTLKDGWYSTVLYLGKEDDLPILTMTCSASDVERFKSGELPASVPAKDYMNTLVNGLVEGKQLTREEAVAYVNGAATWKL
|
Nucleotide Sequence (Fasta) | ATGGCGGCGT CCCCGGATGA CAGCCTGCGG CCGCGCGTCG GCCTGATCTA CGACGAGAGG 60 ATGTGCCGCC ACACGACGCC AGATGGCGAG GCCCACCCGG AGTGCCCCGA GCGGATCCGC 120 GCCATCTGGA AGAAGCTCGA GTCCGAGGGA ATTCCTCGGA GGTGTGTACT CCTCAATGCT 180 AGGAAAGTCG AGGACAAGTA CTTAGCATCT GTTCATACCC AGAACCATAT TGAATTGATT 240 AAGAATATCA GTTCTAAAGA GTTTGACTCC CGACGTCAAA AGATTGCTTC AGAGTTGGAC 300 TCTATATATC TTAACGTGGG TTCATCTGAA GCTGCTTACC TTGCTGCAGG TTCAGTCATC 360 GAAGCATCTG AGAAGGTTGC TAAAGGAGAT CTTAATTCTG TGATTGCTAT TGTTCGGCCA 420 CCTGGACATC ATGCAGAATC CAATGAAGCT ATGGGATTTT GCCTTTTTAA CAATGTGGCA 480 ATTGCAGCTA ACTATCTATT GAATGAGAAG CCAGAGTTAG GCATAAAGAA GATATTAATC 540 GTGGATTGGG ATGTGCATCA TGGGAATGGC ACCCAAAAAA TGTTCTATAA AGACCCTCGT 600 GTGTTATTTT TCTCTGTTCA TAGGTTTGAC TTTGGAGACT TCTATCCAAG TGGTGATGAT 660 GGTGCTTACT GCATGATCGG AGAAGGACCA GGTGCAGGGT ACAATATCAA CGTTCCCTGG 720 GAACATGGTC AATGTAGTGA TGCAGACTAC ATTGCTGTTT GGGACCATGT GTTGATTCCT 780 ATAGCCAAGG AATACAATCC TGACATTATT TTGGTTTCTG CTGGATTTGA TGCAGCCATT 840 GATGATCCAC TTGGTGGCTG CTGTGTCACA CCACATGGGT ATTCACTTTT ACTGCAAAAG 900 TTGATGCAAT TTGCACAAGG AAAGATAGTA ATGGTCCTCG AAGGCGGATA TAATCTGAAG 960 TCCATAGCTA ATTCTGTTCT TGCTTGTGCA AAAGTGCTGT TGCAAGAAGA ATCTGTTGGA 1020 TCCATACAGA CTGCAACATT CAAGTCCACA TGGCGTGTCA TAGAGGCGGT TCGCCATGAA 1080 CTTAAAGGGT ACTGGCCTGT ACTGGATGTC GAGTTACCTC AGAACTTACT GATTACCAAT 1140 AGCAGACCTT GCCCAGCTGA GGTGACCTAC TCTAGTTCTG AGTCTGATGT GGAAAATGAT 1200 GAGGGAACCG CTCGAACTAT AAATTTTTCA GATTTTGTTG AGGATGATGT GCTTCTACCC 1260 CTTTCGAAAC TGAAGATTGA TGAAGAGTTA GTGACATCTA ATGAGATTGT TGATGGTTAT 1320 ATCACATGGA GATCACTATT ATCAAAAGTT GAAGTTTGGT ATGCCAGCTT TGGGTCAAAT 1380 ATGTGGATGC CAAGGTTCCT GTGCTATATA GAAGGTGGGA AGGTGGAAGG CATGAGTGCA 1440 CCATGCTGTG GATCGCTAGA CAAAAGTTCA CCAAAAGATG TCATTTGGAA AATTGTCCCT 1500 CATCGTTTAC TCTTTGGAAG ATCTCATACC CGCACATGGG GTGCAGGTGG TGTTGCTTTT 1560 CTTGATCCTG AAAGGAGCAC AAGTGACAAA GCCTACTTAT GCATGTATAG AATAACACTT 1620 GAGCAGTTCA ACGATGTATT GCTTCAAGAA AATAGTTTGC ACCAAGAAAA TGGTATTATT 1680 AAACAGATGG CTTCTCCTTT ACTAGATTTA CACATCCTCG AATATGTTGC TAAAAACAAG 1740 TCTTTGCCTC TGAAAACCCT CAAGGATGGA TGGTACTCCA CAGTTCTTTA TTTGGGAAAA 1800 GAGGATGATC TTCCAATTTT AACAATGACG TGCTCTGCAT CAGATGTTGA GCGTTTTAAA 1860 TCTGGAGAGC TACCAGCATC CGTGCCTGCA AAAGACTATA TGAATACACT AGTGAATGGC 1920 CTGGTAGAAG GGAAGCAACT GACCAGGGAG GAGGCTGTTG CATATGTCAA TGGTGCTGCC 1980 ACCTGGAAAT TATGAGCCTG ATCCTGCTGC TTTATCCTCT GAACTCCCTC AGTACCAGAT 2040 CTTCTGGTAA AACAATTTCA AATTAGGAGA TGCATATTTC GCCTAATTCT TCTATTTATG 2100 GTAAGTTACA TCTTGTAAAA TGCTGTTCTT CATTCCTACC TGAAGAATCT AACTCTGTGA 2160 TGCCTAAGTA ACCCAGGTGA TGTATTATTG TTGTGTGTGT TACGT
2206Nucleotide Fasta Sequence
>GSMUA_Achr4P03250_001|Class-I|Musa acuminata ATGGCGGCGTCCCCGGATGACAGCCTGCGGCCGCGCGTCGGCCTGATCTACGACGAGAGGATGTGCCGCCACACGACGCCAGATGGCGAGGCCCACCCGGAGTGCCCCGAGCGGATCCGCGCCATCTGGAAGAAGCTCGAGTCCGAGGGAATTCCTCGGAGGTGTGTACTCCTCAATGCTAGGAAAGTCGAGGACAAGTACTTAGCATCTGTTCATACCCAGAACCATATTGAATTGATTAAGAATATCAGTTCTAAAGAGTTTGACTCCCGACGTCAAAAGATTGCTTCAGAGTTGGACTCTATATATCTTAACGTGGGTTCATCTGAAGCTGCTTACCTTGCTGCAGGTTCAGTCATCGAAGCATCTGAGAAGGTTGCTAAAGGAGATCTTAATTCTGTGATTGCTATTGTTCGGCCACCTGGACATCATGCAGAATCCAATGAAGCTATGGGATTTTGCCTTTTTAACAATGTGGCAATTGCAGCTAACTATCTATTGAATGAGAAGCCAGAGTTAGGCATAAAGAAGATATTAATCGTGGATTGGGATGTGCATCATGGGAATGGCACCCAAAAAATGTTCTATAAAGACCCTCGTGTGTTATTTTTCTCTGTTCATAGGTTTGACTTTGGAGACTTCTATCCAAGTGGTGATGATGGTGCTTACTGCATGATCGGAGAAGGACCAGGTGCAGGGTACAATATCAACGTTCCCTGGGAACATGGTCAATGTAGTGATGCAGACTACATTGCTGTTTGGGACCATGTGTTGATTCCTATAGCCAAGGAATACAATCCTGACATTATTTTGGTTTCTGCTGGATTTGATGCAGCCATTGATGATCCACTTGGTGGCTGCTGTGTCACACCACATGGGTATTCACTTTTACTGCAAAAGTTGATGCAATTTGCACAAGGAAAGATAGTAATGGTCCTCGAAGGCGGATATAATCTGAAGTCCATAGCTAATTCTGTTCTTGCTTGTGCAAAAGTGCTGTTGCAAGAAGAATCTGTTGGATCCATACAGACTGCAACATTCAAGTCCACATGGCGTGTCATAGAGGCGGTTCGCCATGAACTTAAAGGGTACTGGCCTGTACTGGATGTCGAGTTACCTCAGAACTTACTGATTACCAATAGCAGACCTTGCCCAGCTGAGGTGACCTACTCTAGTTCTGAGTCTGATGTGGAAAATGATGAGGGAACCGCTCGAACTATAAATTTTTCAGATTTTGTTGAGGATGATGTGCTTCTACCCCTTTCGAAACTGAAGATTGATGAAGAGTTAGTGACATCTAATGAGATTGTTGATGGTTATATCACATGGAGATCACTATTATCAAAAGTTGAAGTTTGGTATGCCAGCTTTGGGTCAAATATGTGGATGCCAAGGTTCCTGTGCTATATAGAAGGTGGGAAGGTGGAAGGCATGAGTGCACCATGCTGTGGATCGCTAGACAAAAGTTCACCAAAAGATGTCATTTGGAAAATTGTCCCTCATCGTTTACTCTTTGGAAGATCTCATACCCGCACATGGGGTGCAGGTGGTGTTGCTTTTCTTGATCCTGAAAGGAGCACAAGTGACAAAGCCTACTTATGCATGTATAGAATAACACTTGAGCAGTTCAACGATGTATTGCTTCAAGAAAATAGTTTGCACCAAGAAAATGGTATTATTAAACAGATGGCTTCTCCTTTACTAGATTTACACATCCTCGAATATGTTGCTAAAAACAAGTCTTTGCCTCTGAAAACCCTCAAGGATGGATGGTACTCCACAGTTCTTTATTTGGGAAAAGAGGATGATCTTCCAATTTTAACAATGACGTGCTCTGCATCAGATGTTGAGCGTTTTAAATCTGGAGAGCTACCAGCATCCGTGCCTGCAAAAGACTATATGAATACACTAGTGAATGGCCTGGTAGAAGGGAAGCAACTGACCAGGGAGGAGGCTGTTGCATATGTCAATGGTGCTGCCACCTGGAAATTATGAGCCTGATCCTGCTGCTTTATCCTCTGAACTCCCTCAGTACCAGATCTTCTGGTAAAACAATTTCAAATTAGGAGATGCATATTTCGCCTAATTCTTCTATTTATGGTAAGTTACATCTTGTAAAATGCTGTTCTTCATTCCTACCTGAAGAATCTAACTCTGTGATGCCTAAGTAACCCAGGTGATGTATTATTGTTGTGTGTGTTACGT
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |