Tag |
Content |
WERAM ID |
WERAM-Amt-0091 |
Ensembl Protein ID |
ERM99985 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
1.90e-120 |
402.3 |
13 |
333 |
HDAC |
Class-I |
5.10e-31 |
108.8 |
31 |
320 |
|
Organism |
Amborella trichopoda |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeelesltvdsdsiylesksi 99 +glvyde+m+kh+ ++ hpE++ Ri+ai+++l +a ++e+++ + a++a++++++ vH+ +h++l+++ ++l+ ++++ +++siyl++ s+ ERM99985 13 VGLVYDERMCKHSEPTVMP--HPESSMRIRAIWDKLGQARVTERCVIVPAKRAEDKDIACVHTMNHLKLIKSIDSLSAIPRSRIARRFNSIYLSEGST 108 589***********99998..***************************************************************************** PP class-2.txt 100 kaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk...vkkilivDwDvHhGnGtqeifykdpkvlylSlH 194 +aa la+G+vle++++v+kgel+ g+a+vRPPGHHae+++amGFClfnn+a+aa+ l ++ + ++kilivDwDvHhGnGtq++f++d++vl++S+H ERM99985 109 EAAYLAAGSVLEVAERVAKGELNSGVAIVRPPGHHAEPDEAMGFCLFNNIAIAAHCLVHERPelgIHKILIVDWDVHHGNGTQKMFWSDSQVLFFSVH 206 ********************************************************999877677********************************* PP class-2.txt 195 RydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatltkqllkla 292 R+d+g+f+p+ ++g+ + +geg+g gfn+Nv+w++g +gda+yla+++++++pia++++Pd++l+s GfDaa gdplgg+++t+ +y+ +tk+l+++a ERM99985 207 RFDSGTFYPSGDHGSHTMIGEGAGIGFNINVPWEHGRCGDADYLAVWDHILIPIARSYDPDMILISGGFDAAIGDPLGGCCITPYGYSIMTKKLMEFA 304 ************************************************************************************************** PP class-2.txt 293 ggrvvlvlEGGynlkaiaeaveavvkaLl 321 +g++vl+lEGGynl+++ ++v a+v++Ll ERM99985 305 KGKIVLALEGGYNLDSLENSVLACVETLL 333 ***************************98 PP
HDAC Class-I
class-1.txt 19 khpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaakkL 116 hp r++ + + + + ++++ iv +k+a+ ++++ +h+ ++++++k++++ +a s+ ++fn + +g e + l +G+ le a+++ ERM99985 31 PHPESSMRIRAIWDKLGQARVTERCVIVPAKRAEDKDIACVHTMNHLKLIKSIDSLSAIPRSRIARRFNS---IYLSEGSTEAAYLAAGSVLEVAERV 125 577888888888888888899999999**************************9999999999999**95...55789999***************** PP class-1.txt 117 nkkead..iainwaGGlhhakkseasGfcyvnDivlailellkk.....hkrvlyididlhhGDgveeafyttdrvmtvsfhkygee.ffPg..tGdl 204 k+e + +ai G hha +ea Gfc n+i +a l ++ +++l +d d+hhG+g ++ f ++v+ s+h+++ + f+P+ G+ ERM99985 126 AKGELNsgVAIVRPPG-HHAEPDEAMGFCLFNNIAIAAHCLVHErpelgIHKILIVDWDVHHGNGTQKMFWSDSQVLFFSVHRFDSGtFYPSgdHGSH 222 *998662266666665.9*******************999987522233579********************************97527786224777 PP class-1.txt 205 sdvgaekgkyyavnvPlkdg.idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGGGGYtlrn 300 + +g++ g + +nvP ++g + D y ++ +++ ++ + ++P+++++ G D+ gD+lg ++ g++ + k + +f + ++++ GGY+l ERM99985 223 TMIGEGAGIGFNINVPWEHGrCGDADYLAVWDHILIPIARSYDPDMILISGGFDAAIGDPLGGCCITPYGYSIMTKKLMEFaKGKIVLALEGGYNLDS 320 889999999**********9899*****************************************************99999555666667899*9865 PP
|
Protein Sequence (Fasta) | MNLQRAIAAP PVVGLVYDER MCKHSEPTVM PHPESSMRIR AIWDKLGQAR VTERCVIVPA 60 KRAEDKDIAC VHTMNHLKLI KSIDSLSAIP RSRIARRFNS IYLSEGSTEA AYLAAGSVLE 120 VAERVAKGEL NSGVAIVRPP GHHAEPDEAM GFCLFNNIAI AAHCLVHERP ELGIHKILIV 180 DWDVHHGNGT QKMFWSDSQV LFFSVHRFDS GTFYPSGDHG SHTMIGEGAG IGFNINVPWE 240 HGRCGDADYL AVWDHILIPI ARSYDPDMIL ISGGFDAAIG DPLGGCCITP YGYSIMTKKL 300 MEFAKGKIVL ALEGGYNLDS LENSVLACVE TLLRQEKPTI KTPVSHPFRS TWSTIQMVRK 360 ILSPFWPVLS EELPQGLYAN SRPYVFELSS SSDSDAEHKE EFTANSTEAP SGSVSDDFDI 420 LEPLGMLKID VDGPKDRDAL KSSLKREEIP CGPRPFPDQM VNVSVPWRPK YSEIDVWYAC 480 YGSNLDKSRF LCYVQGGQLD GMQIICRGAK DKSPPKEISW RMVPHRLFFA YAETKTWGPG 540 GSAFLRPKRN DCEKTHVCMY KITLEQFNDI LLQENDNRGS DLTVPLVDLS ALSFVESNES 600 TPLEVMKETR YGNLVCLGNV DGCPILTITS FWLEQKRQSQ ELLRRPRGSE LNFSDEVLFS 660 SL 662Protein Fasta Sequence
>ERM99985|Class-I|Amborella trichopoda MNLQRAIAAPPVVGLVYDERMCKHSEPTVMPHPESSMRIRAIWDKLGQARVTERCVIVPAKRAEDKDIACVHTMNHLKLIKSIDSLSAIPRSRIARRFNSIYLSEGSTEAAYLAAGSVLEVAERVAKGELNSGVAIVRPPGHHAEPDEAMGFCLFNNIAIAAHCLVHERPELGIHKILIVDWDVHHGNGTQKMFWSDSQVLFFSVHRFDSGTFYPSGDHGSHTMIGEGAGIGFNINVPWEHGRCGDADYLAVWDHILIPIARSYDPDMILISGGFDAAIGDPLGGCCITPYGYSIMTKKLMEFAKGKIVLALEGGYNLDSLENSVLACVETLLRQEKPTIKTPVSHPFRSTWSTIQMVRKILSPFWPVLSEELPQGLYANSRPYVFELSSSSDSDAEHKEEFTANSTEAPSGSVSDDFDILEPLGMLKIDVDGPKDRDALKSSLKREEIPCGPRPFPDQMVNVSVPWRPKYSEIDVWYACYGSNLDKSRFLCYVQGGQLDGMQIICRGAKDKSPPKEISWRMVPHRLFFAYAETKTWGPGGSAFLRPKRNDCEKTHVCMYKITLEQFNDILLQENDNRGSDLTVPLVDLSALSFVESNESTPLEVMKETRYGNLVCLGNVDGCPILTITSFWLEQKRQSQELLRRPRGSELNFSDEVLFSSL
|
Nucleotide Sequence (Fasta) | ATGAATTTGC AGAGAGCAAT AGCAGCCCCA CCAGTTGTGG GGCTTGTTTA TGATGAGAGG 60 ATGTGTAAGC ACTCTGAACC CACTGTCATG CCTCACCCTG AAAGCTCCAT GAGAATTAGG 120 GCTATTTGGG ACAAGCTAGG GCAAGCTCGT GTCACTGAAA GATGTGTTAT TGTTCCTGCC 180 AAGCGTGCGG AGGATAAGGA TATAGCATGT GTTCATACCA TGAATCATCT TAAGTTGATA 240 AAGAGTATAG ATTCTCTTTC GGCTATACCT AGATCTAGGA TCGCAAGACG ATTCAATTCG 300 ATATATCTCA GTGAGGGCTC AACTGAAGCT GCTTATCTTG CTGCTGGTTC AGTTCTAGAG 360 GTAGCTGAGA GGGTGGCTAA AGGGGAGTTA AATTCTGGTG TAGCCATTGT TAGGCCTCCT 420 GGTCATCATG CGGAGCCTGA TGAAGCGATG GGGTTTTGTC TTTTTAATAA TATTGCCATC 480 GCAGCGCATT GCCTTGTTCA TGAGAGGCCA GAATTGGGAA TTCATAAAAT TCTAATTGTT 540 GATTGGGATG TACACCATGG AAATGGTACT CAAAAAATGT TCTGGAGTGA TTCTCAGGTG 600 TTGTTCTTCT CTGTTCATAG GTTCGACTCA GGGACCTTCT ATCCATCTGG AGACCATGGC 660 TCCCATACCA TGATCGGTGA AGGTGCAGGT ATAGGATTTA ACATAAATGT TCCTTGGGAG 720 CATGGAAGGT GTGGAGATGC AGACTATCTT GCAGTTTGGG ATCATATACT TATTCCTATA 780 GCCAGGAGTT ATGATCCAGA TATGATTCTT ATTTCTGGAG GTTTTGATGC AGCTATTGGT 840 GATCCATTAG GCGGATGTTG CATCACACCT TATGGTTATT CAATTATGAC CAAAAAGCTG 900 ATGGAGTTTG CAAAGGGGAA GATCGTGTTG GCACTTGAAG GAGGATACAA TCTTGATTCC 960 TTGGAAAATT CGGTCCTTGC ATGTGTAGAA ACATTATTAC GACAGGAAAA ACCTACTATC 1020 AAGACTCCTG TATCCCATCC ATTTAGATCA ACTTGGAGCA CTATACAAAT GGTGCGTAAA 1080 ATACTCAGTC CATTCTGGCC TGTCTTGTCG GAAGAATTAC CACAAGGGTT GTATGCGAAT 1140 AGCAGACCTT ATGTATTTGA GTTGAGTTCA AGTTCTGATT CTGATGCTGA GCACAAGGAA 1200 GAGTTCACAG CAAATTCGAC TGAAGCCCCA TCTGGTTCTG TTTCTGATGA CTTTGATATT 1260 CTGGAGCCTC TTGGTATGCT GAAAATTGAT GTTGATGGCC CTAAGGATAG GGATGCTTTG 1320 AAGTCTTCAT TAAAGAGGGA GGAAATTCCT TGTGGACCGA GGCCGTTCCC TGATCAAATG 1380 GTTAATGTTT CTGTTCCTTG GAGACCAAAA TATTCAGAGA TTGACGTCTG GTATGCTTGC 1440 TATGGTTCGA ACTTGGACAA ATCAAGGTTT CTCTGTTATG TTCAGGGTGG ACAGTTGGAT 1500 GGCATGCAAA TCATATGTAG GGGTGCGAAG GATAAAAGTC CCCCAAAAGA AATCTCATGG 1560 CGAATGGTTC CCCATCGTTT ATTCTTCGCA TATGCTGAGA CAAAAACATG GGGTCCTGGA 1620 GGAAGTGCGT TCCTACGTCC CAAAAGGAAT GATTGCGAGA AAACTCATGT ATGCATGTAT 1680 AAAATAACGC TTGAGCAGTT TAATGATATC TTGCTTCAAG AGAATGATAA TAGGGGTAGT 1740 GACTTGACGG TTCCTTTAGT TGATTTATCT GCTCTATCCT TTGTGGAATC TAATGAATCA 1800 ACTCCTTTGG AGGTTATGAA GGAAACTCGG TATGGTAATC TTGTTTGCCT CGGGAATGTT 1860 GATGGCTGCC CCATTCTGAC TATAACGTCA TTTTGGTTGG AACAAAAGAG ACAGTCTCAA 1920 GAGCTCTTGA GAAGGCCAAG AGGTTCCGAA CTGAACTTCT CGGACGAGGT GTTATTCTCA 1980 TCCCTATGA
Nucleotide Fasta Sequence
>ERM99985|Class-I|Amborella trichopoda ATGAATTTGCAGAGAGCAATAGCAGCCCCACCAGTTGTGGGGCTTGTTTATGATGAGAGGATGTGTAAGCACTCTGAACCCACTGTCATGCCTCACCCTGAAAGCTCCATGAGAATTAGGGCTATTTGGGACAAGCTAGGGCAAGCTCGTGTCACTGAAAGATGTGTTATTGTTCCTGCCAAGCGTGCGGAGGATAAGGATATAGCATGTGTTCATACCATGAATCATCTTAAGTTGATAAAGAGTATAGATTCTCTTTCGGCTATACCTAGATCTAGGATCGCAAGACGATTCAATTCGATATATCTCAGTGAGGGCTCAACTGAAGCTGCTTATCTTGCTGCTGGTTCAGTTCTAGAGGTAGCTGAGAGGGTGGCTAAAGGGGAGTTAAATTCTGGTGTAGCCATTGTTAGGCCTCCTGGTCATCATGCGGAGCCTGATGAAGCGATGGGGTTTTGTCTTTTTAATAATATTGCCATCGCAGCGCATTGCCTTGTTCATGAGAGGCCAGAATTGGGAATTCATAAAATTCTAATTGTTGATTGGGATGTACACCATGGAAATGGTACTCAAAAAATGTTCTGGAGTGATTCTCAGGTGTTGTTCTTCTCTGTTCATAGGTTCGACTCAGGGACCTTCTATCCATCTGGAGACCATGGCTCCCATACCATGATCGGTGAAGGTGCAGGTATAGGATTTAACATAAATGTTCCTTGGGAGCATGGAAGGTGTGGAGATGCAGACTATCTTGCAGTTTGGGATCATATACTTATTCCTATAGCCAGGAGTTATGATCCAGATATGATTCTTATTTCTGGAGGTTTTGATGCAGCTATTGGTGATCCATTAGGCGGATGTTGCATCACACCTTATGGTTATTCAATTATGACCAAAAAGCTGATGGAGTTTGCAAAGGGGAAGATCGTGTTGGCACTTGAAGGAGGATACAATCTTGATTCCTTGGAAAATTCGGTCCTTGCATGTGTAGAAACATTATTACGACAGGAAAAACCTACTATCAAGACTCCTGTATCCCATCCATTTAGATCAACTTGGAGCACTATACAAATGGTGCGTAAAATACTCAGTCCATTCTGGCCTGTCTTGTCGGAAGAATTACCACAAGGGTTGTATGCGAATAGCAGACCTTATGTATTTGAGTTGAGTTCAAGTTCTGATTCTGATGCTGAGCACAAGGAAGAGTTCACAGCAAATTCGACTGAAGCCCCATCTGGTTCTGTTTCTGATGACTTTGATATTCTGGAGCCTCTTGGTATGCTGAAAATTGATGTTGATGGCCCTAAGGATAGGGATGCTTTGAAGTCTTCATTAAAGAGGGAGGAAATTCCTTGTGGACCGAGGCCGTTCCCTGATCAAATGGTTAATGTTTCTGTTCCTTGGAGACCAAAATATTCAGAGATTGACGTCTGGTATGCTTGCTATGGTTCGAACTTGGACAAATCAAGGTTTCTCTGTTATGTTCAGGGTGGACAGTTGGATGGCATGCAAATCATATGTAGGGGTGCGAAGGATAAAAGTCCCCCAAAAGAAATCTCATGGCGAATGGTTCCCCATCGTTTATTCTTCGCATATGCTGAGACAAAAACATGGGGTCCTGGAGGAAGTGCGTTCCTACGTCCCAAAAGGAATGATTGCGAGAAAACTCATGTATGCATGTATAAAATAACGCTTGAGCAGTTTAATGATATCTTGCTTCAAGAGAATGATAATAGGGGTAGTGACTTGACGGTTCCTTTAGTTGATTTATCTGCTCTATCCTTTGTGGAATCTAATGAATCAACTCCTTTGGAGGTTATGAAGGAAACTCGGTATGGTAATCTTGTTTGCCTCGGGAATGTTGATGGCTGCCCCATTCTGACTATAACGTCATTTTGGTTGGAACAAAAGAGACAGTCTCAAGAGCTCTTGAGAAGGCCAAGAGGTTCCGAACTGAACTTCTCGGACGAGGTGTTATTCTCATCCCTATGA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |