WERAM Information


Tag Content
WERAM ID WERAM-Amt-0091
Ensembl Protein ID ERM99985
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AMTR_s00110p00134320 ERM99985 ERM99985
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.90e-120 402.3 13 333
HDAC Class-I 5.10e-31 108.8 31 320
Organism Amborella trichopoda
Domain Profile
  HDAC Class-II

  class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeelesltvdsdsiylesksi 99 
+glvyde+m+kh+ ++ hpE++ Ri+ai+++l +a ++e+++ + a++a++++++ vH+ +h++l+++ ++l+ ++++ +++siyl++ s+
ERM99985 13 VGLVYDERMCKHSEPTVMP--HPESSMRIRAIWDKLGQARVTERCVIVPAKRAEDKDIACVHTMNHLKLIKSIDSLSAIPRSRIARRFNSIYLSEGST 108
589***********99998..***************************************************************************** PP
class-2.txt 100 kaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk...vkkilivDwDvHhGnGtqeifykdpkvlylSlH 194
+aa la+G+vle++++v+kgel+ g+a+vRPPGHHae+++amGFClfnn+a+aa+ l ++ + ++kilivDwDvHhGnGtq++f++d++vl++S+H
ERM99985 109 EAAYLAAGSVLEVAERVAKGELNSGVAIVRPPGHHAEPDEAMGFCLFNNIAIAAHCLVHERPelgIHKILIVDWDVHHGNGTQKMFWSDSQVLFFSVH 206
********************************************************999877677********************************* PP
class-2.txt 195 RydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatltkqllkla 292
R+d+g+f+p+ ++g+ + +geg+g gfn+Nv+w++g +gda+yla+++++++pia++++Pd++l+s GfDaa gdplgg+++t+ +y+ +tk+l+++a
ERM99985 207 RFDSGTFYPSGDHGSHTMIGEGAGIGFNINVPWEHGRCGDADYLAVWDHILIPIARSYDPDMILISGGFDAAIGDPLGGCCITPYGYSIMTKKLMEFA 304
************************************************************************************************** PP
class-2.txt 293 ggrvvlvlEGGynlkaiaeaveavvkaLl 321
+g++vl+lEGGynl+++ ++v a+v++Ll
ERM99985 305 KGKIVLALEGGYNLDSLENSVLACVETLL 333
***************************98 PP

  HDAC Class-I

  class-1.txt  19 khpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaakkL 116
hp r++ + + + + ++++ iv +k+a+ ++++ +h+ ++++++k++++ +a s+ ++fn + +g e + l +G+ le a+++
ERM99985 31 PHPESSMRIRAIWDKLGQARVTERCVIVPAKRAEDKDIACVHTMNHLKLIKSIDSLSAIPRSRIARRFNS---IYLSEGSTEAAYLAAGSVLEVAERV 125
577888888888888888899999999**************************9999999999999**95...55789999***************** PP
class-1.txt 117 nkkead..iainwaGGlhhakkseasGfcyvnDivlailellkk.....hkrvlyididlhhGDgveeafyttdrvmtvsfhkygee.ffPg..tGdl 204
k+e + +ai G hha +ea Gfc n+i +a l ++ +++l +d d+hhG+g ++ f ++v+ s+h+++ + f+P+ G+
ERM99985 126 AKGELNsgVAIVRPPG-HHAEPDEAMGFCLFNNIAIAAHCLVHErpelgIHKILIVDWDVHHGNGTQKMFWSDSQVLFFSVHRFDSGtFYPSgdHGSH 222
*998662266666665.9*******************999987522233579********************************97527786224777 PP
class-1.txt 205 sdvgaekgkyyavnvPlkdg.idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGGGGYtlrn 300
+ +g++ g + +nvP ++g + D y ++ +++ ++ + ++P+++++ G D+ gD+lg ++ g++ + k + +f + ++++ GGY+l
ERM99985 223 TMIGEGAGIGFNINVPWEHGrCGDADYLAVWDHILIPIARSYDPDMILISGGFDAAIGDPLGGCCITPYGYSIMTKKLMEFaKGKIVLALEGGYNLDS 320
889999999**********9899*****************************************************99999555666667899*9865 PP

Protein Sequence
(Fasta)
MNLQRAIAAP PVVGLVYDER MCKHSEPTVM PHPESSMRIR AIWDKLGQAR VTERCVIVPA 60
KRAEDKDIAC VHTMNHLKLI KSIDSLSAIP RSRIARRFNS IYLSEGSTEA AYLAAGSVLE 120
VAERVAKGEL NSGVAIVRPP GHHAEPDEAM GFCLFNNIAI AAHCLVHERP ELGIHKILIV 180
DWDVHHGNGT QKMFWSDSQV LFFSVHRFDS GTFYPSGDHG SHTMIGEGAG IGFNINVPWE 240
HGRCGDADYL AVWDHILIPI ARSYDPDMIL ISGGFDAAIG DPLGGCCITP YGYSIMTKKL 300
MEFAKGKIVL ALEGGYNLDS LENSVLACVE TLLRQEKPTI KTPVSHPFRS TWSTIQMVRK 360
ILSPFWPVLS EELPQGLYAN SRPYVFELSS SSDSDAEHKE EFTANSTEAP SGSVSDDFDI 420
LEPLGMLKID VDGPKDRDAL KSSLKREEIP CGPRPFPDQM VNVSVPWRPK YSEIDVWYAC 480
YGSNLDKSRF LCYVQGGQLD GMQIICRGAK DKSPPKEISW RMVPHRLFFA YAETKTWGPG 540
GSAFLRPKRN DCEKTHVCMY KITLEQFNDI LLQENDNRGS DLTVPLVDLS ALSFVESNES 600
TPLEVMKETR YGNLVCLGNV DGCPILTITS FWLEQKRQSQ ELLRRPRGSE LNFSDEVLFS 660
SL 662
Nucleotide Sequence
(Fasta)
ATGAATTTGC AGAGAGCAAT AGCAGCCCCA CCAGTTGTGG GGCTTGTTTA TGATGAGAGG 60
ATGTGTAAGC ACTCTGAACC CACTGTCATG CCTCACCCTG AAAGCTCCAT GAGAATTAGG 120
GCTATTTGGG ACAAGCTAGG GCAAGCTCGT GTCACTGAAA GATGTGTTAT TGTTCCTGCC 180
AAGCGTGCGG AGGATAAGGA TATAGCATGT GTTCATACCA TGAATCATCT TAAGTTGATA 240
AAGAGTATAG ATTCTCTTTC GGCTATACCT AGATCTAGGA TCGCAAGACG ATTCAATTCG 300
ATATATCTCA GTGAGGGCTC AACTGAAGCT GCTTATCTTG CTGCTGGTTC AGTTCTAGAG 360
GTAGCTGAGA GGGTGGCTAA AGGGGAGTTA AATTCTGGTG TAGCCATTGT TAGGCCTCCT 420
GGTCATCATG CGGAGCCTGA TGAAGCGATG GGGTTTTGTC TTTTTAATAA TATTGCCATC 480
GCAGCGCATT GCCTTGTTCA TGAGAGGCCA GAATTGGGAA TTCATAAAAT TCTAATTGTT 540
GATTGGGATG TACACCATGG AAATGGTACT CAAAAAATGT TCTGGAGTGA TTCTCAGGTG 600
TTGTTCTTCT CTGTTCATAG GTTCGACTCA GGGACCTTCT ATCCATCTGG AGACCATGGC 660
TCCCATACCA TGATCGGTGA AGGTGCAGGT ATAGGATTTA ACATAAATGT TCCTTGGGAG 720
CATGGAAGGT GTGGAGATGC AGACTATCTT GCAGTTTGGG ATCATATACT TATTCCTATA 780
GCCAGGAGTT ATGATCCAGA TATGATTCTT ATTTCTGGAG GTTTTGATGC AGCTATTGGT 840
GATCCATTAG GCGGATGTTG CATCACACCT TATGGTTATT CAATTATGAC CAAAAAGCTG 900
ATGGAGTTTG CAAAGGGGAA GATCGTGTTG GCACTTGAAG GAGGATACAA TCTTGATTCC 960
TTGGAAAATT CGGTCCTTGC ATGTGTAGAA ACATTATTAC GACAGGAAAA ACCTACTATC 1020
AAGACTCCTG TATCCCATCC ATTTAGATCA ACTTGGAGCA CTATACAAAT GGTGCGTAAA 1080
ATACTCAGTC CATTCTGGCC TGTCTTGTCG GAAGAATTAC CACAAGGGTT GTATGCGAAT 1140
AGCAGACCTT ATGTATTTGA GTTGAGTTCA AGTTCTGATT CTGATGCTGA GCACAAGGAA 1200
GAGTTCACAG CAAATTCGAC TGAAGCCCCA TCTGGTTCTG TTTCTGATGA CTTTGATATT 1260
CTGGAGCCTC TTGGTATGCT GAAAATTGAT GTTGATGGCC CTAAGGATAG GGATGCTTTG 1320
AAGTCTTCAT TAAAGAGGGA GGAAATTCCT TGTGGACCGA GGCCGTTCCC TGATCAAATG 1380
GTTAATGTTT CTGTTCCTTG GAGACCAAAA TATTCAGAGA TTGACGTCTG GTATGCTTGC 1440
TATGGTTCGA ACTTGGACAA ATCAAGGTTT CTCTGTTATG TTCAGGGTGG ACAGTTGGAT 1500
GGCATGCAAA TCATATGTAG GGGTGCGAAG GATAAAAGTC CCCCAAAAGA AATCTCATGG 1560
CGAATGGTTC CCCATCGTTT ATTCTTCGCA TATGCTGAGA CAAAAACATG GGGTCCTGGA 1620
GGAAGTGCGT TCCTACGTCC CAAAAGGAAT GATTGCGAGA AAACTCATGT ATGCATGTAT 1680
AAAATAACGC TTGAGCAGTT TAATGATATC TTGCTTCAAG AGAATGATAA TAGGGGTAGT 1740
GACTTGACGG TTCCTTTAGT TGATTTATCT GCTCTATCCT TTGTGGAATC TAATGAATCA 1800
ACTCCTTTGG AGGTTATGAA GGAAACTCGG TATGGTAATC TTGTTTGCCT CGGGAATGTT 1860
GATGGCTGCC CCATTCTGAC TATAACGTCA TTTTGGTTGG AACAAAAGAG ACAGTCTCAA 1920
GAGCTCTTGA GAAGGCCAAG AGGTTCCGAA CTGAACTTCT CGGACGAGGT GTTATTCTCA 1980
TCCCTATGA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pot-0045 POPTR_0004s09180.1 Populus trichocarpa 56 0.0 716
WERAM-Mua-0066 GSMUA_Achr4P03250_001 Musa acuminata 55 0.0 692
WERAM-Viv-0107 VIT_17s0000g07280.t01 Vitis vinifera 55 0.0 682
WERAM-Brr-0068 Bra012984.1-P Brassica rapa 54 0.0 680
WERAM-Tra-0099 Traes_2DS_DFCAF1EA5.1 Triticum aestivum 53 0.0 679
WERAM-Art-0146 AT5G61060.1 Arabidopsis thaliana 54 0.0 678
WERAM-Sol-0055 Solyc03g115150.2.1 Solanum lycopersicum 53 0.0 678
WERAM-Bro-0134 Bo7g098310.1 Brassica oleracea 54 0.0 677
WERAM-Sei-0109 Si029091m Setaria italica 54 0.0 677
WERAM-Thc-0031 EOY22062 Theobroma cacao 54 0.0 676
WERAM-Lep-0079 LPERR07G18450.1 Leersia perrieri 54 0.0 676
WERAM-Zem-0143 GRMZM2G457889_P01 Zea mays 53 0.0 673
WERAM-Orbr-0087 OB07G26850.1 Oryza brachyantha 54 0.0 672
WERAM-Glm-0045 GLYMA05G00460.1 Glycine max 53 0.0 671
WERAM-Orgl-0076 OGLUM07G21150.1 Oryza glumaepatula 54 0.0 665
WERAM-Ori-0088 BGIOSGA026083-PA Oryza indica 53 0.0 665
WERAM-Ors-0072 OS07T0602200-01 Oryza sativa 54 0.0 665
WERAM-Orr-0082 ORUFI07G22240.1 Oryza rufipogon 54 0.0 665
WERAM-Org-0078 ORGLA07G0164500.1 Oryza glaberrima 53 0.0 664
WERAM-Orni-0078 ONIVA07G19970.1 Oryza nivara 53 0.0 664
WERAM-Arl-0149 scaffold_802745.1 Arabidopsis lyrata 54 0.0 660
WERAM-Brd-0010 BRADI1G22240.1 Brachypodium distachyon 53 0.0 657
WERAM-Prp-0049 EMJ12067 Prunus persica 58 0.0 656
WERAM-Sob-0036 Sb02g038550.1 Sorghum bicolor 53 0.0 654
WERAM-Met-0112 KEH32016 Medicago truncatula 52 0.0 647
WERAM-Aet-0088 EMT31322 Aegilops tauschii 54 0.0 631
WERAM-Orp-0076 OPUNC07G19850.1 Oryza punctata 51 1e-179 627
WERAM-Orb-0079 OBART07G21300.1 Oryza barthii 51 1e-172 603
WERAM-Orl-0040 KN538895.1_FGP007 Oryza longistaminata 51 1e-164 577
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 46 2e-156 550
WERAM-Tru-0053 TRIUR3_22556-P1 Triticum urartu 57 2e-131 467
WERAM-Hov-0018 MLOC_16422.1 Hordeum vulgare 63 4e-128 456
WERAM-Php-0085 PP1S34_252V6.1 Physcomitrella patens 55 9e-115 411
WERAM-Ran-0201 ENSRNOP00000063689.2 Rattus norvegicus 46 3e-88 323
WERAM-Orn-0011 ENSONIP00000001061.1 Oreochromis niloticus 39 5e-88 322
WERAM-Pof-0022 ENSPFOP00000001799.2 Poecilia formosa 42 3e-87 320
WERAM-Mum-0115 ENSMUSP00000033501.8 Mus musculus 45 6e-87 319
WERAM-Xim-0160 ENSXMAP00000013063.1 Xiphophorus maculatus 43 9e-87 318
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 44 3e-86 317
WERAM-Orc-0102 ENSOCUP00000008741.3 Oryctolagus cuniculus 43 6e-86 316
WERAM-Eqc-0001 ENSECAP00000001121.1 Equus caballus 44 6e-86 315
WERAM-Dar-0023 ENSDARP00000124246.1 Danio rerio 41 2e-85 314
WERAM-Ten-0019 ENSTNIP00000004593.1 Tetraodon nigroviridis 42 4e-85 313
WERAM-Ict-0125 ENSSTOP00000012693.2 Ictidomys tridecemlineatus 41 9e-85 311
WERAM-Aim-0139 ENSAMEP00000013236.1 Ailuropoda melanoleuca 44 2e-84 311
WERAM-Xet-0155 ENSXETP00000050501.3 Xenopus tropicalis 41 2e-84 311
WERAM-Fec-0031 ENSFCAP00000002366.3 Felis catus 43 2e-84 310
WERAM-Tar-0042 ENSTRUP00000010127.1 Takifugu rubripes 42 6e-84 309
WERAM-Anc-0082 ENSACAP00000007918.3 Anolis carolinensis 41 2e-83 307
WERAM-Myl-0104 ENSMLUP00000008295.2 Myotis lucifugus 43 4e-83 306
WERAM-Dan-0022 ENSDNOP00000002136.3 Dasypus novemcinctus 44 9e-83 305
WERAM-Caf-0161 ENSCAFP00000022990.3 Canis familiaris 43 1e-82 305
WERAM-Asm-0181 ENSAMXP00000017644.1 Astyanax mexicanus 40 2e-82 304
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 43 3e-82 303
WERAM-Mup-0158 ENSMPUP00000013557.1 Mustela putorius furo 43 3e-82 303
WERAM-Ova-0124 ENSOARP00000012678.1 Ovis aries 44 4e-82 303
WERAM-Cap-0109 ENSCPOP00000008049.2 Cavia porcellus 45 5e-82 303
WERAM-Bot-0122 ENSBTAP00000017618.5 Bos taurus 44 9e-82 302
WERAM-Mod-0081 ENSMODP00000012731.2 Monodelphis domestica 42 2e-81 301
WERAM-Loa-0047 ENSLAFP00000003196.3 Loxodonta africana 45 3e-81 300
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 39 6e-81 299
WERAM-Kop-0012 CAY68916 Komagataella pastoris 41 1e-80 298
WERAM-Caa-0034 KGT64501 Candida albicans 39 1e-80 298
WERAM-Caj-0022 ENSCJAP00000004409.2 Callithrix jacchus 45 1e-80 298
WERAM-Mae-0111 ENSMEUP00000010640.1 Macropus eugenii 46 1e-79 295
WERAM-Otg-0144 ENSOGAP00000012420.2 Otolemur garnettii 39 1e-79 295
WERAM-Chs-0158 ENSCSAP00000009365.1 Chlorocebus sabaeus 44 1e-79 295
WERAM-Mam-0153 ENSMMUP00000021637.2 Macaca mulatta 44 2e-79 294
WERAM-Hos-0047 ENSP00000365804.2 Homo sapiens 44 2e-79 294
WERAM-Paa-0049 ENSPANP00000006915.1 Papio anubis 44 2e-79 294
WERAM-Gog-0047 ENSGGOP00000004443.2 Gorilla gorilla 44 2e-79 294
WERAM-Fia-0117 ENSFALP00000010126.1 Ficedula albicollis 38 1e-78 291
WERAM-Ptv-0077 ENSPVAP00000007213.1 Pteropus vampyrus 45 1e-78 291
WERAM-Sus-0177 ENSSSCP00000022636.1 Sus scrofa 45 4e-78 290
WERAM-Prc-0036 ENSPCAP00000003334.1 Procavia capensis 36 5e-78 290
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 37 1e-77 288
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 40 7e-77 285
WERAM-Tum-0026 CAZ84932 Tuber melanosporum 38 7e-77 285
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 40 8e-77 285
WERAM-Meg-0084 ENSMGAP00000008226.2 Meleagris gallopavo 39 1e-76 285
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 40 1e-76 285
WERAM-Lab-0047 EDQ99497 Laccaria bicolor 40 3e-76 283
WERAM-Orla-0013 ENSORLP00000001341.1 Oryzias latipes 38 5e-76 283
WERAM-Sah-0012 ENSSHAP00000001165.1 Sarcophilus harrisii 43 7e-76 282
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 38 8e-76 282
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 38 3e-75 280
WERAM-Asg-0010 AAS51704 Ashbya gossypii 35 3e-75 280
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 40 3e-75 280
WERAM-Pes-0141 ENSPSIP00000016742.1 Pelodiscus sinensis 34 3e-75 280
WERAM-Gaga-0090 ENSGALP00000014065.4 Gallus gallus 40 6e-75 279
WERAM-Anp-0022 ENSAPLP00000003127.1 Anas platyrhynchos 37 9e-75 278
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 39 2e-74 278
WERAM-Tut-0056 ENSTTRP00000004443.1 Tursiops truncatus 44 2e-74 278
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 40 5e-74 276
WERAM-Coi-0028 EAS30926 Coccidioides immitis 38 1e-73 275
WERAM-Cag-0018 CAG60803 Candida glabrata 36 1e-73 275
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 38 2e-73 274
WERAM-Yal-0023 CAG79971 Yarrowia lipolytica 38 3e-73 273
WERAM-Pug-0031 EFP89333 Puccinia graminis 38 3e-73 273
WERAM-Gaa-0053 ENSGACP00000006953.1 Gasterosteus aculeatus 38 4e-73 273
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 39 5e-73 273
WERAM-Pat-0122 ENSPTRP00000025053.4 Pan troglodytes 37 6e-73 273
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 37 6e-73 273
WERAM-Miv-0034 MVLG_04888T0 Microbotryum violaceum 39 6e-73 273
WERAM-Tag-0059 ENSTGUP00000004152.1 Taeniopygia guttata 40 7e-73 272
WERAM-Poa-0196 ENSPPYP00000022747.2 Pongo abelii 38 1e-72 271
WERAM-Nol-0005 ENSNLEP00000000692.2 Nomascus leucogenys 37 1e-72 271
WERAM-Tas-0021 ENSTSYP00000002661.1 Tarsius syrichta 43 2e-72 271
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 37 3e-72 270
WERAM-Mao-0002 MGG_01076T0 Magnaporthe oryzae 36 4e-72 270
WERAM-Usm-0012 UM02102P0 Ustilago maydis 39 5e-72 270
WERAM-Trv-0041 EHK18675 Trichoderma virens 37 2e-71 268
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 37 7e-71 266
WERAM-Put-0014 PTTG_07163P0 Puccinia triticina 37 8e-71 265
WERAM-Gag-0014 GGTG_04308T0 Gaeumannomyces graminis 37 1e-70 265
WERAM-Leo-0130 ENSLOCP00000016135.1 Lepisosteus oculatus 37 5e-70 263
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 39 1e-69 262
WERAM-Trr-0039 EGR46026 Trichoderma reesei 36 2e-69 261
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 37 2e-69 261
Created Date 25-Jun-2016