Tag |
Content |
WERAM ID |
WERAM-Lac-0157 |
Ensembl Protein ID |
ENSLACP00000018610.1 |
Gene Name |
HDAC10 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
3.30e-130 |
434.2 |
5 |
594 |
HDAC |
Class-I |
2.30e-34 |
119.6 |
8 |
319 |
|
Organism |
Latimeria chalumnae |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeelesltvdsd 90 ++l+yd++m++ + l++ ++ +E peR++ +++rl++ +lle+++++ r+at+e+++lvH +e++e ++t+++++ eel++++ ++ ENSLACP00000018610.1 5 TALIYDKEMTNYKLLWDYPACAIEVPERLSCSIERLKHYTLLERCVQVPVREATEEDILLVHRSEYLEAVKTTTSMDVEELKKFACNYT 93 689************************************************************************************** PP class-2.txt 91 siylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtq 179 ++y++++ +++arla Ga+l+lvd+vl+ ++ ng+a+vRPPGHH+++s+a+GFC+fnnva+aa+++++k+ +++ilivDwDvHhG+G+q ENSLACP00000018610.1 94 DVYFHQNIYHSARLALGATLQLVDSVLTEKVGNGMALVRPPGHHSQRSAANGFCVFNNVAIAAEYAKKKYGLNRILIVDWDVHHGQGIQ 182 ***************************************************************************************** PP class-2.txt 180 eifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaeg 268 +f++dp+vly+S+HRy++ +f+p++ ++++d+vg+g+g gfnvNv+wn+ +mg+a+ylaaf +v+lp+a+eF+P+lvlvsaG+D+a g ENSLACP00000018610.1 183 YTFEEDPSVLYFSWHRYEHQRFWPNLRDSDFDAVGNGRGAGFNVNVPWNKVGMGNADYLAAFFHVLLPMAYEFNPELVLVSAGYDSAIG 271 ***************************************************************************************** PP class-2.txt 269 dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 dp+g++ t++cy++lt+ l++la+g++++vlEGGynl++++e+v ++v++Llg ENSLACP00000018610.1 272 DPEGEMLATPECYSHLTHLLMSLASGKLCIVLEGGYNLRSLSESVCMTVQTLLG 325 ****************************************************96 PP class-2.txt 103 rlavGavlelvdkvlkgelkngfav 127 l G +le+ dk++k+e++n+++v ENSLACP00000018610.1 466 LLCLGNLLEVLDKIIKKEVRNSLVV 490 5678999999999999999999876 PP class-2.txt 236 eylaafrevvlpiakeFkPdlvlvsaGfDaaegd 269 + +af ++lp+a+e++Pdlv+++ G + + ENSLACP00000018610.1 561 DLFYAFFGLLLPLAYEYQPDLVMIALGPNSNIDT 594 4567999******************997776554 PP
HDAC Class-I
class-1.txt 6 aydedvgeyhy....gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge 90 +yd+++++y+ + +p+rls e + +y l ++ v ++a+ e++l +h+ ey+e +k+ ++ + ee lkkf+ ++ ENSLACP00000018610.1 8 IYDKEMTNYKLlwdyPACAIEVPERLSCSIERLKHYTLLERCVQVPVREATEEDILLVHRSEYLEAVKTTTSMDVEE----LKKFACNY 92 6888888887633325556679******************************************9998877766655....56777765 PP class-1.txt 91 .dcPvfdglfeycqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDg 174 d +++++ ++l Ga+l+ ++ + +++ +a+ hh+++s a Gfc n++ +a +kk+ +r+l +d d+hhG g ENSLACP00000018610.1 93 tDVYFHQNIYHSARLALGATLQLVDSVLTEKVGngMALVRPP-GHHSQRSAANGFCVFNNVAIAAEYAKKKYglNRILIVDWDVHHGQG 180 4888999*****************998777765115555444.59*******************99998864339************** PP class-1.txt 175 veeafyttdrvmtvsfhkygee.ffPg..tGdlsdvgaekgkyyavnvPlkd.gidDesyekifksviskvieafePeavvlqcGaDsl 259 ++ +f++ v+ s h+y+++ f+P d++ vg+++g + vnvP ++ g+ + y + f +v+ ++ f+Pe v++ G Ds ENSLACP00000018610.1 181 IQYTFEEDPSVLYFSWHRYEHQrFWPNlrDSDFDAVGNGRGAGFNVNVPWNKvGMGNADYLAAFFHVLLPMAYEFNPELVLVSAGYDSA 269 *******************9643899733578999**************96549*********************************** PP class-1.txt 260 agDrlgefnlsikghaecvkfvksf.nlpllvlGGGGYtlrnvaRcwtye 308 gD+ ge + + +++ +++ s +l ++ GGY+lr ++ ++ ENSLACP00000018610.1 270 IGDPEGEMLATPECYSHLTHLLMSLaSGKLCIVLEGGYNLRSLSESVCMT 319 **********************9996678889999******998654443 PP
|
Protein Sequence (Fasta) | MASGTALIYD KEMTNYKLLW DYPACAIEVP ERLSCSIERL KHYTLLERCV QVPVREATEE 60 DILLVHRSEY LEAVKTTTSM DVEELKKFAC NYTDVYFHQN IYHSARLALG ATLQLVDSVL 120 TEKVGNGMAL VRPPGHHSQR SAANGFCVFN NVAIAAEYAK KKYGLNRILI VDWDVHHGQG 180 IQYTFEEDPS VLYFSWHRYE HQRFWPNLRD SDFDAVGNGR GAGFNVNVPW NKVGMGNADY 240 LAAFFHVLLP MAYEFNPELV LVSAGYDSAI GDPEGEMLAT PECYSHLTHL LMSLASGKLC 300 IVLEGGYNLR SLSESVCMTV QTLLGDCVPQ IVGNLFPCLS AIESIQNVRA AHRQYWNFLK 360 HQGQTPAQPA PTSHVPEKAP RPLVLKTEET GKANGDAKNF DEFMDSHMRK VLLSTPPVRS 420 AAAVSARGDL ALERCLQIRA SEITKEEAVA FISGIDHECL QDRSILLCLG NLLEVLDKII 480 KKEVRNSLVV SPAVSVTSAF AVSWSIASGP NRVLLVTVGE MDIPFDIPSD GKILLLQISE 540 KFCSGLKRHY TATQENKSCG DLFYAFFGLL LPLAYEYQPD LVMIALGPNS NIDTTTVSHL 600 ISLLQGLGEG RTLVIVQERE SELRFVEFVA KMLLGDSAPA LGCASVNTHE NIMKLERQRQ 660 ELQQHWKMLQ HSGKVPV 677Protein Fasta Sequence
>ENSLACP00000018610.1|Class-I|Latimeria chalumnae MASGTALIYDKEMTNYKLLWDYPACAIEVPERLSCSIERLKHYTLLERCVQVPVREATEEDILLVHRSEYLEAVKTTTSMDVEELKKFACNYTDVYFHQNIYHSARLALGATLQLVDSVLTEKVGNGMALVRPPGHHSQRSAANGFCVFNNVAIAAEYAKKKYGLNRILIVDWDVHHGQGIQYTFEEDPSVLYFSWHRYEHQRFWPNLRDSDFDAVGNGRGAGFNVNVPWNKVGMGNADYLAAFFHVLLPMAYEFNPELVLVSAGYDSAIGDPEGEMLATPECYSHLTHLLMSLASGKLCIVLEGGYNLRSLSESVCMTVQTLLGDCVPQIVGNLFPCLSAIESIQNVRAAHRQYWNFLKHQGQTPAQPAPTSHVPEKAPRPLVLKTEETGKANGDAKNFDEFMDSHMRKVLLSTPPVRSAAAVSARGDLALERCLQIRASEITKEEAVAFISGIDHECLQDRSILLCLGNLLEVLDKIIKKEVRNSLVVSPAVSVTSAFAVSWSIASGPNRVLLVTVGEMDIPFDIPSDGKILLLQISEKFCSGLKRHYTATQENKSCGDLFYAFFGLLLPLAYEYQPDLVMIALGPNSNIDTTTVSHLISLLQGLGEGRTLVIVQERESELRFVEFVAKMLLGDSAPALGCASVNTHENIMKLERQRQELQQHWKMLQHSGKVPV
|
Nucleotide Sequence (Fasta) | CTTTTACTTG GATAATGAGA AAAGTTGTAT CTTGAAACAA ACAAAATAGC AGAAAAAGGA 60 GGCTCGAGGG TGGAAGAATA AGGCTTACAG GCAATAATTA TGGCATCTGG AACAGCATTG 120 ATTTACGACA AGGAAATGAC CAACTACAAA CTGCTGTGGG ACTACCCAGC ATGTGCTATT 180 GAAGTACCTG AAAGATTGTC CTGCTCCATC GAAAGACTGA AACACTACAC ACTGCTGGAG 240 AGATGTGTCC AGGTGCCTGT TAGAGAAGCA ACTGAGGAAG ACATTCTCTT GGTTCACAGG 300 TCAGAATACT TAGAAGCTGT AAAGACAACT ACTTCCATGG ATGTAGAAGA GCTGAAGAAA 360 TTTGCATGTA ATTACACTGA TGTTTATTTT CACCAGAACA TTTATCATTC TGCCAGACTG 420 GCTTTGGGGG CAACCCTGCA GCTAGTGGAC TCAGTGCTGA CGGAAAAAGT AGGAAACGGC 480 ATGGCACTGG TCAGACCTCC AGGCCACCAC AGCCAGAGAA GCGCAGCAAA CGGCTTTTGC 540 GTTTTTAACA ACGTTGCTAT AGCAGCAGAG TATGCCAAAA AGAAATATGG CCTTAACAGG 600 ATTCTTATAG TTGACTGGGA TGTGCACCAC GGACAAGGAA TCCAGTATAC GTTTGAAGAA 660 GATCCCAGTG TTCTGTACTT CTCCTGGCAT CGCTACGAGC ACCAGCGGTT CTGGCCCAAT 720 CTCCGAGACT CTGATTTTGA TGCTGTTGGT AATGGAAGAG GGGCAGGGTT CAATGTAAAT 780 GTGCCGTGGA ATAAGGTTGG AATGGGAAAT GCAGACTATT TAGCAGCGTT TTTCCATGTA 840 TTGCTTCCAA TGGCTTATGA GTTTAATCCT GAACTTGTTC TAGTTTCTGC TGGGTACGAC 900 TCAGCAATCG GTGACCCTGA GGGGGAGATG CTTGCCACAC CTGAGTGCTA TTCTCATCTC 960 ACTCACTTGC TGATGTCATT AGCCAGTGGA AAGCTCTGCA TTGTTTTAGA GGGTGGGTAC 1020 AATCTGCGCT CGCTGTCCGA ATCTGTCTGC ATGACAGTAC AGACTTTATT GGGTGACTGT 1080 GTGCCACAGA TAGTTGGTAA TCTATTTCCC TGTTTAAGCG CTATTGAATC CATTCAGAAC 1140 GTTCGAGCTG CACATCGACA GTATTGGAAC TTCTTAAAGC ACCAAGGCCA GACTCCCGCG 1200 CAACCTGCTC CTACAAGCCA TGTACCTGAG AAAGCACCCA GACCCTTGGT TTTAAAGACA 1260 GAAGAGACTG GCAAAGCAAA TGGAGATGCC AAGAATTTTG ACGAATTCAT GGACTCCCAC 1320 ATGAGGAAAG TCTTGCTCTC GACTCCTCCT GTCAGGTCTG CAGCTGCTGT CTCTGCACGT 1380 GGCGACTTAG CGCTGGAGCG CTGCCTGCAA ATCCGAGCGA GCGAGATTAC AAAGGAGGAA 1440 GCTGTGGCCT TCATCAGTGG TATTGATCAT GAGTGTCTTC AAGATAGAAG CATTCTGCTT 1500 TGCCTTGGAA ACCTGCTGGA AGTACTGGAT AAAATCATTA AAAAGGAGGT GAGGAACAGC 1560 TTGGTAGTTT CGCCTGCGGT TTCTGTTACA TCTGCATTTG CTGTGAGTTG GAGCATTGCA 1620 TCTGGGCCAA ACAGGGTACT TTTAGTCACT GTTGGAGAAA TGGACATTCC ATTTGACATT 1680 CCGAGTGATG GAAAAATTCT TTTGCTTCAG ATTTCTGAGA AATTCTGTTC AGGTTTAAAG 1740 AGACACTACA CTGCCACCCA GGAGAATAAA TCCTGTGGAG ATTTATTTTA TGCTTTCTTT 1800 GGTCTCCTCT TACCCTTGGC ATATGAGTAT CAGCCTGATT TAGTAATGAT TGCACTTGGG 1860 CCCAACAGCA ACATTGACAC AACCACAGTT TCTCACTTGA TCAGTTTATT GCAAGGACTA 1920 GGGGAGGGCC GTACTCTTGT AATTGTACAG GAAAGGGAAT CAGAGCTCAG ATTTGTGGAA 1980 TTTGTAGCCA AAATGTTACT AGGGGATTCT GCTCCTGCTT TGGGTTGTGC CTCTGTTAAC 2040 ACCCATGAGA ATATAATGAA GCTTGAAAGA CAAAGGCAAG AACTTCAGCA GCACTGGAAA 2100 ATGCTTCAGC ATTCAGGTAA GGTGCCTGTG TAA
2134Nucleotide Fasta Sequence
>ENSLACP00000018610.1|Class-I|Latimeria chalumnae CTTTTACTTGGATAATGAGAAAAGTTGTATCTTGAAACAAACAAAATAGCAGAAAAAGGAGGCTCGAGGGTGGAAGAATAAGGCTTACAGGCAATAATTATGGCATCTGGAACAGCATTGATTTACGACAAGGAAATGACCAACTACAAACTGCTGTGGGACTACCCAGCATGTGCTATTGAAGTACCTGAAAGATTGTCCTGCTCCATCGAAAGACTGAAACACTACACACTGCTGGAGAGATGTGTCCAGGTGCCTGTTAGAGAAGCAACTGAGGAAGACATTCTCTTGGTTCACAGGTCAGAATACTTAGAAGCTGTAAAGACAACTACTTCCATGGATGTAGAAGAGCTGAAGAAATTTGCATGTAATTACACTGATGTTTATTTTCACCAGAACATTTATCATTCTGCCAGACTGGCTTTGGGGGCAACCCTGCAGCTAGTGGACTCAGTGCTGACGGAAAAAGTAGGAAACGGCATGGCACTGGTCAGACCTCCAGGCCACCACAGCCAGAGAAGCGCAGCAAACGGCTTTTGCGTTTTTAACAACGTTGCTATAGCAGCAGAGTATGCCAAAAAGAAATATGGCCTTAACAGGATTCTTATAGTTGACTGGGATGTGCACCACGGACAAGGAATCCAGTATACGTTTGAAGAAGATCCCAGTGTTCTGTACTTCTCCTGGCATCGCTACGAGCACCAGCGGTTCTGGCCCAATCTCCGAGACTCTGATTTTGATGCTGTTGGTAATGGAAGAGGGGCAGGGTTCAATGTAAATGTGCCGTGGAATAAGGTTGGAATGGGAAATGCAGACTATTTAGCAGCGTTTTTCCATGTATTGCTTCCAATGGCTTATGAGTTTAATCCTGAACTTGTTCTAGTTTCTGCTGGGTACGACTCAGCAATCGGTGACCCTGAGGGGGAGATGCTTGCCACACCTGAGTGCTATTCTCATCTCACTCACTTGCTGATGTCATTAGCCAGTGGAAAGCTCTGCATTGTTTTAGAGGGTGGGTACAATCTGCGCTCGCTGTCCGAATCTGTCTGCATGACAGTACAGACTTTATTGGGTGACTGTGTGCCACAGATAGTTGGTAATCTATTTCCCTGTTTAAGCGCTATTGAATCCATTCAGAACGTTCGAGCTGCACATCGACAGTATTGGAACTTCTTAAAGCACCAAGGCCAGACTCCCGCGCAACCTGCTCCTACAAGCCATGTACCTGAGAAAGCACCCAGACCCTTGGTTTTAAAGACAGAAGAGACTGGCAAAGCAAATGGAGATGCCAAGAATTTTGACGAATTCATGGACTCCCACATGAGGAAAGTCTTGCTCTCGACTCCTCCTGTCAGGTCTGCAGCTGCTGTCTCTGCACGTGGCGACTTAGCGCTGGAGCGCTGCCTGCAAATCCGAGCGAGCGAGATTACAAAGGAGGAAGCTGTGGCCTTCATCAGTGGTATTGATCATGAGTGTCTTCAAGATAGAAGCATTCTGCTTTGCCTTGGAAACCTGCTGGAAGTACTGGATAAAATCATTAAAAAGGAGGTGAGGAACAGCTTGGTAGTTTCGCCTGCGGTTTCTGTTACATCTGCATTTGCTGTGAGTTGGAGCATTGCATCTGGGCCAAACAGGGTACTTTTAGTCACTGTTGGAGAAATGGACATTCCATTTGACATTCCGAGTGATGGAAAAATTCTTTTGCTTCAGATTTCTGAGAAATTCTGTTCAGGTTTAAAGAGACACTACACTGCCACCCAGGAGAATAAATCCTGTGGAGATTTATTTTATGCTTTCTTTGGTCTCCTCTTACCCTTGGCATATGAGTATCAGCCTGATTTAGTAATGATTGCACTTGGGCCCAACAGCAACATTGACACAACCACAGTTTCTCACTTGATCAGTTTATTGCAAGGACTAGGGGAGGGCCGTACTCTTGTAATTGTACAGGAAAGGGAATCAGAGCTCAGATTTGTGGAATTTGTAGCCAAAATGTTACTAGGGGATTCTGCTCCTGCTTTGGGTTGTGCCTCTGTTAACACCCATGAGAATATAATGAAGCTTGAAAGACAAAGGCAAGAACTTCAGCAGCACTGGAAAATGCTTCAGCATTCAGGTAAGGTGCCTGTGTAA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |