Tag |
Content |
WERAM ID |
WERAM-Orr-0082 |
Ensembl Protein ID |
ORUFI07G22240.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
3.80e-125 |
418.6 |
13 |
424 |
HDAC |
Class-I |
5.90e-40 |
139 |
17 |
326 |
|
Organism |
Oryza rufipogon |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletae.klekeelesltvdsdsiyl 94 +gl+yde+m++h+++ +++ hpE+peR++ai+++l++ g++++++ +ka++a+++ +++vHs++h++l+++ + k +++ ++++ +++siy+ ORUFI07G22240.1 13 VGLLYDERMCAHATPDGEE--HPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISsKEYDSRRNKIARKFNSIYF 104 689************9999..***************************************************998888999999********** PP class-2.txt 95 esksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk...vkkilivDwDvHhGnGtqeifykd 185 ++ s+++a la+G+v+e+++kv++gel+ ++a+vRPPGHHae+++amGFClfnnva+aa +l+++ + +kkilivDwDvHhGnGtq++fy+d ORUFI07G22240.1 105 NKGSSESAFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTdlgIKKILIVDWDVHHGNGTQKMFYSD 198 **************************************************************99877777************************ PP class-2.txt 186 pkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtak 279 p+vl++S+HR+d gsf+p+ g++++ +geg+g+g+n+Nv+w++g++gda+y+aa+++v+lp+a+ F+Pd+vlvsaGfDaa gdplgg+++t++ ORUFI07G22240.1 199 PRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEHGKCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPN 292 ********************************************************************************************** PP class-2.txt 280 cyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 +ya l +ll++a+gr+v++lEGGynl++ia++v+a++k+Llg ORUFI07G22240.1 293 GYALLLTKLLGFAQGRIVMALEGGYNLRSIANSVSACAKVLLG 335 *****************************************96 PP class-2.txt 258 lvsaGfDaaeg...dplgglsvtakcyatltkqllkl 291 l s+G D+ d+++++++ +y+ + ++l+kl ORUFI07G22240.1 388 LYSSGSDSEVEdlpDAIASVNIIQITYGIISESLSKL 424 6799999987777888888888889999999998887 PP
HDAC Class-I
class-1.txt 7 ydedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeels.kelkkfnvgedcPvfdg 97 yde++ + + g++hp p+rl+ + + + g+ + i+k+k+a+ ++++++hs+++i++++++++++ ++ k +kfn +g ORUFI07G22240.1 17 YDERMCAHATpdGEEHPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISSKEYDSRRnKIARKFNSI---YFNKG 107 555555444344899***********9999999***********************************999887662556778743...45578 PP class-1.txt 98 lfeycqlitGasleaakkLnkkeadiainwa.GGlhhakkseasGfcyvnDivlailellkk.....hkrvlyididlhhGDgveeafyttdrv 185 e + l +G+ +e a+k+ +e ai hha ++ea Gfc n++ +a ll + k++l +d d+hhG+g ++ fy rv ORUFI07G22240.1 108 SSESAFLAAGSVIEVAEKVAAGELSSAIALVrPPGHHAEHNEAMGFCLFNNVAIAADYLLNErtdlgIKKILIVDWDVHHGNGTQKMFYSDPRV 201 88999999*************99888887641456********************99998742233369************************* PP class-1.txt 186 mtvsfhkyge.effPgtGdlsd..vgaekgkyyavnvPlkdg.idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikgha 275 + s+h+++ +f+P+ Gd s +g+++gk y +nvP ++g + D y + +v+ +v eaf+P++v++ G D+ gD+lg ++ +g+a ORUFI07G22240.1 202 LFFSVHRFDYgSFYPAEGDASYcfIGEGDGKGYNINVPWEHGkCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPNGYA 295 *******98525*******986447999*************9899************************************************* PP class-1.txt 276 ecvkfvksf.nlpllvlGGGGYtlrnvaRcw 305 + + f + +++ GGY+lr +a ORUFI07G22240.1 296 LLLTKLLGFaQGRIVMALEGGYNLRSIANSV 326 *999999996778888889******999765 PP
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Protein Sequence (Fasta) | MAAATTAAAA ARVGLLYDER MCAHATPDGE EHPENPERLR AIWRKLSADG VASRCMIMKA 60 KEAEDKYIAS VHSQNHIKLM RSISSKEYDS RRNKIARKFN SIYFNKGSSE SAFLAAGSVI 120 EVAEKVAAGE LSSAIALVRP PGHHAEHNEA MGFCLFNNVA IAADYLLNER TDLGIKKILI 180 VDWDVHHGNG TQKMFYSDPR VLFFSVHRFD YGSFYPAEGD ASYCFIGEGD GKGYNINVPW 240 EHGKCGDADY IAAWDHVLLP VAEAFNPDIV LVSAGFDAAL GDPLGGCCIT PNGYALLLTK 300 LLGFAQGRIV MALEGGYNLR SIANSVSACA KVLLGDKFRF DTPDMQPFES SWRVIQAVRD 360 ELKTFWPVLS NRLPENISLR SRPSQIELYS SGSDSEVEDL PDAIASVNII QITYGIISES 420 LSKLNLDEDK IATKTTSSNV MVEGPTDSVE PQNDGSAAVS TEGISSLSST WRSELSKVYV 480 WYASFGSNMW TPRFLCYIQG GKAEGMNIPC FGSHDTSPPR GSMWKTVPHR LFFGRSSTPC 540 WGTGGVAFLN PEINHTENSY VCMYKITLEQ FNDVLFQENR LVKENGESGK TESPDSPLIG 600 LSEIEFVSRN KGVHLAPIKD SWYSNVLYLG EEDNLPILTM TCPSSDVERC RSGELPLCPP 660 SKTYSATLIR GLMEGKHLDA DAAASYINTA ATRGL 695Protein Fasta Sequence
>ORUFI07G22240.1|Class-I|Oryza rufipogon MAAATTAAAAARVGLLYDERMCAHATPDGEEHPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISSKEYDSRRNKIARKFNSIYFNKGSSESAFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTDLGIKKILIVDWDVHHGNGTQKMFYSDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEHGKCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAQGRIVMALEGGYNLRSIANSVSACAKVLLGDKFRFDTPDMQPFESSWRVIQAVRDELKTFWPVLSNRLPENISLRSRPSQIELYSSGSDSEVEDLPDAIASVNIIQITYGIISESLSKLNLDEDKIATKTTSSNVMVEGPTDSVEPQNDGSAAVSTEGISSLSSTWRSELSKVYVWYASFGSNMWTPRFLCYIQGGKAEGMNIPCFGSHDTSPPRGSMWKTVPHRLFFGRSSTPCWGTGGVAFLNPEINHTENSYVCMYKITLEQFNDVLFQENRLVKENGESGKTESPDSPLIGLSEIEFVSRNKGVHLAPIKDSWYSNVLYLGEEDNLPILTMTCPSSDVERCRSGELPLCPPSKTYSATLIRGLMEGKHLDADAAASYINTAATRGL
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Nucleotide Sequence (Fasta) | GCTCCATTTC CGAATCGTCG TCTCGCCTCC ACTTCCGACT TCCGAGTCGT CTCGCCTCGC 60 CGGCGCAGGA TGGCGGCGGC GACGACCGCC GCGGCGGCGG CGAGGGTGGG GCTGCTGTAC 120 GACGAGAGGA TGTGCGCGCA CGCGACGCCC GACGGGGAGG AGCACCCGGA GAACCCCGAG 180 AGGCTGCGGG CCATCTGGCG CAAGCTCTCC GCCGACGGCG TCGCCTCCAG GTGCATGATC 240 ATGAAAGCGA AGGAAGCTGA GGACAAGTAT ATAGCTTCTG TCCATAGCCA GAACCATATC 300 AAGCTGATGA GGAGTATCAG CTCAAAAGAA TATGATTCCC GTCGAAACAA GATTGCTAGA 360 AAATTTAATT CCATTTACTT CAACAAGGGC TCCTCAGAGT CTGCTTTTCT TGCAGCTGGT 420 TCTGTGATTG AGGTAGCTGA GAAGGTTGCT GCAGGAGAGT TAAGTTCTGC TATTGCTCTA 480 GTCCGACCTC CAGGTCACCA TGCTGAACAT AATGAGGCAA TGGGTTTTTG CCTCTTCAAC 540 AATGTAGCAA TTGCTGCTGA TTATCTCTTA AATGAGAGGA CTGACTTAGG TATCAAGAAG 600 ATATTGATTG TCGATTGGGA TGTTCATCAT GGAAATGGCA CACAAAAGAT GTTTTATAGT 660 GATCCTCGTG TATTGTTCTT TTCAGTTCAC AGATTTGATT ATGGCAGCTT CTATCCTGCT 720 GAAGGGGATG CATCTTACTG TTTCATTGGG GAAGGAGATG GTAAAGGGTA CAACATTAAC 780 GTGCCCTGGG AACATGGAAA ATGTGGTGAT GCAGATTATA TTGCTGCATG GGACCATGTA 840 CTACTTCCTG TTGCTGAAGC ATTTAACCCT GATATAGTCT TGGTGTCTGC TGGGTTTGAT 900 GCAGCACTGG GTGATCCTCT TGGTGGCTGC TGCATCACTC CCAATGGATA TGCTCTGCTA 960 CTGACAAAGC TCTTAGGTTT TGCCCAAGGG AGGATAGTGA TGGCTCTTGA AGGAGGCTAT 1020 AACCTTAGAT CCATAGCAAA TTCAGTTAGT GCTTGTGCTA AAGTTTTGTT GGGAGACAAG 1080 TTCAGATTTG ACACTCCTGA TATGCAACCG TTTGAATCTT CATGGAGAGT TATACAAGCG 1140 GTACGTGATG AATTGAAGAC GTTCTGGCCT GTTCTGAGTA ATAGATTGCC AGAGAATATA 1200 TCATTGAGGA GTAGGCCCTC ACAAATTGAG CTGTATTCTT CTGGTTCTGA CTCTGAAGTT 1260 GAAGATCTCC CTGATGCTAT TGCTTCTGTC AATATTATTC AAATTACTTA TGGTATTATA 1320 AGTGAAAGCC TCTCAAAGTT GAACCTTGAT GAAGACAAAA TCGCAACAAA GACCACCTCA 1380 AGTAATGTAA TGGTTGAAGG TCCAACTGAT TCAGTTGAAC CACAAAATGA TGGATCTGCT 1440 GCGGTGTCAA CTGAAGGAAT ATCATCTCTA TCTTCTACTT GGAGATCAGA ACTGTCAAAA 1500 GTATATGTTT GGTATGCCAG CTTTGGTTCA AACATGTGGA CACCAAGGTT TCTGTGCTAC 1560 ATCCAAGGGG GAAAGGCTGA GGGTATGAAT ATACCATGTT TTGGATCTCA TGACACAAGC 1620 CCACCAAGAG GTTCCATGTG GAAGACTGTG CCTCATAGAT TGTTTTTTGG TAGATCCTCT 1680 ACTCCTTGCT GGGGAACTGG TGGTGTTGCT TTTCTCAACC CTGAGATAAA CCACACTGAG 1740 AACTCCTATG TCTGCATGTA TAAAATAACG CTCGAGCAGT TCAATGATGT ATTGTTTCAA 1800 GAGAATCGTT TAGTGAAGGA GAACGGCGAA AGTGGAAAAA CTGAGTCTCC TGACTCTCCT 1860 TTGATTGGCT TGTCTGAAAT AGAGTTTGTT TCCAGAAACA AGGGTGTCCA CCTTGCACCT 1920 ATTAAGGATA GCTGGTACTC CAATGTACTT TACCTTGGGG AGGAGGATAA CCTTCCAATT 1980 CTTACAATGA CATGCCCGTC ATCAGACGTA GAGCGATGCA GATCCGGAGA GCTGCCATTG 2040 TGTCCTCCAT CCAAGACCTA CTCCGCCACC CTGATAAGGG GACTAATGGA AGGGAAGCAC 2100 CTGGATGCAG ATGCGGCCGC TAGTTACATC AACACTGCAG CTACCAGAGG CCTGTGAAGG 2160 CTGCTTCCCT ATGCATTATG GTTTGTAGTT TTGCACTTAC GCGCTTAGTT TGTACAGCCA 2220 GTAGGAGCGT ACTAGGACTG TAGGAGGAAT GATGAGTAGG TTTGCAGGAC TGTAAAGATA 2280 GTGCGTTGAT CATTCAGGAC CACGGGGGCT TATGTAGAGG CCTCGTGAAT GTCCTGCCAA 2340 TTGGGGAATC TGGACCCGAT CAAGTTTCCC TAGGATTGTT AAGAATCTAG CTAGCGCTTG 2400 TACCCTGGGT TGGTCATTGT CTCATTGGTG CTCTCCGGAT TGGTTTGTTT TGGGGTGGAA 2460 AAAAAAACAC TAGTCGATGT TGCCTGGTTT TTCATGCTGT TACCTGGCGA GGAAATGACG 2520 ATTTCTTGTG ATTTCCCTTT TCTTTTGGAG GTAGAGTTGT ATGAGGTATG GGGTGCCGTG 2580 CTCAGGACTC AGGAGA
2597Nucleotide Fasta Sequence
>ORUFI07G22240.1|Class-I|Oryza rufipogon GCTCCATTTCCGAATCGTCGTCTCGCCTCCACTTCCGACTTCCGAGTCGTCTCGCCTCGCCGGCGCAGGATGGCGGCGGCGACGACCGCCGCGGCGGCGGCGAGGGTGGGGCTGCTGTACGACGAGAGGATGTGCGCGCACGCGACGCCCGACGGGGAGGAGCACCCGGAGAACCCCGAGAGGCTGCGGGCCATCTGGCGCAAGCTCTCCGCCGACGGCGTCGCCTCCAGGTGCATGATCATGAAAGCGAAGGAAGCTGAGGACAAGTATATAGCTTCTGTCCATAGCCAGAACCATATCAAGCTGATGAGGAGTATCAGCTCAAAAGAATATGATTCCCGTCGAAACAAGATTGCTAGAAAATTTAATTCCATTTACTTCAACAAGGGCTCCTCAGAGTCTGCTTTTCTTGCAGCTGGTTCTGTGATTGAGGTAGCTGAGAAGGTTGCTGCAGGAGAGTTAAGTTCTGCTATTGCTCTAGTCCGACCTCCAGGTCACCATGCTGAACATAATGAGGCAATGGGTTTTTGCCTCTTCAACAATGTAGCAATTGCTGCTGATTATCTCTTAAATGAGAGGACTGACTTAGGTATCAAGAAGATATTGATTGTCGATTGGGATGTTCATCATGGAAATGGCACACAAAAGATGTTTTATAGTGATCCTCGTGTATTGTTCTTTTCAGTTCACAGATTTGATTATGGCAGCTTCTATCCTGCTGAAGGGGATGCATCTTACTGTTTCATTGGGGAAGGAGATGGTAAAGGGTACAACATTAACGTGCCCTGGGAACATGGAAAATGTGGTGATGCAGATTATATTGCTGCATGGGACCATGTACTACTTCCTGTTGCTGAAGCATTTAACCCTGATATAGTCTTGGTGTCTGCTGGGTTTGATGCAGCACTGGGTGATCCTCTTGGTGGCTGCTGCATCACTCCCAATGGATATGCTCTGCTACTGACAAAGCTCTTAGGTTTTGCCCAAGGGAGGATAGTGATGGCTCTTGAAGGAGGCTATAACCTTAGATCCATAGCAAATTCAGTTAGTGCTTGTGCTAAAGTTTTGTTGGGAGACAAGTTCAGATTTGACACTCCTGATATGCAACCGTTTGAATCTTCATGGAGAGTTATACAAGCGGTACGTGATGAATTGAAGACGTTCTGGCCTGTTCTGAGTAATAGATTGCCAGAGAATATATCATTGAGGAGTAGGCCCTCACAAATTGAGCTGTATTCTTCTGGTTCTGACTCTGAAGTTGAAGATCTCCCTGATGCTATTGCTTCTGTCAATATTATTCAAATTACTTATGGTATTATAAGTGAAAGCCTCTCAAAGTTGAACCTTGATGAAGACAAAATCGCAACAAAGACCACCTCAAGTAATGTAATGGTTGAAGGTCCAACTGATTCAGTTGAACCACAAAATGATGGATCTGCTGCGGTGTCAACTGAAGGAATATCATCTCTATCTTCTACTTGGAGATCAGAACTGTCAAAAGTATATGTTTGGTATGCCAGCTTTGGTTCAAACATGTGGACACCAAGGTTTCTGTGCTACATCCAAGGGGGAAAGGCTGAGGGTATGAATATACCATGTTTTGGATCTCATGACACAAGCCCACCAAGAGGTTCCATGTGGAAGACTGTGCCTCATAGATTGTTTTTTGGTAGATCCTCTACTCCTTGCTGGGGAACTGGTGGTGTTGCTTTTCTCAACCCTGAGATAAACCACACTGAGAACTCCTATGTCTGCATGTATAAAATAACGCTCGAGCAGTTCAATGATGTATTGTTTCAAGAGAATCGTTTAGTGAAGGAGAACGGCGAAAGTGGAAAAACTGAGTCTCCTGACTCTCCTTTGATTGGCTTGTCTGAAATAGAGTTTGTTTCCAGAAACAAGGGTGTCCACCTTGCACCTATTAAGGATAGCTGGTACTCCAATGTACTTTACCTTGGGGAGGAGGATAACCTTCCAATTCTTACAATGACATGCCCGTCATCAGACGTAGAGCGATGCAGATCCGGAGAGCTGCCATTGTGTCCTCCATCCAAGACCTACTCCGCCACCCTGATAAGGGGACTAATGGAAGGGAAGCACCTGGATGCAGATGCGGCCGCTAGTTACATCAACACTGCAGCTACCAGAGGCCTGTGAAGGCTGCTTCCCTATGCATTATGGTTTGTAGTTTTGCACTTACGCGCTTAGTTTGTACAGCCAGTAGGAGCGTACTAGGACTGTAGGAGGAATGATGAGTAGGTTTGCAGGACTGTAAAGATAGTGCGTTGATCATTCAGGACCACGGGGGCTTATGTAGAGGCCTCGTGAATGTCCTGCCAATTGGGGAATCTGGACCCGATCAAGTTTCCCTAGGATTGTTAAGAATCTAGCTAGCGCTTGTACCCTGGGTTGGTCATTGTCTCATTGGTGCTCTCCGGATTGGTTTGTTTTGGGGTGGAAAAAAAAACACTAGTCGATGTTGCCTGGTTTTTCATGCTGTTACCTGGCGAGGAAATGACGATTTCTTGTGATTTCCCTTTTCTTTTGGAGGTAGAGTTGTATGAGGTATGGGGTGCCGTGCTCAGGACTCAGGAGA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |