Tag |
Content |
WERAM ID |
WERAM-Orgl-0076 |
Ensembl Protein ID |
OGLUM07G21150.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
5.00e-125 |
418.2 |
13 |
335 |
HDAC |
Class-I |
5.70e-40 |
139 |
17 |
326 |
|
Organism |
Oryza glumaepatula |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletae.klekeelesltvdsdsiyl 94 +gl+yde+m++h+++ +++ hpE+peR++ai+++l++ g++++++ +ka++a+++ +++vHs++h++l+++ + k +++ ++++ +++siy+ OGLUM07G21150.1 13 VGLLYDERMCAHATPDGEE--HPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISsKEYDSRRNKIARKFNSIYF 104 689************9999..***************************************************998888999999********** PP class-2.txt 95 esksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk...vkkilivDwDvHhGnGtqeifykd 185 ++ s+++a la+G+v+e+++kv++gel+ ++a+vRPPGHHae+++amGFClfnnva+aa +l+++ + +kkilivDwDvHhGnGtq++fy+d OGLUM07G21150.1 105 NKGSSESAFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTdlgIKKILIVDWDVHHGNGTQKMFYSD 198 **************************************************************99877777************************ PP class-2.txt 186 pkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtak 279 p+vl++S+HR+d gsf+p+ g++++ +geg+g+g+n+Nv+w++g++gda+y+aa+++v+lp+a+ F+Pd+vlvsaGfDaa gdplgg+++t++ OGLUM07G21150.1 199 PRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEHGKCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPN 292 ********************************************************************************************** PP class-2.txt 280 cyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 +ya l +ll++a+gr+v++lEGGynl++ia++v+a++k+Llg OGLUM07G21150.1 293 GYALLLTKLLGFAQGRIVMALEGGYNLRSIANSVSACAKVLLG 335 *****************************************96 PP
HDAC Class-I
class-1.txt 7 ydedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeels.kelkkfnvgedcPvfdg 97 yde++ + + g++hp p+rl+ + + + g+ + i+k+k+a+ ++++++hs+++i++++++++++ ++ k +kfn +g OGLUM07G21150.1 17 YDERMCAHATpdGEEHPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISSKEYDSRRnKIARKFNSI---YFNKG 107 555555444344899***********9999999***********************************999887662556778743...45578 PP class-1.txt 98 lfeycqlitGasleaakkLnkkeadiainwa.GGlhhakkseasGfcyvnDivlailellkk.....hkrvlyididlhhGDgveeafyttdrv 185 e + l +G+ +e a+k+ +e ai hha ++ea Gfc n++ +a ll + k++l +d d+hhG+g ++ fy rv OGLUM07G21150.1 108 SSESAFLAAGSVIEVAEKVAAGELSSAIALVrPPGHHAEHNEAMGFCLFNNVAIAADYLLNErtdlgIKKILIVDWDVHHGNGTQKMFYSDPRV 201 88999999*************99888887641456********************99998742233369************************* PP class-1.txt 186 mtvsfhkyge.effPgtGdlsd..vgaekgkyyavnvPlkdg.idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikgha 275 + s+h+++ +f+P+ Gd s +g+++gk y +nvP ++g + D y + +v+ +v eaf+P++v++ G D+ gD+lg ++ +g+a OGLUM07G21150.1 202 LFFSVHRFDYgSFYPAEGDASYcfIGEGDGKGYNINVPWEHGkCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPNGYA 295 *******98525*******986447999*************9899************************************************* PP class-1.txt 276 ecvkfvksf.nlpllvlGGGGYtlrnvaRcw 305 + + f + +++ GGY+lr +a OGLUM07G21150.1 296 LLLTKLLGFaQGRIVMALEGGYNLRSIANSV 326 *999999996778888889******999765 PP
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Protein Sequence (Fasta) | MAAATTAAAA ARVGLLYDER MCAHATPDGE EHPENPERLR AIWRKLSADG VASRCMIMKA 60 KEAEDKYIAS VHSQNHIKLM RSISSKEYDS RRNKIARKFN SIYFNKGSSE SAFLAAGSVI 120 EVAEKVAAGE LSSAIALVRP PGHHAEHNEA MGFCLFNNVA IAADYLLNER TDLGIKKILI 180 VDWDVHHGNG TQKMFYSDPR VLFFSVHRFD YGSFYPAEGD ASYCFIGEGD GKGYNINVPW 240 EHGKCGDADY IAAWDHVLLP VAEAFNPDIV LVSAGFDAAL GDPLGGCCIT PNGYALLLTK 300 LLGFAQGRIV MALEGGYNLR SIANSVSACA KVLLGDKFRF DTPDMQPFES SWRVIQAVRD 360 ELKTFWPVLS NRLPENISLR SRPSQIELYS SGSDSEVEDL PDAIASVNII QITDGIISES 420 LSKLNLDEDK IATKTTSSNV MVEGPTDSVE PQNDGSAAVS TEGISSLSST WRSELSKVYV 480 WYASFGSNMW TPRFLCYIQG GKAEGMNIPC FGSHDTSPPR GSMWKTVPHR LFFGRSSTPC 540 WGTGGVAFLN PEINHTENSY VCMYKITLEQ FNDVLFQENR LVKENGESGK TESPDSPLIG 600 LSEIEFVSRN KGVHLAPIKD SWYSNVLYLG EEDNLPILTM TCPSSDVERC RSGELPLCPP 660 SKTYSATLIR GLMEGKHLDA DAAASYINTA ATRGL 695Protein Fasta Sequence
>OGLUM07G21150.1|Class-I|Oryza glumaepatula MAAATTAAAAARVGLLYDERMCAHATPDGEEHPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISSKEYDSRRNKIARKFNSIYFNKGSSESAFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTDLGIKKILIVDWDVHHGNGTQKMFYSDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEHGKCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAQGRIVMALEGGYNLRSIANSVSACAKVLLGDKFRFDTPDMQPFESSWRVIQAVRDELKTFWPVLSNRLPENISLRSRPSQIELYSSGSDSEVEDLPDAIASVNIIQITDGIISESLSKLNLDEDKIATKTTSSNVMVEGPTDSVEPQNDGSAAVSTEGISSLSSTWRSELSKVYVWYASFGSNMWTPRFLCYIQGGKAEGMNIPCFGSHDTSPPRGSMWKTVPHRLFFGRSSTPCWGTGGVAFLNPEINHTENSYVCMYKITLEQFNDVLFQENRLVKENGESGKTESPDSPLIGLSEIEFVSRNKGVHLAPIKDSWYSNVLYLGEEDNLPILTMTCPSSDVERCRSGELPLCPPSKTYSATLIRGLMEGKHLDADAAASYINTAATRGL
|
Nucleotide Sequence (Fasta) | TCTTCCCCCG CTCCATTTCC GAATCGTCGT CTCGCCTCCA CTTCCGACTT CCGAGTCGTC 60 TCGCCTCGCC GGCGCAGGAT GGCGGCGGCG ACGACCGCCG CGGCGGCGGC GAGGGTGGGG 120 CTGCTGTACG ACGAGAGGAT GTGCGCGCAC GCGACGCCCG ACGGGGAGGA GCACCCGGAG 180 AACCCCGAGA GGCTGCGGGC CATCTGGCGC AAGCTCTCCG CCGACGGCGT CGCCTCCAGG 240 TGCATGATCA TGAAAGCGAA GGAAGCTGAG GACAAGTATA TAGCTTCTGT CCATAGCCAG 300 AACCATATCA AGCTGATGAG GAGTATCAGC TCAAAAGAAT ATGATTCCCG TCGAAACAAG 360 ATTGCTAGAA AATTTAATTC CATTTACTTC AACAAGGGCT CCTCAGAGTC TGCTTTTCTT 420 GCAGCTGGTT CTGTGATTGA GGTAGCTGAG AAGGTTGCTG CAGGAGAGTT AAGTTCTGCT 480 ATTGCTCTAG TCCGACCTCC AGGTCACCAT GCTGAGCATA ATGAGGCAAT GGGTTTTTGC 540 CTCTTCAACA ATGTAGCAAT TGCTGCTGAT TATCTCTTAA ATGAGAGGAC TGACTTAGGT 600 ATCAAGAAGA TATTGATTGT AGATTGGGAT GTTCATCATG GAAATGGCAC ACAAAAGATG 660 TTTTATAGTG ATCCTCGTGT ATTGTTCTTT TCAGTTCACA GATTTGATTA TGGCAGCTTC 720 TATCCTGCTG AAGGGGATGC ATCTTACTGT TTCATTGGGG AAGGAGATGG TAAAGGGTAC 780 AACATTAACG TGCCCTGGGA ACATGGAAAA TGTGGTGATG CAGATTATAT TGCTGCATGG 840 GACCATGTAC TACTTCCTGT TGCTGAAGCA TTTAACCCTG ATATAGTCTT GGTGTCTGCT 900 GGGTTTGATG CAGCACTGGG TGATCCTCTT GGTGGCTGCT GCATCACTCC CAATGGATAT 960 GCTCTGCTAC TGACAAAGCT CTTAGGTTTT GCCCAAGGGA GGATAGTGAT GGCTCTTGAA 1020 GGAGGCTATA ACCTTAGATC CATAGCAAAT TCAGTTAGTG CTTGTGCTAA AGTTTTGTTG 1080 GGAGACAAGT TCAGATTTGA CACTCCTGAT ATGCAACCGT TTGAATCTTC ATGGAGAGTT 1140 ATACAAGCGG TACGTGATGA ATTGAAGACG TTCTGGCCTG TTCTGAGTAA TAGATTGCCA 1200 GAGAATATAT CATTGAGGAG TAGGCCCTCA CAAATTGAGC TGTATTCTTC TGGTTCTGAC 1260 TCTGAAGTTG AAGATCTCCC TGATGCTATT GCTTCTGTCA ATATTATTCA AATTACTGAT 1320 GGTATTATAA GTGAAAGCCT CTCAAAGTTG AACCTTGATG AAGACAAAAT CGCAACAAAG 1380 ACCACCTCAA GTAATGTAAT GGTTGAAGGT CCAACTGATT CAGTTGAACC ACAAAATGAT 1440 GGATCTGCTG CGGTGTCAAC TGAAGGAATA TCATCTCTAT CTTCTACTTG GAGATCAGAA 1500 CTGTCAAAAG TATATGTTTG GTATGCCAGC TTTGGTTCAA ACATGTGGAC ACCAAGGTTT 1560 CTGTGCTACA TCCAAGGGGG AAAGGCTGAG GGTATGAATA TACCATGTTT TGGATCTCAT 1620 GACACAAGCC CACCAAGAGG TTCCATGTGG AAGACTGTGC CTCATAGATT GTTTTTTGGT 1680 AGATCCTCTA CTCCTTGCTG GGGAACTGGT GGTGTTGCTT TTCTCAACCC TGAGATAAAC 1740 CACACTGAGA ACTCCTATGT CTGCATGTAT AAAATAACGC TCGAGCAGTT CAATGATGTA 1800 TTGTTTCAAG AGAATCGTTT AGTGAAGGAG AACGGCGAAA GTGGAAAAAC TGAGTCTCCT 1860 GACTCTCCTT TGATTGGCTT GTCTGAAATA GAGTTTGTTT CCAGAAACAA GGGTGTCCAC 1920 CTTGCACCTA TTAAGGATAG CTGGTACTCC AATGTACTTT ACCTTGGGGA GGAGGATAAC 1980 CTTCCAATTC TTACAATGAC ATGCCCGTCA TCAGACGTAG AGCGATGCAG ATCCGGAGAG 2040 CTGCCATTGT GTCCTCCATC CAAGACCTAC TCCGCCACCC TGATAAGGGG ACTAATGGAA 2100 GGGAAGCACC TGGATGCAGA TGCGGCCGCT AGTTACATCA ACACTGCAGC TACCAGAGGC 2160 CTGTGAAGGC TGCTTCCCTA TGCATTATGG TTTGTAGTTT TGCACTTACG CGCTTAGTTT 2220 GTACAGCCAG TAGGAGCGTA CTAGGACTGT AGGAGGAATG ATGAGTAGGT TTGCAGGACT 2280 GTAAAGATAG TGCGTTGTTC ATTCAGGACC ACGGGGGCTT ATGTAGAGGC CTCGTGAATG 2340 TCCTGCCAAT TGGGGAATCT GGACCCGATC AAGTTTCCCT AGGATTGTTG AGAATCTAGC 2400 TAGCGCTTGT ACCCTGGGTT GGTCATTGTC TCATTGGTGC TCTCCGGATT GGTTTGTTTT 2460 GGGGTGGAAA AAAAAACACT AGTCGATGTT GCCTGGTTTT TCATGCTGTT ACCTGGCGAG 2520 GAAATGACGA TTTCTTGT
2539Nucleotide Fasta Sequence
>OGLUM07G21150.1|Class-I|Oryza glumaepatula TCTTCCCCCGCTCCATTTCCGAATCGTCGTCTCGCCTCCACTTCCGACTTCCGAGTCGTCTCGCCTCGCCGGCGCAGGATGGCGGCGGCGACGACCGCCGCGGCGGCGGCGAGGGTGGGGCTGCTGTACGACGAGAGGATGTGCGCGCACGCGACGCCCGACGGGGAGGAGCACCCGGAGAACCCCGAGAGGCTGCGGGCCATCTGGCGCAAGCTCTCCGCCGACGGCGTCGCCTCCAGGTGCATGATCATGAAAGCGAAGGAAGCTGAGGACAAGTATATAGCTTCTGTCCATAGCCAGAACCATATCAAGCTGATGAGGAGTATCAGCTCAAAAGAATATGATTCCCGTCGAAACAAGATTGCTAGAAAATTTAATTCCATTTACTTCAACAAGGGCTCCTCAGAGTCTGCTTTTCTTGCAGCTGGTTCTGTGATTGAGGTAGCTGAGAAGGTTGCTGCAGGAGAGTTAAGTTCTGCTATTGCTCTAGTCCGACCTCCAGGTCACCATGCTGAGCATAATGAGGCAATGGGTTTTTGCCTCTTCAACAATGTAGCAATTGCTGCTGATTATCTCTTAAATGAGAGGACTGACTTAGGTATCAAGAAGATATTGATTGTAGATTGGGATGTTCATCATGGAAATGGCACACAAAAGATGTTTTATAGTGATCCTCGTGTATTGTTCTTTTCAGTTCACAGATTTGATTATGGCAGCTTCTATCCTGCTGAAGGGGATGCATCTTACTGTTTCATTGGGGAAGGAGATGGTAAAGGGTACAACATTAACGTGCCCTGGGAACATGGAAAATGTGGTGATGCAGATTATATTGCTGCATGGGACCATGTACTACTTCCTGTTGCTGAAGCATTTAACCCTGATATAGTCTTGGTGTCTGCTGGGTTTGATGCAGCACTGGGTGATCCTCTTGGTGGCTGCTGCATCACTCCCAATGGATATGCTCTGCTACTGACAAAGCTCTTAGGTTTTGCCCAAGGGAGGATAGTGATGGCTCTTGAAGGAGGCTATAACCTTAGATCCATAGCAAATTCAGTTAGTGCTTGTGCTAAAGTTTTGTTGGGAGACAAGTTCAGATTTGACACTCCTGATATGCAACCGTTTGAATCTTCATGGAGAGTTATACAAGCGGTACGTGATGAATTGAAGACGTTCTGGCCTGTTCTGAGTAATAGATTGCCAGAGAATATATCATTGAGGAGTAGGCCCTCACAAATTGAGCTGTATTCTTCTGGTTCTGACTCTGAAGTTGAAGATCTCCCTGATGCTATTGCTTCTGTCAATATTATTCAAATTACTGATGGTATTATAAGTGAAAGCCTCTCAAAGTTGAACCTTGATGAAGACAAAATCGCAACAAAGACCACCTCAAGTAATGTAATGGTTGAAGGTCCAACTGATTCAGTTGAACCACAAAATGATGGATCTGCTGCGGTGTCAACTGAAGGAATATCATCTCTATCTTCTACTTGGAGATCAGAACTGTCAAAAGTATATGTTTGGTATGCCAGCTTTGGTTCAAACATGTGGACACCAAGGTTTCTGTGCTACATCCAAGGGGGAAAGGCTGAGGGTATGAATATACCATGTTTTGGATCTCATGACACAAGCCCACCAAGAGGTTCCATGTGGAAGACTGTGCCTCATAGATTGTTTTTTGGTAGATCCTCTACTCCTTGCTGGGGAACTGGTGGTGTTGCTTTTCTCAACCCTGAGATAAACCACACTGAGAACTCCTATGTCTGCATGTATAAAATAACGCTCGAGCAGTTCAATGATGTATTGTTTCAAGAGAATCGTTTAGTGAAGGAGAACGGCGAAAGTGGAAAAACTGAGTCTCCTGACTCTCCTTTGATTGGCTTGTCTGAAATAGAGTTTGTTTCCAGAAACAAGGGTGTCCACCTTGCACCTATTAAGGATAGCTGGTACTCCAATGTACTTTACCTTGGGGAGGAGGATAACCTTCCAATTCTTACAATGACATGCCCGTCATCAGACGTAGAGCGATGCAGATCCGGAGAGCTGCCATTGTGTCCTCCATCCAAGACCTACTCCGCCACCCTGATAAGGGGACTAATGGAAGGGAAGCACCTGGATGCAGATGCGGCCGCTAGTTACATCAACACTGCAGCTACCAGAGGCCTGTGAAGGCTGCTTCCCTATGCATTATGGTTTGTAGTTTTGCACTTACGCGCTTAGTTTGTACAGCCAGTAGGAGCGTACTAGGACTGTAGGAGGAATGATGAGTAGGTTTGCAGGACTGTAAAGATAGTGCGTTGTTCATTCAGGACCACGGGGGCTTATGTAGAGGCCTCGTGAATGTCCTGCCAATTGGGGAATCTGGACCCGATCAAGTTTCCCTAGGATTGTTGAGAATCTAGCTAGCGCTTGTACCCTGGGTTGGTCATTGTCTCATTGGTGCTCTCCGGATTGGTTTGTTTTGGGGTGGAAAAAAAAACACTAGTCGATGTTGCCTGGTTTTTCATGCTGTTACCTGGCGAGGAAATGACGATTTCTTGT
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |