WERAM Information

Tag Content
WERAM ID WERAM-Mae-0089
Ensembl Protein ID ENSMEUP00000008883.1
Gene Name HDAC4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMEUG00000009720.1 ENSMEUT00000009771.1 ENSMEUP00000008883.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.90e-113 378.5 61 936
HDAC Class-I 5.50e-28 98 657 937
Organism Macropus eugenii
Domain Profile
  HDAC Class-II
           class-2.txt  28 eRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekee 81 
                           + +q+ l +l++++ +++   +++ + ++e+l   H++++ e++++++++   +
  ENSMEUP00000008883.1  61 QQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLAMK 114
                           456666677788877888888888888899999999999988888887555444 PP
           class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 
                           +glvyd+ mlkhq++++n+++hpE+++Riq+i+srlqe+gl++k+e++++rkat+eelq+vHse+h  l++t+ +l++++l+s      
  ENSMEUP00000008883.1 639 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRSKCECIRGRKATLEELQTVHSEAHALLYGTN-PLNRQKLDSkkllgs 726
                           79***********************************************************************.*************** PP
           class-2.txt  85 ............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk 161
                                       ++vdsd+i++e++s+ aarlavG+v+elv+kv++gelk                   GFC+fn+va+aakllqq+l+
  ENSMEUP00000008883.1 727 ltsmfvrlpcggVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKXXXXXXXXXXXXXXXXXXXGFCYFNSVAIAAKLLQQRLN 815
                           ***************************************************************************************** PP
           class-2.txt 162 vkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlp 247
                           v+kilivDwDvHhGnGtq++fy+dp+vly+SlHRyd+g+ffp  gsga+devg+g+g+gfnvN+a++ggl   mgd+eyl+afr+vv+p
  ENSMEUP00000008883.1 816 VNKILIVDWDVHHGNGTQQAFYSDPNVLYISLHRYDDGNFFP--GSGAPDEVGTGPGVGFNVNMAFTGGLdppMGDTEYLTAFRTVVMP 902
                           ******************************************..********************************************* PP
           class-2.txt 248 iakeFkPdlvlvsaGfDaaeg..dplgglsvtak 279
                           +a+eF+Pd+vlvs+GfDa+eg  +plgg++++ak
  ENSMEUP00000008883.1 903 VANEFAPDVVLVSSGFDAVEGhpTPLGGYNLSAK 936
                           *********************99********987 PP
  HDAC Class-I
           class-1.txt  17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseey 64 
                           +++hp    r++ + + + + gl  k e ++ +ka+ eel+++hse++
  ENSMEUP00000008883.1 657 TNSHPEHAGRIQSIWSRLQETGLRSKCECIRGRKATLEELQTVHSEAH 704
                           57899999999999999***************************9875 PP
           class-1.txt 139 asGfcyvnDivlailellk..khkrvlyididlhhGDgveeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdg 224
                             Gfcy n + +a   l++  + +++l +d d+hhG+g ++afy    v+ +s+h+y++ +ffPg+G  ++vg++ g  + vn+ ++ g
  ENSMEUP00000008883.1 794 XXGFCYFNSVAIAAKLLQQrlNVNKILIVDWDVHHGNGTQQAFYSDPNVLYISLHRYDDgNFFPGSGAPDEVGTGPGVGFNVNMAFTGG 882
                           57**********987777645789*********************************9746************************9999 PP
           class-1.txt 225 id....DesyekifksviskvieafePeavvlqcGaDslagD..rlgefnlsikg 273
                           +d    D++y + f++v+ +v + f P++v++  G D++ g   +lg +nls k 
  ENSMEUP00000008883.1 883 LDppmgDTEYLTAFRTVVMPVANEFAPDVVLVSSGFDAVEGHptPLGGYNLSAKX 937
                           8766669********************************99633699***99875 PP
Protein Sequence
(Fasta)		GLSGRDQPVE LLNPPRVNHM PSTVDVSPAL PLQVAPPAVP MDLRLDHQFS LPVTEPTLRE 60
QQLQQELLAL KQKQQIQRQI LIAEFQRQHE QLSRQHEAQL HEHIKQQQEM LAMKHQHELL 120
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXAVAS TEVKMKLQEF VLNKKKALAH 180
RNLNHCISSD PRYWYGKTQH SSLDQSSPPQ SGGPAAYNHP VLGMYDSKDD FPLRKTSEPN 240
LKLRSRLKQK VAERRSSPLL RRKDGPVVTA LKKRPLDVTD SACSSAPGSG PSSPNNSSSS 300
ISAENGLASS AAGLQAEXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 360
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXQHMVL LEQPSAQTPL 420
VTXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 480
XXXXXXXXXX XXXXXXXMLP KPAEPARQHE SHPEETEEEL REHQALLEEP YPERLASHKE 540
PVQVKQEPAE SDGEEAEAAH ETEPGQRQAE QELLFRQQAL LLEQQRIHQL RNYQASMEAA 600
GIPVSFGGHR PLSRAQSSPA SATFPMSVQE PPAKPRFTTG LVYDTLMLKH QCTCGNTNSH 660
PEHAGRIQSI WSRLQETGLR SKCECIRGRK ATLEELQTVH SEAHALLYGT NPLNRQKLDS 720
KKLLGSLTSM FVRLPCGGVG VDSDTIWNEV HSSGAARLAV GCVVELVFKV ATGELKXXXX 780
XXXXXXXXXX XXXXXGFCYF NSVAIAAKLL QQRLNVNKIL IVDWDVHHGN GTQQAFYSDP 840
NVLYISLHRY DDGNFFPGSG APDEVGTGPG VGFNVNMAFT GGLDPPMGDT EYLTAFRTVV 900
MPVANEFAPD VVLVSSGFDA VEGHPTPLGG YNLSAKXXXX XXXXXXXXXX XXXXXXXXXX 960
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX KYWRSLQRFS 1020
STVGYSLLEA QKCENEEAET VTALASLSVG VKHAEKRSDD EPMEEEPPL 1069
Nucleotide Sequence
(Fasta)		GGACTTTCTG GCCGAGACCA GCCAGTCGAA CTGCTGAACC CACCGAGAGT GAACCACATG 60
CCTAGTACAG TGGACGTGAG CCCAGCACTG CCCCTCCAAG TGGCTCCCCC AGCCGTGCCC 120
ATGGACCTCC GCCTGGACCA CCAGTTCTCG CTGCCGGTGA CGGAACCCAC ACTGCGCGAG 180
CAGCAGCTTC AGCAGGAGCT GCTGGCCCTG AAGCAGAAGC AGCAGATTCA GCGGCAGATT 240
CTTATCGCTG AGTTCCAGCG CCAGCACGAG CAGCTCTCAC GCCAGCATGA GGCCCAGCTC 300
CATGAGCACA TCAAGCAGCA GCAGGAGATG CTGGCGATGA AGCACCAGCA CGAGCTGCTG 360
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 420
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNGTGC TGTGGCCAGC 480
ACGGAAGTGA AGATGAAACT CCAGGAGTTT GTCCTGAATA AGAAGAAGGC ACTGGCCCAT 540
CGGAATCTGA ATCACTGCAT CTCTAGTGAC CCCCGCTACT GGTATGGGAA AACTCAGCAC 600
AGCAGCTTGG ACCAGAGCTC ACCCCCACAA AGTGGGGGCC CTGCAGCCTA CAATCACCCC 660
GTGCTGGGAA TGTATGACTC CAAAGACGAC TTTCCTCTTA GAAAAACATC TGAACCCAAT 720
CTGAAATTAC GATCCAGGCT AAAGCAGAAG GTGGCTGAGA GACGGAGCAG CCCCCTCTTG 780
CGCAGGAAGG ATGGCCCAGT GGTGACTGCT CTTAAAAAGC GTCCATTGGA TGTCACAGAC 840
TCTGCATGCA GCAGTGCCCC TGGATCAGGC CCCAGTTCCC CCAACAATAG CTCCAGCAGC 900
ATCAGCGCCG AGAACGGACT CGCCAGCTCT GCCGCCGGCC TCCAGGCAGA GNNNNNNNNN 960
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1020
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1080
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1140
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1200
NNNNNNNNNN NNNNNCAGCA CATGGTGCTC CTGGAGCAGC CCTCGGCCCA GACGCCCTTA 1260
GTCACAGNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1320
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1380
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1440
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NATGCTCCCA 1500
AAGCCCGCTG AGCCAGCCCG CCAGCATGAG AGCCACCCCG AGGAGACGGA AGAGGAGCTG 1560
CGCGAGCACC AGGCACTGCT GGAGGAGCCG TACCCTGAAC GTCTGGCCAG CCATAAGGAG 1620
CCGGTGCAGG TCAAGCAGGA GCCCGCAGAG AGTGATGGGG AGGAGGCTGA GGCAGCCCAC 1680
GAGACCGAAC CCGGGCAGCG ACAGGCTGAG CAGGAGCTGC TCTTCCGCCA GCAAGCCCTT 1740
CTGCTCGAAC AGCAGCGCAT CCATCAGCTG AGAAACTACC AGGCCTCTAT GGAGGCCGCG 1800
GGCATCCCCG TCTCCTTCGG TGGCCACCGA CCCCTGTCCC GTGCGCAGTC ATCACCCGCA 1860
TCGGCTACAT TCCCCATGTC TGTTCAGGAG CCCCCTGCCA AGCCGAGGTT CACAACAGGC 1920
CTTGTGTATG ACACCTTGAT GCTGAAGCAT CAGTGCACCT GTGGAAACAC TAACAGTCAC 1980
CCAGAGCACG CTGGCCGCAT TCAGAGCATC TGGTCCCGGC TGCAAGAAAC AGGCCTGCGC 2040
AGCAAGTGTG AGTGCATTCG GGGACGGAAG GCTACGCTGG AAGAACTGCA GACAGTGCAC 2100
TCAGAGGCCC ATGCCCTGCT CTACGGCACC AACCCCCTAA ACAGACAGAA ATTGGACAGT 2160
AAGAAACTTC TAGGTTCCTT AACATCCATG TTCGTCAGGC TTCCCTGTGG GGGCGTTGGG 2220
GTGGATAGTG ACACCATCTG GAATGAAGTG CATTCCTCTG GAGCCGCCCG CCTGGCCGTG 2280
GGCTGCGTGG TGGAGCTAGT CTTCAAGGTG GCCACTGGAG AGCTGAAGNN NNNNNNNNNN 2340
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNGGGGTT TTGCTATTTC 2400
AATTCTGTGG CAATCGCGGC CAAGCTGCTC CAGCAAAGGC TGAATGTGAA CAAGATCCTC 2460
ATCGTGGACT GGGATGTACA TCACGGCAAT GGGACCCAGC AGGCCTTCTA CAGTGACCCC 2520
AACGTGCTGT ACATCTCCCT GCATCGCTAC GATGATGGCA ATTTCTTTCC TGGCAGCGGA 2580
GCCCCTGATG AGGTTGGCAC GGGACCTGGC GTCGGCTTCA ATGTGAACAT GGCATTCACT 2640
GGTGGCTTGG ACCCACCCAT GGGAGATACA GAATATCTAA CTGCCTTCAG AACGGTCGTC 2700
ATGCCAGTGG CTAACGAATT TGCCCCCGAC GTTGTGCTGG TTTCATCTGG TTTCGATGCT 2760
GTGGAGGGGC ACCCCACGCC TCTTGGAGGC TATAACCTGT CAGCAAAGTN NNNNNNNNNN 2820
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2880
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2940
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3000
NNNNNNNNNN NNNNNNNNNN NNNNNNNNGC AAATACTGGC GTTCTCTGCA GCGCTTTTCC 3060
TCCACTGTGG GCTACTCCCT CCTCGAGGCT CAGAAATGTG AGAACGAAGA GGCAGAGACT 3120
GTCACCGCCC TGGCCTCACT GTCTGTGGGG GTCAAACACG CTGAGAAGAG GTCAGATGAT 3180
GAGCCCATGG AAGAGGAGCC CCCCCTGTAG 3211
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 89 0.0 780
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 88 0.0 779
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 89 0.0 779
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 89 0.0 778
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 88 0.0 776
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 88 0.0 770
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 87 0.0 770
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 88 0.0 770
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 87 0.0 768
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 87 0.0 764
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 86 0.0 761
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 86 0.0 759
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 86 0.0 759
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 86 0.0 758
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 85 0.0 756
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 86 0.0 754
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 86 0.0 752
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 85 0.0 752
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 86 0.0 752
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 86 0.0 751
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 87 0.0 751
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 87 0.0 747
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 84 0.0 746
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 85 0.0 743
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 86 0.0 729
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 86 0.0 729
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 84 0.0 728
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 85 0.0 726
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 81 0.0 706
WERAM-Dan-0037 ENSDNOP00000003826.3 Dasypus novemcinctus 82 0.0 695
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 80 0.0 693
WERAM-Poa-0116 ENSPPYP00000014905.2 Pongo abelii 80 0.0 665
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 78 0.0 660
WERAM-Dio-0038 ENSDORP00000004330.1 Dipodomys ordii 81 0.0 657
WERAM-Mam-0041 ENSMMUP00000007984.2 Macaca mulatta 76 0.0 652
WERAM-Leo-0082 ENSLOCP00000011105.1 Lepisosteus oculatus 83 0.0 652
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 83 0.0 636
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 74 2e-179 627
WERAM-Tar-0171 ENSTRUP00000035900.1 Takifugu rubripes 78 7e-179 625
WERAM-Orn-0049 ENSONIP00000005635.1 Oreochromis niloticus 81 1e-178 624
WERAM-Ten-0099 ENSTNIP00000000138.1 Tetraodon nigroviridis 79 1e-178 624
WERAM-Xim-0022 ENSXMAP00000002092.1 Xiphophorus maculatus 76 2e-178 624
WERAM-Pof-0029 ENSPFOP00000001978.1 Poecilia formosa 76 2e-177 620
WERAM-Gaa-0020 ENSGACP00000002894.1 Gasterosteus aculeatus 77 3e-177 620
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 75 3e-161 566
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 66 3e-154 543
WERAM-Tas-0071 ENSTSYP00000007103.1 Tarsius syrichta 79 5e-153 539
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 71 5e-150 529
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 68 3e-147 520
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 64 2e-142 504
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 69 8e-142 502
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 68 4e-141 499
WERAM-Sah-0166 ENSSHAP00000017733.1 Sarcophilus harrisii 64 5e-141 499
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 68 6e-141 499
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 67 6e-140 496
WERAM-Eqc-0174 ENSECAP00000019543.1 Equus caballus 69 8e-140 495
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 62 2e-139 494
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 62 4e-138 489
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 65 1e-130 464
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 57 4e-123 440
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 59 5e-113 406
WERAM-Ect-0068 ENSETEP00000007698.1 Echinops telfairi 51 1e-111 402
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 53 8e-109 392
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 50 2e-95 348
WERAM-Tub-0129 ENSTBEP00000014362.1 Tupaia belangeri 54 4e-87 320
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 43 4e-84 310
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 54 6e-55 213
WERAM-Sem-0010 EFJ19764 Selaginella moellendorffii 40 1e-54 212
WERAM-Brr-0181 Bra035942.1-P Brassica rapa 40 5e-54 211
WERAM-Bro-0168 Bo9g014470.1 Brassica oleracea 41 8e-54 210
WERAM-Thc-0031 EOY22062 Theobroma cacao 40 2e-53 208
WERAM-Sol-0055 Solyc03g115150.2.1 Solanum lycopersicum 39 3e-52 204
WERAM-Arl-0149 scaffold_802745.1 Arabidopsis lyrata 40 3e-51 201
WERAM-Art-0147 AT5G61070.1 Arabidopsis thaliana 39 3e-51 201
WERAM-Viv-0107 VIT_17s0000g07280.t01 Vitis vinifera 37 4e-51 201
WERAM-Mua-0066 GSMUA_Achr4P03250_001 Musa acuminata 38 5e-51 201
WERAM-Usm-0012 UM02102P0 Ustilago maydis 39 8e-51 200
Created Date 25-Jun-2016