Tag |
Content |
WERAM ID |
WERAM-Cap-0164 |
Ensembl Protein ID |
ENSCPOP00000013386.2 |
Gene Name |
HDAC10 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
2.60e-134 |
447.5 |
3 |
589 |
HDAC |
Class-I |
3.50e-29 |
102.3 |
27 |
316 |
|
Organism |
Cavia porcellus |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeelesltvdsd 90 ++lvy+e m++++ l++n+e+++E+peR+ a l lq+ gl ++++ ++ar+a++ el lvHs e+v l++++++l +eel++l+ ++d ENSCPOP00000013386.2 3 TALVYHEDMMATRLLWDNSECKIECPERLAAALGGLQQCGLEQRCLYIAAREASEAELGLVHSPEYVALVRRTQTLGTEELQALSGQYD 91 689************************************************************************************** PP class-2.txt 91 siylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtq 179 ++y++++++++arla+Ga+l+lvd+vl+g ++ng+a+vRPPGHH+++++a+GFC+fnnva+aa+++++++ +++ilivDwD+HhG+G+q ENSCPOP00000013386.2 92 AVYFHPSTFHCARLAAGAALQLVDAVLTGAAHNGLALVRPPGHHSQRAAANGFCVFNNVAIAAEHAKRTHGLHRILIVDWDIHHGQGIQ 180 ***************************************************************************************** PP class-2.txt 180 eifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaeg 268 if++dp+vly+S+HRy++g+f+p + ++++d+vg+ +g gf+vN++wn+ +mg+a+ylaaf +v+lp+a eF+P+lvl+saGfD+a g ENSCPOP00000013386.2 181 YIFEDDPSVLYFSWHRYEHGRFWPFLPESDADTVGQRQGRGFTVNLPWNQVGMGNADYLAAFLHVLLPVAFEFDPELVLISAGFDSAIG 269 ***************************************************************************************** PP class-2.txt 269 dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 dp+g+++ t++c+a+lt+ l+ laggrv++vlEGGy+l+++a++v ++v+aLlg ENSCPOP00000013386.2 270 DPEGQMQATPECFAHLTRLLQVLAGGRVCAVLEGGYHLESLAQSVCMTVRALLG 323 ****************************************************96 PP class-2.txt 221 fnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdpl 271 +nv ++++g++ +l + +vlp+a+ F+Pd+v+v+ G +dp ENSCPOP00000013386.2 542 YNVCMPLPGTT---GGFLSCILGLVLPMAYGFQPDVVIVALGLHHGLQDPQ 589 56666666655...678999999*****************99866555554 PP
HDAC Class-I
class-1.txt 23 kpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasle 111 p+rl+ + + + gl+++ + +++as +el +hs ey+ ++++ ++ +eel+ + +++ + P f+ ++l +Ga+l+ ENSCPOP00000013386.2 27 CPERLAAALGGLQQCGLEQRCLYIAAREASEAELGLVHSPEYVALVRRTQTLGTEELQALSGQYDAVYFHP---STFHCARLAAGAALQ 112 566666666667888999999999***********************999988888877777775544333...67888999******* PP class-1.txt 112 aakkLnkkeadiainw.aGGlhhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDgveeafyttdrvmtvsfhkygee. 196 ++ + ++ a+ ++ hh+++ a Gfc n++ +a + +++h +r+l +d d+hhG g++ f+ v+ s h+y+++ ENSCPOP00000013386.2 113 LVDAVLTGAAHNGLALvRPPGHHSQRAAANGFCVFNNVAIAAEHAKRTHglHRILIVDWDIHHGQGIQYIFEDDPSVLYFSWHRYEHGr 201 *999988776655544133459**********************99976448*********************************9864 PP class-1.txt 197 ffP..gtGdlsdvgaekgkyyavnvPlkd.gidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvk 282 f+P d + vg+ +g+ ++vn+P ++ g+ + y + f +v+ +v f+Pe v++ G Ds gD+ g+ + + + +a+ ++++ ENSCPOP00000013386.2 202 FWPflPESDADTVGQRQGRGFTVNLPWNQvGMGNADYLAAFLHVLLPVAFEFDPELVLISAGFDSAIGDPEGQMQATPECFAHLTRLLQ 290 666334678999**************97659*****************************************************99999 PP class-1.txt 283 sf.nlpllvlGGGGYtlrnvaRcwty 307 + + GGY l+ +a+ ++ ENSCPOP00000013386.2 291 VLaGGRVCAVLEGGYHLESLAQSVCM 316 99666777788899999999887665 PP
|
Protein Sequence (Fasta) | MGTALVYHED MMATRLLWDN SECKIECPER LAAALGGLQQ CGLEQRCLYI AAREASEAEL 60 GLVHSPEYVA LVRRTQTLGT EELQALSGQY DAVYFHPSTF HCARLAAGAA LQLVDAVLTG 120 AAHNGLALVR PPGHHSQRAA ANGFCVFNNV AIAAEHAKRT HGLHRILIVD WDIHHGQGIQ 180 YIFEDDPSVL YFSWHRYEHG RFWPFLPESD ADTVGQRQGR GFTVNLPWNQ VGMGNADYLA 240 AFLHVLLPVA FEFDPELVLI SAGFDSAIGD PEGQMQATPE CFAHLTRLLQ VLAGGRVCAV 300 LEGGYHLESL AQSVCMTVRA LLGDPTPKLL GPMTPCQSAL ESIQNVRKAQ APHWKSLQQQ 360 DVSPVLSPST HFPEGRPLVL LPGDPVCKAE AEVTSPRPHL DQQHLHPTTP MRMAVVLTAP 420 HPRALPADML HQEESAPKCE AEDWARSHES LAQDEALTAL RKLLYLLNGI LDGQVSGGVA 480 ATLAPAVAAT LDIAIRQSLS LGAQRVLCVV LGQLDRPLDL ADDGRILWLN IRGKEAVILS 540 MYNVCMPLPG TTGGFLSCIL GLVLPMAYGF QPDVVIVALG LHHGLQDPQA ALLAAMLRGP 600 AGGRVLALLE ESAPQLAEAL AQGLYGEAPP NLGPFSPASP EDLKTLMSLR AQLQLRWEMM 660 RVERRGGT 668Protein Fasta Sequence
>ENSCPOP00000013386.2|Class-I|Cavia porcellus MGTALVYHEDMMATRLLWDNSECKIECPERLAAALGGLQQCGLEQRCLYIAAREASEAELGLVHSPEYVALVRRTQTLGTEELQALSGQYDAVYFHPSTFHCARLAAGAALQLVDAVLTGAAHNGLALVRPPGHHSQRAAANGFCVFNNVAIAAEHAKRTHGLHRILIVDWDIHHGQGIQYIFEDDPSVLYFSWHRYEHGRFWPFLPESDADTVGQRQGRGFTVNLPWNQVGMGNADYLAAFLHVLLPVAFEFDPELVLISAGFDSAIGDPEGQMQATPECFAHLTRLLQVLAGGRVCAVLEGGYHLESLAQSVCMTVRALLGDPTPKLLGPMTPCQSALESIQNVRKAQAPHWKSLQQQDVSPVLSPSTHFPEGRPLVLLPGDPVCKAEAEVTSPRPHLDQQHLHPTTPMRMAVVLTAPHPRALPADMLHQEESAPKCEAEDWARSHESLAQDEALTALRKLLYLLNGILDGQVSGGVAATLAPAVAATLDIAIRQSLSLGAQRVLCVVLGQLDRPLDLADDGRILWLNIRGKEAVILSMYNVCMPLPGTTGGFLSCILGLVLPMAYGFQPDVVIVALGLHHGLQDPQAALLAAMLRGPAGGRVLALLEESAPQLAEALAQGLYGEAPPNLGPFSPASPEDLKTLMSLRAQLQLRWEMMRVERRGGT
|
Nucleotide Sequence (Fasta) | ATGGGGACTG CTCTTGTGTA TCATGAGGAC ATGATGGCCA CCCGGCTGCT CTGGGATAAC 60 TCAGAGTGCA AGATCGAGTG TCCTGAGCGC CTGGCTGCAG CCCTGGGCGG TCTCCAGCAG 120 TGCGGCCTGG AGCAGAGGTG CCTATACATA GCAGCCCGCG AGGCCTCGGA GGCAGAGCTG 180 GGCCTGGTGC ACAGCCCAGA GTACGTGGCC CTAGTGCGCA GGACCCAGAC TCTGGGAACA 240 GAGGAGCTCC AGGCACTTTC TGGACAGTAT GATGCTGTCT ACTTCCACCC GAGCACCTTT 300 CACTGTGCCC GGCTTGCTGC AGGTGCTGCA CTGCAGCTGG TAGATGCCGT GCTGACGGGA 360 GCTGCGCACA ATGGGCTTGC CCTGGTGAGG CCTCCTGGGC ACCACAGCCA GAGGGCAGCT 420 GCCAATGGGT TCTGTGTGTT CAACAATGTG GCTATAGCTG CTGAACATGC CAAGCGGACA 480 CATGGGCTGC ACAGGATCCT CATTGTTGAC TGGGATATCC ACCATGGCCA GGGCATCCAG 540 TACATCTTTG AGGATGACCC CAGTGTGCTT TACTTCTCCT GGCACCGCTA TGAGCACGGA 600 CGCTTCTGGC CCTTCTTGCC AGAGTCAGAC GCAGACACGG TTGGGCAGAG ACAGGGCCGC 660 GGCTTCACTG TCAATTTGCC CTGGAACCAG GTCGGGATGG GCAACGCTGA CTACCTGGCT 720 GCCTTCCTGC ACGTGCTGCT TCCAGTGGCC TTTGAGTTTG ACCCTGAGCT GGTGCTGATC 780 TCCGCAGGAT TTGACTCAGC TATTGGGGAT CCAGAGGGGC AGATGCAGGC CACACCAGAG 840 TGCTTTGCCC ACCTCACACG GTTGCTGCAG GTGCTAGCTG GTGGCCGTGT CTGTGCAGTG 900 CTGGAGGGCG GCTACCACCT AGAGTCCCTG GCACAGTCAG TGTGCATGAC TGTGCGGGCA 960 CTGCTGGGTG ACCCCACACC TAAGCTGTTG GGGCCCATGA CACCATGTCA GAGTGCCCTG 1020 GAGTCCATCC AAAATGTTCG GAAAGCCCAG GCCCCTCACT GGAAGAGCCT CCAGCAACAA 1080 GATGTGTCTC CTGTGCTGAG TCCCAGCACC CACTTCCCAG AGGGGAGGCC CCTGGTACTA 1140 CTGCCCGGGG ATCCTGTATG TAAGGCAGAA GCAGAGGTGA CTTCACCAAG GCCTCACCTG 1200 GACCAGCAGC ACCTCCACCC CACAACCCCC ATGCGAATGG CTGTTGTCCT GACTGCTCCA 1260 CATCCCCGGG CTCTACCCGC TGATATGCTT CATCAGGAGG AGTCAGCCCC AAAGTGTGAG 1320 GCAGAAGACT GGGCCAGGTC ACATGAGTCC CTGGCTCAGG ATGAGGCCCT CACTGCACTT 1380 AGGAAGCTCC TGTACCTCTT AAATGGGATT CTGGATGGGC AGGTAAGCGG TGGAGTTGCA 1440 GCCACCCTGG CACCTGCCGT AGCAGCCACC TTGGACATAG CCATTAGGCA AAGTCTATCT 1500 CTTGGAGCCC AGAGGGTTCT CTGTGTGGTG CTGGGACAGC TGGATCGGCC ACTGGACCTT 1560 GCTGATGATG GGAGAATTCT GTGGCTGAAC ATTCGGGGCA AGGAAGCAGT CATACTGTCC 1620 ATGTACAATG TCTGCATGCC ACTGCCAGGG ACGACAGGAG GGTTCCTGAG CTGCATCTTG 1680 GGCCTGGTGC TGCCCATGGC TTATGGCTTC CAGCCTGATG TGGTGATAGT GGCGTTGGGG 1740 CTTCACCATG GCCTTCAGGA CCCCCAGGCT GCTCTCCTGG CTGCAATGCT CCGGGGCCCG 1800 GCAGGTGGCC GAGTCCTGGC TCTCCTTGAG GAATCTGCAC CCCAACTTGC AGAAGCGTTG 1860 GCCCAGGGGC TCTATGGAGA GGCGCCCCCC AACTTGGGCC CTTTCTCCCC GGCCTCTCCG 1920 GAGGACCTTA AGACCCTGAT GAGCCTGCGA GCGCAGCTGC AGCTGCGGTG GGAGATGATG 1980 CGGGTGGAGA GGCGCGGTGG CACT
2005Nucleotide Fasta Sequence
>ENSCPOP00000013386.2|Class-I|Cavia porcellus ATGGGGACTGCTCTTGTGTATCATGAGGACATGATGGCCACCCGGCTGCTCTGGGATAACTCAGAGTGCAAGATCGAGTGTCCTGAGCGCCTGGCTGCAGCCCTGGGCGGTCTCCAGCAGTGCGGCCTGGAGCAGAGGTGCCTATACATAGCAGCCCGCGAGGCCTCGGAGGCAGAGCTGGGCCTGGTGCACAGCCCAGAGTACGTGGCCCTAGTGCGCAGGACCCAGACTCTGGGAACAGAGGAGCTCCAGGCACTTTCTGGACAGTATGATGCTGTCTACTTCCACCCGAGCACCTTTCACTGTGCCCGGCTTGCTGCAGGTGCTGCACTGCAGCTGGTAGATGCCGTGCTGACGGGAGCTGCGCACAATGGGCTTGCCCTGGTGAGGCCTCCTGGGCACCACAGCCAGAGGGCAGCTGCCAATGGGTTCTGTGTGTTCAACAATGTGGCTATAGCTGCTGAACATGCCAAGCGGACACATGGGCTGCACAGGATCCTCATTGTTGACTGGGATATCCACCATGGCCAGGGCATCCAGTACATCTTTGAGGATGACCCCAGTGTGCTTTACTTCTCCTGGCACCGCTATGAGCACGGACGCTTCTGGCCCTTCTTGCCAGAGTCAGACGCAGACACGGTTGGGCAGAGACAGGGCCGCGGCTTCACTGTCAATTTGCCCTGGAACCAGGTCGGGATGGGCAACGCTGACTACCTGGCTGCCTTCCTGCACGTGCTGCTTCCAGTGGCCTTTGAGTTTGACCCTGAGCTGGTGCTGATCTCCGCAGGATTTGACTCAGCTATTGGGGATCCAGAGGGGCAGATGCAGGCCACACCAGAGTGCTTTGCCCACCTCACACGGTTGCTGCAGGTGCTAGCTGGTGGCCGTGTCTGTGCAGTGCTGGAGGGCGGCTACCACCTAGAGTCCCTGGCACAGTCAGTGTGCATGACTGTGCGGGCACTGCTGGGTGACCCCACACCTAAGCTGTTGGGGCCCATGACACCATGTCAGAGTGCCCTGGAGTCCATCCAAAATGTTCGGAAAGCCCAGGCCCCTCACTGGAAGAGCCTCCAGCAACAAGATGTGTCTCCTGTGCTGAGTCCCAGCACCCACTTCCCAGAGGGGAGGCCCCTGGTACTACTGCCCGGGGATCCTGTATGTAAGGCAGAAGCAGAGGTGACTTCACCAAGGCCTCACCTGGACCAGCAGCACCTCCACCCCACAACCCCCATGCGAATGGCTGTTGTCCTGACTGCTCCACATCCCCGGGCTCTACCCGCTGATATGCTTCATCAGGAGGAGTCAGCCCCAAAGTGTGAGGCAGAAGACTGGGCCAGGTCACATGAGTCCCTGGCTCAGGATGAGGCCCTCACTGCACTTAGGAAGCTCCTGTACCTCTTAAATGGGATTCTGGATGGGCAGGTAAGCGGTGGAGTTGCAGCCACCCTGGCACCTGCCGTAGCAGCCACCTTGGACATAGCCATTAGGCAAAGTCTATCTCTTGGAGCCCAGAGGGTTCTCTGTGTGGTGCTGGGACAGCTGGATCGGCCACTGGACCTTGCTGATGATGGGAGAATTCTGTGGCTGAACATTCGGGGCAAGGAAGCAGTCATACTGTCCATGTACAATGTCTGCATGCCACTGCCAGGGACGACAGGAGGGTTCCTGAGCTGCATCTTGGGCCTGGTGCTGCCCATGGCTTATGGCTTCCAGCCTGATGTGGTGATAGTGGCGTTGGGGCTTCACCATGGCCTTCAGGACCCCCAGGCTGCTCTCCTGGCTGCAATGCTCCGGGGCCCGGCAGGTGGCCGAGTCCTGGCTCTCCTTGAGGAATCTGCACCCCAACTTGCAGAAGCGTTGGCCCAGGGGCTCTATGGAGAGGCGCCCCCCAACTTGGGCCCTTTCTCCCCGGCCTCTCCGGAGGACCTTAAGACCCTGATGAGCCTGCGAGCGCAGCTGCAGCTGCGGTGGGAGATGATGCGGGTGGAGAGGCGCGGTGGCACT
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |