Tag |
Content |
WERAM ID |
WERAM-Ori-0088 |
Ensembl Protein ID |
BGIOSGA026083-PA |
Gene Name |
OsI_26768 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
4.60e-125 |
418.1 |
13 |
335 |
HDAC |
Class-I |
4.10e-40 |
139.3 |
17 |
326 |
|
Organism |
Oryza indica |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletae.klekeelesltvdsdsiy 93 +gl+yde+m++h+++ +++ hpE+peR++ai+++l++ g++++++ +ka++a+++ +++vHs++h++l+++ + k +++ ++++ +++siy BGIOSGA026083-PA 13 VGLLYDERMCAHATPDGEE--HPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISsKEYDSRRNKIARKFNSIY 103 689************9999..***************************************************998888999999********* PP class-2.txt 94 lesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk...vkkilivDwDvHhGnGtqeify 183 +++ s+++a la+G+v+e+++kv++gel+ ++a+vRPPGHHae+++amGFClfnnva+aa +l+++ + +kkilivDwDvHhGnGtq++fy BGIOSGA026083-PA 104 FNKGSSESAFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTdlgIKKILIVDWDVHHGNGTQKMFY 196 ***************************************************************99877777********************** PP class-2.txt 184 kdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsv 276 +dp+vl++S+HR+d gsf+p+ g++++ +geg+g+g+n+Nv+w++g++gda+y+aa+++v+lp+a+ F+Pd+vlvsaGfDaa gdplgg+++ BGIOSGA026083-PA 197 SDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEHGKCGDADYIAAWDHVLLPVAETFNPDIVLVSAGFDAALGDPLGGCCI 289 ********************************************************************************************* PP class-2.txt 277 takcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 t+++ya l +ll++a+gr+v++lEGGynl++ia++v+a++k+Llg BGIOSGA026083-PA 290 TPNGYALLLTKLLGFAQGRIVMALEGGYNLRSIANSVSACAKVLLG 335 ********************************************96 PP
HDAC Class-I
class-1.txt 7 ydedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeels.kelkkfnvgedcPvfd 96 yde++ + + g++hp p+rl+ + + + g+ + i+k+k+a+ ++++++hs+++i++++++++++ ++ k +kfn + BGIOSGA026083-PA 17 YDERMCAHATpdGEEHPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISSKEYDSRRnKIARKFNSI---YFNK 106 555555444344899***********9999999***********************************999887662556778743...4557 PP class-1.txt 97 glfeycqlitGasleaakkLnkkeadiainwa.GGlhhakkseasGfcyvnDivlailellkk.....hkrvlyididlhhGDgveeafyttd 183 g e + l +G+ +e a+k+ +e ai hha ++ea Gfc n++ +a ll + k++l +d d+hhG+g ++ fy BGIOSGA026083-PA 107 GSSESAFLAAGSVIEVAEKVAAGELSSAIALVrPPGHHAEHNEAMGFCLFNNVAIAADYLLNErtdlgIKKILIVDWDVHHGNGTQKMFYSDP 199 888999999*************99888887641456********************99998742233369*********************** PP class-1.txt 184 rvmtvsfhkyge.effPgtGdlsd..vgaekgkyyavnvPlkdg.idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsik 272 rv+ s+h+++ +f+P+ Gd s +g+++gk y +nvP ++g + D y + +v+ +v e+f+P++v++ G D+ gD+lg ++ + BGIOSGA026083-PA 200 RVLFFSVHRFDYgSFYPAEGDASYcfIGEGDGKGYNINVPWEHGkCGDADYIAAWDHVLLPVAETFNPDIVLVSAGFDAALGDPLGGCCITPN 292 *********98525*******986447999*************9899********************************************** PP class-1.txt 273 ghaecvkfvksf.nlpllvlGGGGYtlrnvaRcw 305 g+a + + f + +++ GGY+lr +a BGIOSGA026083-PA 293 GYALLLTKLLGFaQGRIVMALEGGYNLRSIANSV 326 ****999999996778888889******999765 PP
|
Protein Sequence (Fasta) | MAAATTAAAA ARVGLLYDER MCAHATPDGE EHPENPERLR AIWRKLSADG VASRCMIMKA 60 KEAEDKYIAS VHSQNHIKLM RSISSKEYDS RRNKIARKFN SIYFNKGSSE SAFLAAGSVI 120 EVAEKVAAGE LSSAIALVRP PGHHAEHNEA MGFCLFNNVA IAADYLLNER TDLGIKKILI 180 VDWDVHHGNG TQKMFYSDPR VLFFSVHRFD YGSFYPAEGD ASYCFIGEGD GKGYNINVPW 240 EHGKCGDADY IAAWDHVLLP VAETFNPDIV LVSAGFDAAL GDPLGGCCIT PNGYALLLTK 300 LLGFAQGRIV MALEGGYNLR SIANSVSACA KVLLGDKFRF DTPDMQPFES SWRVIQAVRD 360 ELKTFWPILS NRLPENISLR SRPSQIELYS SGSDSEVEDL PDAIASVNII QITDGIISES 420 LSKLNLDEDK IATKTTSSNV MVEGPTDSVE PQNDGSAAVS TEGISSLSST WRSELSKVYV 480 WYASFGSNMW TPRFLCYIQG GKAEGMNIPC FGSHDTSPPR GSMWKTVPHR LFFGRSSTPC 540 WGTGGVAFLN PEINHTENSY VCMYKITLEQ FNDVLFQENR LVKENGESGK TESPDSPLIG 600 LSEIEFVSRN KGVHLAPIKD SWYSNVLYLG EEDNLPILTM TCPSSDVERC RSGELPLCPP 660 SKTYSATLIR GLMEGKHLDA DAAASYINTA ATRGL 695Protein Fasta Sequence
>BGIOSGA026083-PA|Class-I|Oryza indica MAAATTAAAAARVGLLYDERMCAHATPDGEEHPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISSKEYDSRRNKIARKFNSIYFNKGSSESAFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTDLGIKKILIVDWDVHHGNGTQKMFYSDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEHGKCGDADYIAAWDHVLLPVAETFNPDIVLVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAQGRIVMALEGGYNLRSIANSVSACAKVLLGDKFRFDTPDMQPFESSWRVIQAVRDELKTFWPILSNRLPENISLRSRPSQIELYSSGSDSEVEDLPDAIASVNIIQITDGIISESLSKLNLDEDKIATKTTSSNVMVEGPTDSVEPQNDGSAAVSTEGISSLSSTWRSELSKVYVWYASFGSNMWTPRFLCYIQGGKAEGMNIPCFGSHDTSPPRGSMWKTVPHRLFFGRSSTPCWGTGGVAFLNPEINHTENSYVCMYKITLEQFNDVLFQENRLVKENGESGKTESPDSPLIGLSEIEFVSRNKGVHLAPIKDSWYSNVLYLGEEDNLPILTMTCPSSDVERCRSGELPLCPPSKTYSATLIRGLMEGKHLDADAAASYINTAATRGL
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Nucleotide Sequence (Fasta) | ATGGCGGCGG CGACGACCGC CGCGGCGGCG GCGAGGGTGG GGCTGCTGTA CGACGAGAGG 60 ATGTGCGCGC ACGCGACGCC CGACGGGGAG GAGCACCCGG AGAACCCCGA GAGGCTGCGG 120 GCCATCTGGC GCAAGCTCTC CGCCGACGGC GTCGCCTCCA GGTGCATGAT CATGAAAGCG 180 AAGGAAGCTG AGGACAAGTA TATAGCTTCT GTCCATAGCC AGAACCATAT CAAGCTGATG 240 AGGAGTATCA GCTCAAAAGA ATATGATTCC CGTCGAAACA AGATTGCTAG AAAATTTAAT 300 TCCATTTACT TCAACAAGGG CTCCTCAGAG TCTGCTTTTC TTGCAGCTGG TTCTGTGATT 360 GAGGTAGCTG AGAAGGTTGC TGCAGGAGAG TTAAGTTCTG CTATTGCTCT AGTCCGACCT 420 CCAGGTCACC ATGCGGAACA TAATGAGGCA ATGGGTTTTT GCCTCTTCAA CAATGTAGCA 480 ATTGCTGCTG ATTATCTCTT AAATGAGAGG ACTGACTTAG GTATCAAGAA GATATTGATT 540 GTCGATTGGG ATGTTCATCA TGGAAATGGC ACACAAAAGA TGTTTTATAG TGATCCTCGT 600 GTATTGTTCT TTTCAGTTCA CAGATTTGAT TATGGCAGCT TCTATCCTGC TGAAGGGGAT 660 GCATCTTACT GTTTCATTGG GGAAGGAGAT GGTAAAGGGT ACAACATTAA TGTGCCCTGG 720 GAACATGGAA AATGTGGTGA TGCAGATTAT ATTGCTGCAT GGGACCATGT ACTACTTCCT 780 GTTGCTGAAA CATTTAACCC TGATATAGTC TTGGTGTCTG CTGGGTTTGA TGCAGCACTG 840 GGTGATCCTC TTGGTGGCTG CTGCATCACT CCCAATGGAT ATGCTCTGCT ACTGACAAAG 900 CTCTTAGGTT TTGCCCAAGG GAGGATAGTG ATGGCTCTTG AAGGAGGCTA TAACCTTAGA 960 TCCATAGCAA ATTCAGTTAG TGCTTGTGCT AAAGTTTTGT TGGGAGACAA GTTCAGATTT 1020 GACACTCCTG ATATGCAACC GTTTGAATCT TCATGGAGAG TTATACAAGC GGTACGTGAT 1080 GAATTGAAGA CGTTCTGGCC TATTCTGAGT AATAGATTGC CAGAGAATAT ATCATTGAGG 1140 AGTAGGCCCT CACAAATTGA GCTGTATTCT TCTGGTTCTG ACTCTGAAGT TGAAGATCTC 1200 CCTGATGCTA TTGCTTCTGT CAATATTATT CAAATTACTG ATGGTATTAT AAGTGAAAGC 1260 CTCTCAAAGT TGAACCTTGA TGAAGACAAA ATCGCAACAA AGACCACCTC AAGTAATGTA 1320 ATGGTTGAAG GTCCAACTGA TTCAGTTGAA CCACAAAATG ATGGATCTGC TGCGGTGTCA 1380 ACTGAAGGAA TATCATCTCT ATCTTCTACT TGGAGATCAG AACTGTCAAA AGTATATGTT 1440 TGGTATGCCA GCTTTGGTTC AAACATGTGG ACACCAAGGT TTCTGTGCTA CATCCAAGGG 1500 GGAAAGGCTG AGGGTATGAA TATACCATGT TTTGGATCTC ATGACACAAG CCCACCAAGA 1560 GGTTCCATGT GGAAGACTGT GCCTCATAGA TTGTTTTTTG GTAGATCCTC TACTCCTTGC 1620 TGGGGAACTG GTGGTGTTGC TTTTCTCAAC CCTGAGATAA ACCACACTGA GAACTCCTAT 1680 GTCTGCATGT ATAAAATAAC GCTCGAGCAG TTCAATGATG TATTGTTTCA AGAGAATCGT 1740 TTAGTGAAGG AGAACGGCGA AAGTGGAAAA ACTGAGTCTC CTGACTCTCC TTTGATTGGC 1800 TTGTCTGAAA TAGAGTTTGT TTCCAGAAAC AAGGGTGTCC ACCTTGCACC TATTAAGGAT 1860 AGCTGGTACT CCAATGTACT TTACCTTGGG GAGGAGGATA ACCTTCCAAT TCTTACAATG 1920 ACATGCCCGT CATCAGACGT AGAGCGATGC AGATCCGGAG AGCTGCCATT GTGTCCTCCA 1980 TCCAAGACCT ACTCCGCCAC CCTGATAAGG GGACTAATGG AAGGGAAGCA CCTGGATGCA 2040 GATGCGGCCG CTAGTTACAT CAACACTGCA GCTACCAGAG GCCTGTGA
2089Nucleotide Fasta Sequence
>BGIOSGA026083-PA|Class-I|Oryza indica ATGGCGGCGGCGACGACCGCCGCGGCGGCGGCGAGGGTGGGGCTGCTGTACGACGAGAGGATGTGCGCGCACGCGACGCCCGACGGGGAGGAGCACCCGGAGAACCCCGAGAGGCTGCGGGCCATCTGGCGCAAGCTCTCCGCCGACGGCGTCGCCTCCAGGTGCATGATCATGAAAGCGAAGGAAGCTGAGGACAAGTATATAGCTTCTGTCCATAGCCAGAACCATATCAAGCTGATGAGGAGTATCAGCTCAAAAGAATATGATTCCCGTCGAAACAAGATTGCTAGAAAATTTAATTCCATTTACTTCAACAAGGGCTCCTCAGAGTCTGCTTTTCTTGCAGCTGGTTCTGTGATTGAGGTAGCTGAGAAGGTTGCTGCAGGAGAGTTAAGTTCTGCTATTGCTCTAGTCCGACCTCCAGGTCACCATGCGGAACATAATGAGGCAATGGGTTTTTGCCTCTTCAACAATGTAGCAATTGCTGCTGATTATCTCTTAAATGAGAGGACTGACTTAGGTATCAAGAAGATATTGATTGTCGATTGGGATGTTCATCATGGAAATGGCACACAAAAGATGTTTTATAGTGATCCTCGTGTATTGTTCTTTTCAGTTCACAGATTTGATTATGGCAGCTTCTATCCTGCTGAAGGGGATGCATCTTACTGTTTCATTGGGGAAGGAGATGGTAAAGGGTACAACATTAATGTGCCCTGGGAACATGGAAAATGTGGTGATGCAGATTATATTGCTGCATGGGACCATGTACTACTTCCTGTTGCTGAAACATTTAACCCTGATATAGTCTTGGTGTCTGCTGGGTTTGATGCAGCACTGGGTGATCCTCTTGGTGGCTGCTGCATCACTCCCAATGGATATGCTCTGCTACTGACAAAGCTCTTAGGTTTTGCCCAAGGGAGGATAGTGATGGCTCTTGAAGGAGGCTATAACCTTAGATCCATAGCAAATTCAGTTAGTGCTTGTGCTAAAGTTTTGTTGGGAGACAAGTTCAGATTTGACACTCCTGATATGCAACCGTTTGAATCTTCATGGAGAGTTATACAAGCGGTACGTGATGAATTGAAGACGTTCTGGCCTATTCTGAGTAATAGATTGCCAGAGAATATATCATTGAGGAGTAGGCCCTCACAAATTGAGCTGTATTCTTCTGGTTCTGACTCTGAAGTTGAAGATCTCCCTGATGCTATTGCTTCTGTCAATATTATTCAAATTACTGATGGTATTATAAGTGAAAGCCTCTCAAAGTTGAACCTTGATGAAGACAAAATCGCAACAAAGACCACCTCAAGTAATGTAATGGTTGAAGGTCCAACTGATTCAGTTGAACCACAAAATGATGGATCTGCTGCGGTGTCAACTGAAGGAATATCATCTCTATCTTCTACTTGGAGATCAGAACTGTCAAAAGTATATGTTTGGTATGCCAGCTTTGGTTCAAACATGTGGACACCAAGGTTTCTGTGCTACATCCAAGGGGGAAAGGCTGAGGGTATGAATATACCATGTTTTGGATCTCATGACACAAGCCCACCAAGAGGTTCCATGTGGAAGACTGTGCCTCATAGATTGTTTTTTGGTAGATCCTCTACTCCTTGCTGGGGAACTGGTGGTGTTGCTTTTCTCAACCCTGAGATAAACCACACTGAGAACTCCTATGTCTGCATGTATAAAATAACGCTCGAGCAGTTCAATGATGTATTGTTTCAAGAGAATCGTTTAGTGAAGGAGAACGGCGAAAGTGGAAAAACTGAGTCTCCTGACTCTCCTTTGATTGGCTTGTCTGAAATAGAGTTTGTTTCCAGAAACAAGGGTGTCCACCTTGCACCTATTAAGGATAGCTGGTACTCCAATGTACTTTACCTTGGGGAGGAGGATAACCTTCCAATTCTTACAATGACATGCCCGTCATCAGACGTAGAGCGATGCAGATCCGGAGAGCTGCCATTGTGTCCTCCATCCAAGACCTACTCCGCCACCCTGATAAGGGGACTAATGGAAGGGAAGCACCTGGATGCAGATGCGGCCGCTAGTTACATCAACACTGCAGCTACCAGAGGCCTGTGA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |