WERAM Information


Tag Content
WERAM ID WERAM-Viv-0084
Ensembl Protein ID VIT_13s0106g00170.t01
Gene Name VIT_13s0106g00170
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_13s0106g00170 VIT_13s0106g00170.t01 VIT_13s0106g00170.t01
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.70e-12 48.1 11 91
Organism Vitis vinifera
Domain Profile
  HDAC Class-I

            class-1.txt 132 hhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekg 212
hha + fc ++ +a ++ ++krv id+d+hhG+g ++afy ++ +s h+ g +PgtG++++vg+++g
VIT_13s0106g00170.t01 11 HHAISKGPMDFCVFGNMAIAARYAQRihELKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSAHQDGS--YPGTGKIDEVGHGSG 91
9***************999998887733668*******************************9998..9**********9987 PP

Protein Sequence
(Fasta)
MGFALIRPPG HHAISKGPMD FCVFGNMAIA ARYAQRIHEL KRVFIIDFDV HHGNGTNDAF 60
YDDPDIFFLS AHQDGSYPGT GKIDEVGHGS GEGRRHQLLN EICSESGNNG DGDLCHDKGF 120
EGHDSCFKCS EECDSFEVNQ KSLSRRKGES SGVGHPAVPY PSVEIGTRKQ GRIASLLPTY 180
EDGLCPLLQR AILNKTGTYV QISSKAESII WRALRLFFLN GEQDLPAFLL VDLGIVKYPT 240
YNRINSDHIF PGLNDLLAYE EAIEVAQIMD EVLDDNNSGL VLRCISISNS RLFISCSKST 300
QASVSKSAAT FLSCLLASGV YLKAVLLGIS FLKREHG 337
Nucleotide Sequence
(Fasta)
TATGGATTAG GCTTCATAGA AAGGAATTAT TTACATTGAT GGCTCTAGAC CAACATATGC 60
TACTGTCACT ACTTTCCAGG AATCACTACT TGCAGCTGGA GCAGGAATTA CCTTAGTTGA 120
TTCAATGCAG CATCAAAGAG CAGCCAAGAC CCACCAATGG GTTTTGCATT GATAAGACCT 180
CCAGGTCATC ATGCTATTTC AAAAGGTCCT ATGGACTTCT GTGTTTTTGG AAATATGGCC 240
ATTGCAGCTC GTTATGCCCA ACGCATACAT GAATTAAAGC GTGTGTTTAT CATTGATTTT 300
GATGTTCATC ATGGCAATGG AACAAATGAT GCATTCTATG ATGACCCAGA TATATTCTTC 360
CTTTCAGCTC ATCAAGATGG AAGCTACCCT GGTACTGGTA AGATTGATGA GGTAGGTCAT 420
GGCAGTGGCG AAGGACGACG ACACCAATTG TTAAATGAGA TATGCAGTGA AAGCGGTAAC 480
AATGGGGATG GTGATCTTTG TCATGATAAG GGTTTTGAAG GTCACGATTC ATGCTTCAAA 540
TGCTCAGAAG AATGTGATAG TTTTGAAGTG AACCAGAAGT CATTGTCAAG GAGAAAAGGT 600
GAAAGTTCTG GAGTTGGGCA TCCAGCGGTG CCTTACCCTA GTGTAGAGAT TGGTACAAGA 660
AAGCAGGGTC GTATTGCCTC ACTTCTTCCT ACTTATGAAG ATGGATTATG CCCACTCCTA 720
CAAAGAGCAA TTCTGAACAA AACAGGAACC TATGTTCAGA TCTCTTCTAA AGCAGAGTCT 780
ATTATCTGGC GTGCTCTGAG GCTTTTCTTC CTTAATGGAG AGCAGGATCT ACCAGCATTT 840
CTACTAGTTG ATTTAGGAAT AGTCAAGTAT CCAACTTATA ACCGCATAAA TTCAGATCAT 900
ATCTTCCCAG GCTTGAATGA TTTACTTGCT TATGAAGAGG CCATTGAAGT TGCACAAATA 960
ATGGATGAAG TTCTTGATGA CAATAACAGT GGATTGGTGT TAAGATGCAT TAGTATATCC 1020
AACTCCCGCC TATTCATTTC CTGTTCAAAA TCAACTCAAG CTTCAGTTTC TAAATCAGCA 1080
GCTACATTCC TTTCATGCCT TTTAGCATCA GGGGTATACT TGAAAGCGGT CTTGTTGGGA 1140
ATTTCCTTTC TCAAACGTGA GCACGGCTAG 1171
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0007 EOX92582 Theobroma cacao 88 1e-46 184
WERAM-Prp-0071 EMJ12704 Prunus persica 88 3e-46 182
WERAM-Pot-0060 POPTR_0005s06520.1 Populus trichocarpa 87 2e-45 180
WERAM-Met-0183 AET04758 Medicago truncatula 87 4e-45 179
WERAM-Glm-0050 GLYMA05G32600.1 Glycine max 85 9e-45 177
WERAM-Amt-0065 ERN18144 Amborella trichopoda 84 4e-44 176
WERAM-Art-0110 AT4G33470.1 Arabidopsis thaliana 79 2e-43 173
WERAM-Sol-0006 Solyc01g009110.2.1 Solanum lycopersicum 80 6e-43 172
WERAM-Php-0127 PP1S85_154V6.1 Physcomitrella patens 80 1e-42 171
WERAM-Bro-0004 Bo1g008110.1 Brassica oleracea 68 2e-42 170
WERAM-Sei-0036 Si010171m Setaria italica 81 2e-42 170
WERAM-Brr-0061 Bra011444.1-P Brassica rapa 68 2e-42 170
WERAM-Arl-0142 scaffold_700814.1 Arabidopsis lyrata 79 2e-42 170
WERAM-Zem-0142 GRMZM2G456473_P01 Zea mays 81 6e-42 168
WERAM-Tra-0186 Traes_5AS_78CA97493.2 Triticum aestivum 80 1e-41 167
WERAM-Sem-0047 EFJ16002 Selaginella moellendorffii 80 1e-41 167
WERAM-Tru-0036 TRIUR3_18154-P1 Triticum urartu 80 1e-41 167
WERAM-Mua-0145 GSMUA_AchrUn_randomP00520_001 Musa acuminata 77 2e-41 166
WERAM-Lep-0114 LPERR12G04530.1 Leersia perrieri 80 3e-41 166
WERAM-Sob-0054 Sb03g038950.1 Sorghum bicolor 80 4e-41 166
WERAM-Orm-0105 OMERI12G03370.1 Oryza meridionalis 80 4e-41 166
WERAM-Orni-0103 ONIVA09G16260.1 Oryza nivara 80 5e-41 165
WERAM-Ori-0128 BGIOSGA037104-PA Oryza indica 80 5e-41 165
WERAM-Orp-0110 OPUNC12G04860.1 Oryza punctata 80 5e-41 165
WERAM-Orb-0120 OBART12G04910.1 Oryza barthii 80 5e-41 165
WERAM-Orl-0008 KN538685.1_FGP052 Oryza longistaminata 80 5e-41 165
WERAM-Org-0113 ORGLA12G0047100.1 Oryza glaberrima 80 5e-41 165
WERAM-Orgl-0115 OGLUM12G05720.1 Oryza glumaepatula 80 6e-41 165
WERAM-Orbr-0123 OB12G14780.1 Oryza brachyantha 78 1e-40 164
WERAM-Orr-0120 ORUFI12G05690.1 Oryza rufipogon 78 2e-40 164
WERAM-Ors-0108 OS12T0182700-01 Oryza sativa 78 2e-40 164
WERAM-Brd-0117 BRADI4G40960.1 Brachypodium distachyon 77 4e-40 162
WERAM-Osl-0036 ABP01312 Ostreococcus lucimarinus 61 3e-26 116
WERAM-Gaa-0148 ENSGACP00000019223.1 Gasterosteus aculeatus 54 4e-26 116
WERAM-Ten-0099 ENSTNIP00000000138.1 Tetraodon nigroviridis 54 6e-26 115
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 53 6e-26 115
WERAM-Tar-0171 ENSTRUP00000035900.1 Takifugu rubripes 54 6e-26 115
WERAM-Anp-0061 ENSAPLP00000006782.1 Anas platyrhynchos 54 6e-26 115
WERAM-Orn-0049 ENSONIP00000005635.1 Oreochromis niloticus 54 7e-26 115
WERAM-Xim-0085 ENSXMAP00000008038.1 Xiphophorus maculatus 53 1e-25 114
WERAM-Meg-0108 ENSMGAP00000010913.2 Meleagris gallopavo 54 1e-25 114
WERAM-Pof-0042 ENSPFOP00000003781.2 Poecilia formosa 53 1e-25 114
WERAM-Gaga-0067 ENSGALP00000010190.4 Gallus gallus 54 2e-25 114
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 53 2e-25 114
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 52 2e-25 113
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 53 2e-25 113
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 53 3e-25 113
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 52 3e-25 113
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 52 3e-25 113
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 52 3e-25 112
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 52 4e-25 112
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 53 4e-25 112
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 51 4e-25 112
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 52 5e-25 112
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 52 5e-25 112
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 51 5e-25 112
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 52 5e-25 112
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 51 6e-25 112
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 52 6e-25 112
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 53 6e-25 112
WERAM-Mae-0085 ENSMEUP00000008564.1 Macropus eugenii 51 7e-25 112
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 52 7e-25 112
WERAM-Ptv-0096 ENSPVAP00000008849.1 Pteropus vampyrus 53 7e-25 112
WERAM-Prc-0083 ENSPCAP00000007167.1 Procavia capensis 52 8e-25 112
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 52 8e-25 111
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 52 8e-25 111
WERAM-Paa-0072 ENSPANP00000008610.1 Papio anubis 52 1e-24 111
WERAM-Xet-0073 ENSXETP00000023344.3 Xenopus tropicalis 52 1e-24 111
WERAM-Gog-0184 ENSGGOP00000016066.2 Gorilla gorilla 52 1e-24 111
WERAM-Anc-0160 ENSACAP00000015012.3 Anolis carolinensis 49 1e-24 111
WERAM-Bot-0201 ENSBTAP00000038136.4 Bos taurus 52 1e-24 111
WERAM-Pat-0040 ENSPTRP00000008320.5 Pan troglodytes 52 1e-24 111
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 51 1e-24 111
WERAM-Poa-0042 ENSPPYP00000005074.1 Pongo abelii 52 1e-24 111
WERAM-Nol-0194 ENSNLEP00000021748.1 Nomascus leucogenys 52 1e-24 111
WERAM-Chs-0077 ENSCSAP00000002870.1 Chlorocebus sabaeus 52 1e-24 111
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 52 1e-24 110
WERAM-Mam-0226 ENSMMUP00000028518.2 Macaca mulatta 52 2e-24 110
WERAM-Eqc-0166 ENSECAP00000018277.1 Equus caballus 52 2e-24 110
WERAM-Dan-0112 ENSDNOP00000014271.3 Dasypus novemcinctus 52 2e-24 110
WERAM-Orc-0187 ENSOCUP00000019525.1 Oryctolagus cuniculus 53 2e-24 110
WERAM-Tut-0143 ENSTTRP00000011934.1 Tursiops truncatus 52 3e-24 110
WERAM-Ova-0207 ENSOARP00000020819.1 Ovis aries 52 3e-24 110
WERAM-Ocp-0101 ENSOPRP00000009320.1 Ochotona princeps 51 3e-24 109
WERAM-Leo-0108 ENSLOCP00000014009.1 Lepisosteus oculatus 51 3e-24 109
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 54 3e-24 109
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 51 4e-24 109
WERAM-Mod-0016 ENSMODP00000001749.3 Monodelphis domestica 49 8e-24 108
WERAM-Pem-0075 ENSPMAP00000008483.1 Petromyzon marinus 52 2e-23 107
WERAM-Caj-0152 ENSCJAP00000019002.2 Callithrix jacchus 48 3e-23 106
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 49 5e-23 105
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 52 8e-23 105
WERAM-Mim-0009 ENSMICP00000000769.1 Microcebus murinus 49 8e-23 105
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 49 1e-22 104
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 49 1e-22 104
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 49 1e-22 104
WERAM-Cae-0060 F41H10.6b Caenorhabditis elegans 46 5e-22 102
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 51 1e-21 101
WERAM-Chr-0006 EDP01653 Chlamydomonas reinhardtii 57 1e-21 100
WERAM-Usm-0012 UM02102P0 Ustilago maydis 51 1e-21 100
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 51 2e-21 100
WERAM-Caa-0034 KGT64501 Candida albicans 46 7e-21 98.6
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 45 7e-21 98.6
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 44 7e-21 98.6
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 47 1e-20 98.2
WERAM-Miv-0034 MVLG_04888T0 Microbotryum violaceum 39 1e-20 97.8
WERAM-Coi-0028 EAS30926 Coccidioides immitis 43 1e-20 97.8
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 49 2e-20 97.1
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 43 7e-20 95.5
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 43 7e-20 95.5
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 46 7e-20 95.5
WERAM-Tum-0026 CAZ84932 Tuber melanosporum 41 8e-20 95.1
WERAM-Aso-0015 CADAORAP00001816 Aspergillus oryzae 44 8e-20 95.1
WERAM-Yal-0023 CAG79971 Yarrowia lipolytica 49 9e-20 95.1
Created Date 25-Jun-2016