WERAM Information

Tag Content
WERAM ID WERAM-Orgl-0115
Ensembl Protein ID OGLUM12G05720.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OGLUM12G05720 OGLUM12G05720.1 OGLUM12G05720.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.80e-25 91.3 123 391
Organism Oryza glumaepatula
Domain Profile
  HDAC Class-I
      class-1.txt  37 yglskkleivkpkkasaeellkfhseeyieflkkvepenae...........els.kelkkfnvge.....dcPvfdglfeycqlitGasle.. 111
                      +  s+ lei   + as ++++ +hs  yi+ l+k  +  ++           +++ +++  ++        +c    + f+ c l++Ga ++  
  OGLUM12G05720.1 123 HRGSQVLEIQDFQPASLDDIALVHSRSYITGLEKAMSRASDeglifiegtgpTYAtQTVMIYAHSLlfffpQCFSRWKTFQECLLSAGAGITlv 216
                      4455566666666666666666666666666666655555555666665555332111222221111122244444556666777777765511 PP
      class-1.txt 112 ....aakkLnkkea.diainwaGGlhhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDgveeafyttdrvmtvsfhkygeeff 198
                          aa+kL  k     a+      hha  +   Gfc   +i +a    + +h  krv+ id+d+hhG+g  +afy    ++ +s h+ g   +
  OGLUM12G05720.1 217 dsvvAASKLGPKPPlGFALVRP-PGHHAVPEGPMGFCVFGNIAVAARYAQNQHglKRVMIIDFDVHHGNGTCDAFYDDPDIFFLSTHQLGS--Y 307
                      1111333343332212333333.349****************99998777654349***********************************..9 PP
      class-1.txt 199 PgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvk 282
                      PgtG++++vg+++g   ++n+Pl  g  D  ++  f +vi +  ++f+P+++++  G D+ a D+l+  ++++ ++      ++
  OGLUM12G05720.1 308 PGTGKIHQVGQGNGEGTTLNLPLPGGSGDYAMRCAFDEVIAPAAQRFKPDIILVSAGYDAHALDPLAGLQFTTGTFYMLAARIR 391
                      *******************************************************************99998876655544444 PP
Protein Sequence
(Fasta)		MEQLWVPSLP ILGGRILPML RHYCGFGSHH PLTWRSLQIT GRKQKHNGCW IAYCLPSDNG 60
TSISDTNGVR KDLALPDNLL RDAHILYCTS PAMGHNKEAH PETNKRVPAI VDALEKLELT 120
SKHRGSQVLE IQDFQPASLD DIALVHSRSY ITGLEKAMSR ASDEGLIFIE GTGPTYATQT 180
VMIYAHSLLF FFPQCFSRWK TFQECLLSAG AGITLVDSVV AASKLGPKPP LGFALVRPPG 240
HHAVPEGPMG FCVFGNIAVA ARYAQNQHGL KRVMIIDFDV HHGNGTCDAF YDDPDIFFLS 300
THQLGSYPGT GKIHQVGQGN GEGTTLNLPL PGGSGDYAMR CAFDEVIAPA AQRFKPDIIL 360
VSAGYDAHAL DPLAGLQFTT GTFYMLAARI REVAAELCGG RCVFFLEGGY NLESLSSSVA 420
DTFRAFLGEP SLAARFDDPA MLYEEPTRKI REAIDKAKHL HSL 463
Nucleotide Sequence
(Fasta)		AAAAAAAAAA AAAAAACGGA AAAAATGCCA TTGTTTTCGC TAGAAAAGAA CACGAGAAGA 60
TAGCGAAAGC TTGGGGGTGA AATCCTGTGG TGTTTCATGG ACCAAGCTAC TCGTTGAAGA 120
GATAATTTCC CTTGTTTTGT ATTTTCTTTT TCCGATTAAG AGGAAAGAAC CAAGCAAAGA 180
GGTGGTAGAG GAGAGGGGAT TCAGTGAGGA AGGGAGAGAG AGATAGATCC CTGGAGGTTT 240
GCAGGAGGGG ATGGAACAGC TGTGGGTGCC ATCGCTTCCG ATTCTTGGAG GAAGGATATT 300
GCCTATGCTC AGGCACTACT GTGGCTTTGG AAGTCATCAT CCCTTAACCT GGAGAAGCTT 360
ACAAATTACT GGAAGAAAAC AGAAGCATAA TGGGTGTTGG ATTGCATACT GCTTACCAAG 420
CGATAATGGA ACTTCTATTT CAGACACAAA TGGTGTTCGA AAAGACTTAG CTTTGCCTGA 480
CAATTTGCTT CGTGATGCTC ATATTCTCTA TTGTACATCT CCTGCCATGG GTCATAACAA 540
GGAAGCGCAT CCAGAAACTA ACAAAAGAGT TCCTGCAATA GTTGATGCTC TCGAAAAACT 600
GGAGCTTACT TCGAAGCATC GTGGTTCACA GGTTCTTGAA ATTCAAGATT TCCAACCTGC 660
TTCACTTGAT GATATTGCAC TAGTTCATTC AAGATCATAC ATAACTGGAC TTGAAAAGGC 720
TATGAGTAGG GCTTCAGATG AAGGTTTGAT ATTCATTGAA GGAACTGGAC CTACATATGC 780
TACCCAGACT GTAATGATCT ATGCACATTC CCTCTTGTTT TTTTTCCCCC AATGCTTTTC 840
TCGTTGGAAG ACTTTCCAAG AATGTCTCCT TTCTGCTGGT GCTGGAATTA CATTGGTTGA 900
TTCAGTGGTT GCAGCATCAA AGTTGGGCCC GAAGCCACCG CTCGGCTTTG CCTTAGTAAG 960
GCCACCAGGA CATCATGCTG TTCCTGAAGG TCCCATGGGC TTCTGTGTCT TTGGGAACAT 1020
TGCAGTGGCA GCTCGGTATG CTCAGAATCA ACATGGTTTA AAGCGGGTCA TGATAATAGA 1080
TTTTGATGTT CACCACGGTA ACGGCACATG TGACGCCTTT TATGATGATC CGGACATATT 1140
CTTCCTCTCA ACTCATCAGC TTGGAAGCTA TCCTGGCACC GGTAAGATCC ACCAAGTTGG 1200
CCAGGGCAAC GGCGAGGGCA CGACGCTCAA CCTGCCACTA CCCGGTGGCT CAGGCGATTA 1260
CGCAATGAGG TGCGCGTTTG ATGAGGTTAT TGCCCCAGCT GCCCAGCGGT TCAAACCTGA 1320
CATCATCCTC GTTTCAGCCG GGTACGACGC GCACGCGCTG GACCCGCTGG CGGGGCTGCA 1380
GTTCACGACG GGGACGTTCT ACATGCTGGC GGCGAGGATC CGGGAGGTGG CGGCGGAGCT 1440
GTGCGGCGGG CGGTGCGTCT TCTTCCTGGA GGGCGGCTAC AACCTGGAGT CGCTGTCCAG 1500
CTCAGTGGCC GACACCTTCC GTGCGTTCCT CGGCGAGCCC AGCCTCGCCG CGCGGTTCGA 1560
CGACCCGGCG ATGCTCTACG AGGAGCCCAC GCGGAAGATC AGGGAGGCCA TCGACAAGGC 1620
CAAGCACCTC CACTCGCTCT AAGCGCGGCG CCCAGAAGAT TGCAACAGTA TCTATACTTG 1680
GCTGCTGAAA CTGCTTGCTG ATGCTGGTCA ACAACTCAAG ATCATATTCA TGTCTTGTTA 1740
GCTTTTGCAC TTTCCAGTGT AGCATTGTAC ATCGGAAAAG CACGGCATAG TCATTTACAT 1800
CTTAGTTGCT GTGAATCAGA TACATTCGAT CGCAAGCTTG TCAATAGTTC AATACCAGTT 1860
GTGTAGATTA ATACCAGTAC TACTGCGATT ACTTGCATCT TTCTACTCCA GTTAGTGTCC 1920
AGTGGAACCT GTCGAGCTAT CAGCATTTTG TTTTATAATA CAAAAGCTGA CATTTTTTTC 1980
CCCATATTTA TTAGTCACCT TAATTTGTAT AACGTTTAGT CTAAAATTGC ATAATACAAA 2040
AAGGCTACAC CTTTAGTATA AACCCAC 2068
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orl-0008 KN538685.1_FGP052 Oryza longistaminata 100 0.0 956
WERAM-Orr-0120 ORUFI12G05690.1 Oryza rufipogon 99 0.0 954
WERAM-Orm-0105 OMERI12G03370.1 Oryza meridionalis 94 0.0 925
WERAM-Org-0113 ORGLA12G0047100.1 Oryza glaberrima 96 0.0 905
WERAM-Ori-0128 BGIOSGA037104-PA Oryza indica 95 0.0 902
WERAM-Orni-0103 ONIVA09G16260.1 Oryza nivara 95 0.0 901
WERAM-Orb-0120 OBART12G04910.1 Oryza barthii 95 0.0 900
WERAM-Ors-0108 OS12T0182700-01 Oryza sativa 95 0.0 900
WERAM-Orp-0110 OPUNC12G04860.1 Oryza punctata 94 0.0 891
WERAM-Lep-0114 LPERR12G04530.1 Leersia perrieri 89 0.0 836
WERAM-Orbr-0123 OB12G14780.1 Oryza brachyantha 86 0.0 817
WERAM-Brd-0117 BRADI4G40960.1 Brachypodium distachyon 81 0.0 773
WERAM-Tra-0186 Traes_5AS_78CA97493.2 Triticum aestivum 80 0.0 748
WERAM-Sei-0036 Si010171m Setaria italica 77 0.0 711
WERAM-Zem-0142 GRMZM2G456473_P01 Zea mays 77 0.0 707
WERAM-Sob-0054 Sb03g038950.1 Sorghum bicolor 78 0.0 704
WERAM-Tru-0036 TRIUR3_18154-P1 Triticum urartu 74 0.0 685
WERAM-Mua-0145 GSMUA_AchrUn_randomP00520_001 Musa acuminata 65 1e-176 616
WERAM-Viv-0021 VIT_04s0044g01510.t01 Vitis vinifera 71 8e-166 580
WERAM-Pot-0060 POPTR_0005s06520.1 Populus trichocarpa 67 6e-162 567
WERAM-Arl-0142 scaffold_700814.1 Arabidopsis lyrata 67 1e-157 553
WERAM-Art-0110 AT4G33470.1 Arabidopsis thaliana 65 2e-156 550
WERAM-Glm-0050 GLYMA05G32600.1 Glycine max 67 5e-156 548
WERAM-Brr-0061 Bra011444.1-P Brassica rapa 64 3e-155 545
WERAM-Bro-0004 Bo1g008110.1 Brassica oleracea 62 6e-155 544
WERAM-Prp-0071 EMJ12704 Prunus persica 69 2e-154 542
WERAM-Met-0183 AET04758 Medicago truncatula 66 2e-154 542
WERAM-Php-0127 PP1S85_154V6.1 Physcomitrella patens 63 1e-147 520
WERAM-Amt-0065 ERN18144 Amborella trichopoda 64 2e-146 516
WERAM-Sem-0047 EFJ16002 Selaginella moellendorffii 55 5e-122 435
WERAM-Sol-0006 Solyc01g009110.2.1 Solanum lycopersicum 75 1e-120 430
WERAM-Thc-0007 EOX92582 Theobroma cacao 77 4e-114 409
WERAM-Osl-0036 ABP01312 Ostreococcus lucimarinus 47 3e-91 333
WERAM-Chr-0006 EDP01653 Chlamydomonas reinhardtii 55 3e-54 210
WERAM-Aim-0036 ENSAMEP00000002564.1 Ailuropoda melanoleuca 36 7e-46 182
WERAM-Dar-0023 ENSDARP00000124246.1 Danio rerio 36 8e-46 182
WERAM-Myl-0003 ENSMLUP00000000417.2 Myotis lucifugus 39 9e-46 182
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 34 1e-45 181
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 34 2e-45 181
WERAM-Mup-0023 ENSMPUP00000002307.1 Mustela putorius furo 36 2e-45 181
WERAM-Coi-0028 EAS30926 Coccidioides immitis 34 3e-45 180
WERAM-Tut-0141 ENSTTRP00000011664.1 Tursiops truncatus 38 7e-45 179
WERAM-Caf-0004 ENSCAFP00000000979.4 Canis familiaris 37 9e-45 178
WERAM-Eqc-0086 ENSECAP00000010704.1 Equus caballus 36 2e-44 177
WERAM-Fec-0119 ENSFCAP00000011049.3 Felis catus 37 3e-44 176
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 34 4e-44 176
WERAM-Mum-0213 ENSMUSP00000080832.5 Mus musculus 34 5e-44 176
WERAM-Tar-0042 ENSTRUP00000010127.1 Takifugu rubripes 34 6e-44 176
WERAM-Cae-0060 F41H10.6b Caenorhabditis elegans 41 6e-44 176
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 33 6e-44 176
WERAM-Ere-0078 ENSEEUP00000006690.1 Erinaceus europaeus 36 7e-44 175
WERAM-Cap-0164 ENSCPOP00000013386.2 Cavia porcellus 35 1e-43 174
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 33 1e-43 174
WERAM-Drm-0028 FBpp0290988 Drosophila melanogaster 33 1e-43 174
WERAM-Pof-0022 ENSPFOP00000001799.2 Poecilia formosa 33 2e-43 174
WERAM-Cag-0018 CAG60803 Candida glabrata 32 3e-43 173
WERAM-Pug-0031 EFP89333 Puccinia graminis 32 3e-43 173
WERAM-Otg-0149 ENSOGAP00000012689.2 Otolemur garnettii 35 4e-43 173
WERAM-Gog-0159 ENSGGOP00000014095.2 Gorilla gorilla 34 4e-43 173
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 33 4e-43 173
WERAM-Ict-0132 ENSSTOP00000013675.2 Ictidomys tridecemlineatus 34 5e-43 172
WERAM-Ten-0061 ENSTNIP00000000291.1 Tetraodon nigroviridis 42 6e-43 172
WERAM-Bot-0106 ENSBTAP00000014602.4 Bos taurus 36 6e-43 172
WERAM-Paa-0009 ENSPANP00000013655.1 Papio anubis 34 8e-43 172
WERAM-Ran-0201 ENSRNOP00000063689.2 Rattus norvegicus 32 1e-42 171
WERAM-Chs-0051 ENSCSAP00000001305.1 Chlorocebus sabaeus 35 1e-42 171
WERAM-Pat-0122 ENSPTRP00000025053.4 Pan troglodytes 35 1e-42 171
WERAM-Hos-0058 ENSP00000216271.5 Homo sapiens 35 1e-42 171
WERAM-Xim-0154 ENSXMAP00000012744.1 Xiphophorus maculatus 36 1e-42 171
WERAM-Aet-0088 EMT31322 Aegilops tauschii 40 1e-42 171
WERAM-Hov-0018 MLOC_16422.1 Hordeum vulgare 35 2e-42 171
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 32 2e-42 171
WERAM-Mod-0016 ENSMODP00000001749.3 Monodelphis domestica 32 3e-42 170
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 41 3e-42 170
WERAM-Nol-0005 ENSNLEP00000000692.2 Nomascus leucogenys 34 3e-42 170
WERAM-Orn-0108 ENSONIP00000011544.1 Oreochromis niloticus 41 4e-42 169
WERAM-Anc-0037 ENSACAP00000004435.3 Anolis carolinensis 30 4e-42 169
WERAM-Sus-0012 ENSSSCP00000001039.2 Sus scrofa 36 5e-42 169
WERAM-Gaa-0079 ENSGACP00000010554.1 Gasterosteus aculeatus 32 5e-42 169
WERAM-Fia-0119 ENSFALP00000010264.1 Ficedula albicollis 34 5e-42 169
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 30 5e-42 169
WERAM-Ect-0100 ENSETEP00000011415.1 Echinops telfairi 37 6e-42 169
WERAM-Caa-0034 KGT64501 Candida albicans 31 6e-42 169
WERAM-Orc-0102 ENSOCUP00000008741.3 Oryctolagus cuniculus 35 8e-42 168
WERAM-Loa-0142 ENSLAFP00000012719.4 Loxodonta africana 35 1e-41 168
WERAM-Orla-0013 ENSORLP00000001341.1 Oryzias latipes 41 2e-41 167
WERAM-Mao-0002 MGG_01076T0 Magnaporthe oryzae 32 3e-41 166
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 42 4e-41 166
WERAM-Pes-0105 ENSPSIP00000013270.1 Pelodiscus sinensis 33 5e-41 166
WERAM-Kop-0012 CAY68916 Komagataella pastoris 31 5e-41 166
WERAM-Trv-0041 EHK18675 Trichoderma virens 32 5e-41 166
WERAM-Gaga-0107 ENSGALP00000017619.4 Gallus gallus 35 6e-41 166
WERAM-Gag-0014 GGTG_04308T0 Gaeumannomyces graminis 30 6e-41 166
WERAM-Caj-0009 ENSCJAP00000001947.2 Callithrix jacchus 34 7e-41 166
WERAM-Mam-0095 ENSMMUP00000014626.2 Macaca mulatta 34 7e-41 165
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 34 7e-41 165
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 32 8e-41 165
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 31 8e-41 165
WERAM-Anp-0079 ENSAPLP00000009519.1 Anas platyrhynchos 35 9e-41 165
WERAM-Poa-0162 ENSPPYP00000019901.2 Pongo abelii 34 9e-41 165
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 34 9e-41 165
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 34 1e-40 165
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 33 1e-40 164
WERAM-Meg-0084 ENSMGAP00000008226.2 Meleagris gallopavo 36 1e-40 164
WERAM-Usm-0012 UM02102P0 Ustilago maydis 33 2e-40 164
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 34 2e-40 164
WERAM-Gam-0051 ENSGMOP00000005244.1 Gadus morhua 33 2e-40 164
WERAM-Leo-0108 ENSLOCP00000014009.1 Lepisosteus oculatus 42 2e-40 164
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 42 4e-40 163
WERAM-Map-0033 MAPG_10880T0 Magnaporthe poae 30 5e-40 162
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 32 8e-40 162
WERAM-Put-0014 PTTG_07163P0 Puccinia triticina 31 8e-40 162
WERAM-Prc-0083 ENSPCAP00000007167.1 Procavia capensis 32 1e-39 162
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 34 1e-39 161
WERAM-Asg-0010 AAS51704 Ashbya gossypii 32 1e-39 161
Created Date 25-Jun-2016