WERAM Information

Tag Content
WERAM ID WERAM-Sol-0006
Ensembl Protein ID Solyc01g009110.2.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc01g009110.2 Solyc01g009110.2.1 Solyc01g009110.2.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.00e-28 100.6 43 199
Organism Solanum lycopersicum
Domain Profile
  HDAC Class-I
         class-1.txt 132 hhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDgveeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvP 220
                         hha  + a Gfc   +i +a    +++h  +rv  id+d+hhG+g ++afy+   ++ +s h+ g   +PgtG+++++g+++g   ++n+P
  Solyc01g009110.2.1  43 HHAVPKGAMGFCVFGNIAIAARYAQRMHglQRVFIIDFDVHHGNGTNDAFYEDPDIFFLSTHQAGS--YPGTGKIDQIGCGSGEGSTLNLP 131
                         9*******************99988865449**********************************9..9********************** PP
         class-1.txt 221 lkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpl 288
                         l  g  D+ ++++f +vi +  ++f+P+++++  G D+   D+l++ ++++ ++    + +k+    l
  Solyc01g009110.2.1 132 LPGGSGDTAMRTVFDEVIVPCAQRFKPDIILVSAGYDAHLLDPLASLQFTTGTYYMLASSIKQLAKDL 199
                         *************************************************9988877777777665443 PP
Protein Sequence
(Fasta)		MQTFQESLLA AGAGISLVDS VVAASRVSKD PPVAFALIRP PGHHAVPKGA MGFCVFGNIA 60
IAARYAQRMH GLQRVFIIDF DVHHGNGTND AFYEDPDIFF LSTHQAGSYP GTGKIDQIGC 120
GSGEGSTLNL PLPGGSGDTA MRTVFDEVIV PCAQRFKPDI ILVSAGYDAH LLDPLASLQF 180
TTGTYYMLAS SIKQLAKDLC GGRCVFFLEG GYNLSSLSNS VAESFRAFLG DRSLASELDD 240
PSYLHEEPLK KVKQIIEKVK HIHSF 265
Nucleotide Sequence
(Fasta)		ATGCAGACAT TCCAAGAGTC GTTATTGGCA GCTGGAGCTG GGATTTCCTT GGTTGATTCA 60
GTGGTTGCAG CATCCAGAGT AAGCAAAGAT CCTCCTGTCG CTTTTGCACT AATTCGACCT 120
CCTGGTCACC ATGCTGTTCC GAAGGGGGCC ATGGGCTTTT GTGTGTTTGG AAATATTGCT 180
ATTGCTGCTC GTTATGCTCA AAGAATGCAT GGATTGCAAC GTGTTTTTAT CATAGACTTT 240
GATGTCCATC ATGGAAATGG AACCAATGAT GCCTTCTACG AGGACCCAGA TATATTTTTC 300
CTTTCAACTC ACCAAGCTGG AAGTTATCCA GGAACGGGTA AGATAGATCA AATTGGTTGT 360
GGAAGTGGTG AAGGATCAAC ACTAAACCTC CCTTTACCTG GAGGATCCGG TGATACAGCA 420
ATGCGAACAG TTTTTGATGA AGTTATTGTA CCGTGTGCTC AAAGGTTCAA GCCAGATATA 480
ATCCTTGTTT CAGCTGGGTA TGATGCCCAT CTGTTGGATC CACTTGCCAG CTTACAGTTC 540
ACAACAGGAA CATATTACAT GCTAGCCTCC AGCATTAAGC AACTTGCTAA AGATTTATGT 600
GGGGGACGTT GCGTGTTTTT CTTAGAAGGG GGATATAATC TCAGTTCTCT GTCAAATTCA 660
GTTGCAGAAT CATTTCGTGC TTTTCTTGGT GATCGGAGCT TAGCTTCAGA GCTCGATGAT 720
CCATCCTACT TGCACGAAGA GCCATTGAAG AAGGTGAAGC AGATTATTGA AAAAGTGAAG 780
CACATACATT CCTTTTGAAA GCTTATATTG GCAGTGGTCA AGAATTATTA TACAGCTTTG 840
TATAGGACAC CATGACTTTT CTATAATTTG TATACAGCTT TGTTTAGTAT ATACACATAT 900
AAATTATATT GATGTTGTAA ATTCGTAACA AAAATTTGTT TAAAAGTACA AAGCTAAAAT 960
TGATGAACGT CCATTCTGTT TAATTATTTC TTTCTTAGAT AACAAATGCT TATATATTGT 1020
ATGATCCTGC AGAAGAATTG ATGTGTGTGT ATATATATGA AGGAAAAATG CAACTTT 1078
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Viv-0021 VIT_04s0044g01510.t01 Vitis vinifera 86 2e-134 475
WERAM-Prp-0071 EMJ12704 Prunus persica 82 2e-131 465
WERAM-Met-0183 AET04758 Medicago truncatula 80 2e-129 458
WERAM-Glm-0050 GLYMA05G32600.1 Glycine max 81 2e-129 458
WERAM-Mua-0145 GSMUA_AchrUn_randomP00520_001 Musa acuminata 79 2e-127 452
WERAM-Pot-0060 POPTR_0005s06520.1 Populus trichocarpa 81 2e-127 452
WERAM-Art-0110 AT4G33470.1 Arabidopsis thaliana 79 1e-125 446
WERAM-Brr-0061 Bra011444.1-P Brassica rapa 79 2e-124 442
WERAM-Arl-0142 scaffold_700814.1 Arabidopsis lyrata 79 2e-124 442
WERAM-Bro-0004 Bo1g008110.1 Brassica oleracea 79 6e-124 440
WERAM-Tra-0186 Traes_5AS_78CA97493.2 Triticum aestivum 78 2e-122 435
WERAM-Sei-0036 Si010171m Setaria italica 77 3e-122 434
WERAM-Brd-0117 BRADI4G40960.1 Brachypodium distachyon 78 5e-122 434
WERAM-Orr-0120 ORUFI12G05690.1 Oryza rufipogon 76 2e-121 432
WERAM-Thc-0007 EOX92582 Theobroma cacao 82 3e-121 431
WERAM-Ors-0108 OS12T0182700-01 Oryza sativa 76 4e-121 431
WERAM-Orm-0105 OMERI12G03370.1 Oryza meridionalis 76 4e-121 431
WERAM-Sob-0054 Sb03g038950.1 Sorghum bicolor 78 4e-121 431
WERAM-Orl-0008 KN538685.1_FGP052 Oryza longistaminata 75 5e-121 431
WERAM-Orgl-0115 OGLUM12G05720.1 Oryza glumaepatula 75 5e-121 430
WERAM-Zem-0142 GRMZM2G456473_P01 Zea mays 77 6e-121 430
WERAM-Orni-0103 ONIVA09G16260.1 Oryza nivara 76 8e-121 430
WERAM-Org-0113 ORGLA12G0047100.1 Oryza glaberrima 76 1e-120 429
WERAM-Orb-0120 OBART12G04910.1 Oryza barthii 76 1e-120 429
WERAM-Orp-0110 OPUNC12G04860.1 Oryza punctata 76 2e-120 429
WERAM-Ori-0128 BGIOSGA037104-PA Oryza indica 76 3e-120 428
WERAM-Lep-0114 LPERR12G04530.1 Leersia perrieri 75 4e-120 427
WERAM-Tru-0036 TRIUR3_18154-P1 Triticum urartu 77 4e-120 427
WERAM-Amt-0065 ERN18144 Amborella trichopoda 74 5e-120 427
WERAM-Orbr-0123 OB12G14780.1 Oryza brachyantha 76 1e-119 426
WERAM-Php-0127 PP1S85_154V6.1 Physcomitrella patens 74 1e-117 419
WERAM-Sem-0034 EFJ07952 Selaginella moellendorffii 69 1e-104 376
WERAM-Osl-0036 ABP01312 Ostreococcus lucimarinus 54 3e-79 291
WERAM-Chr-0006 EDP01653 Chlamydomonas reinhardtii 54 2e-57 219
WERAM-Cae-0060 F41H10.6b Caenorhabditis elegans 37 8e-48 187
WERAM-Mup-0023 ENSMPUP00000002307.1 Mustela putorius furo 42 2e-45 179
WERAM-Tut-0141 ENSTTRP00000011664.1 Tursiops truncatus 40 2e-45 179
WERAM-Caf-0004 ENSCAFP00000000979.4 Canis familiaris 40 3e-45 179
WERAM-Aim-0036 ENSAMEP00000002564.1 Ailuropoda melanoleuca 42 3e-45 179
WERAM-Fec-0119 ENSFCAP00000011049.3 Felis catus 39 4e-45 178
WERAM-Myl-0003 ENSMLUP00000000417.2 Myotis lucifugus 43 1e-44 176
WERAM-Aet-0088 EMT31322 Aegilops tauschii 43 6e-44 174
WERAM-Ten-0172 ENSTNIP00000017010.1 Tetraodon nigroviridis 38 8e-44 174
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 39 1e-43 174
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 41 2e-43 173
WERAM-Xet-0073 ENSXETP00000023344.3 Xenopus tropicalis 39 2e-43 173
WERAM-Eqc-0086 ENSECAP00000010704.1 Equus caballus 38 2e-43 172
WERAM-Dar-0170 ENSDARP00000100072.2 Danio rerio 37 2e-43 172
WERAM-Hov-0018 MLOC_16422.1 Hordeum vulgare 43 3e-43 172
WERAM-Sus-0012 ENSSSCP00000001039.2 Sus scrofa 39 4e-43 172
WERAM-Anc-0037 ENSACAP00000004435.3 Anolis carolinensis 38 5e-43 171
WERAM-Cap-0164 ENSCPOP00000013386.2 Cavia porcellus 40 1e-42 170
WERAM-Otg-0149 ENSOGAP00000012689.2 Otolemur garnettii 37 1e-42 170
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 38 1e-42 170
WERAM-Pof-0123 ENSPFOP00000010612.2 Poecilia formosa 40 1e-42 170
WERAM-Leo-0108 ENSLOCP00000014009.1 Lepisosteus oculatus 41 1e-42 170
WERAM-Meg-0084 ENSMGAP00000008226.2 Meleagris gallopavo 40 2e-42 169
WERAM-Xim-0154 ENSXMAP00000012744.1 Xiphophorus maculatus 37 2e-42 169
WERAM-Ran-0209 ENSRNOP00000009295.5 Rattus norvegicus 40 2e-42 169
WERAM-Mum-0213 ENSMUSP00000080832.5 Mus musculus 41 2e-42 169
WERAM-Paa-0009 ENSPANP00000013655.1 Papio anubis 40 3e-42 169
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 41 3e-42 169
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 43 4e-42 169
WERAM-Cag-0018 CAG60803 Candida glabrata 37 4e-42 168
WERAM-Orn-0072 ENSONIP00000007998.1 Oreochromis niloticus 37 4e-42 168
WERAM-Drm-0028 FBpp0290988 Drosophila melanogaster 41 5e-42 168
WERAM-Anp-0022 ENSAPLP00000003127.1 Anas platyrhynchos 39 5e-42 168
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 36 6e-42 168
WERAM-Fia-0119 ENSFALP00000010264.1 Ficedula albicollis 41 6e-42 168
WERAM-Pat-0122 ENSPTRP00000025053.4 Pan troglodytes 40 6e-42 168
WERAM-Bot-0106 ENSBTAP00000014602.4 Bos taurus 39 6e-42 168
WERAM-Gog-0159 ENSGGOP00000014095.2 Gorilla gorilla 40 6e-42 167
WERAM-Tar-0138 ENSTRUP00000030067.1 Takifugu rubripes 36 7e-42 167
WERAM-Hos-0058 ENSP00000216271.5 Homo sapiens 40 8e-42 167
WERAM-Tag-0059 ENSTGUP00000004152.1 Taeniopygia guttata 39 9e-42 167
WERAM-Ict-0132 ENSSTOP00000013675.2 Ictidomys tridecemlineatus 39 1e-41 167
WERAM-Ere-0078 ENSEEUP00000006690.1 Erinaceus europaeus 40 1e-41 167
WERAM-Ect-0100 ENSETEP00000011415.1 Echinops telfairi 40 1e-41 167
WERAM-Coi-0028 EAS30926 Coccidioides immitis 39 2e-41 166
WERAM-Pes-0126 ENSPSIP00000015149.1 Pelodiscus sinensis 40 2e-41 166
WERAM-Aso-0015 CADAORAP00001816 Aspergillus oryzae 38 2e-41 166
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 39 2e-41 166
WERAM-Gaga-0107 ENSGALP00000017619.4 Gallus gallus 41 3e-41 166
WERAM-Gaa-0079 ENSGACP00000010554.1 Gasterosteus aculeatus 38 3e-41 165
WERAM-Nol-0005 ENSNLEP00000000692.2 Nomascus leucogenys 39 4e-41 165
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 37 5e-41 165
WERAM-Chs-0051 ENSCSAP00000001305.1 Chlorocebus sabaeus 39 7e-41 164
WERAM-Mod-0016 ENSMODP00000001749.3 Monodelphis domestica 36 7e-41 164
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 39 8e-41 164
WERAM-Mam-0226 ENSMMUP00000028518.2 Macaca mulatta 36 1e-40 164
WERAM-Ocp-0153 ENSOPRP00000015747.2 Ochotona princeps 38 1e-40 163
WERAM-Mae-0085 ENSMEUP00000008564.1 Macropus eugenii 37 1e-40 163
WERAM-Asm-0162 ENSAMXP00000016088.1 Astyanax mexicanus 39 1e-40 163
WERAM-Gam-0051 ENSGMOP00000005244.1 Gadus morhua 38 1e-40 163
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 39 2e-40 163
WERAM-Orc-0102 ENSOCUP00000008741.3 Oryctolagus cuniculus 39 2e-40 163
WERAM-Tum-0026 CAZ84932 Tuber melanosporum 38 3e-40 162
WERAM-Ptv-0096 ENSPVAP00000008849.1 Pteropus vampyrus 36 3e-40 162
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 37 3e-40 162
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 36 3e-40 162
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 38 4e-40 162
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 36 5e-40 161
WERAM-Prc-0083 ENSPCAP00000007167.1 Procavia capensis 37 5e-40 161
WERAM-Kop-0012 CAY68916 Komagataella pastoris 37 6e-40 161
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 37 6e-40 161
WERAM-Phn-0010 SNOT_01279 Phaeosphaeria nodorum 37 6e-40 161
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 36 1e-39 160
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 37 1e-39 160
Created Date 25-Jun-2016