| Tag |
Content |
| WERAM ID |
WERAM-Sei-0036 |
| Ensembl Protein ID |
Si010171m |
| Gene Name |
SETIT_010171mg |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
9.90e-27 |
95.3 |
100 |
380 |
|
| Organism |
Setaria italica |
| Domain Profile |
HDAC Class-I
class-1.txt 30 theLv..lnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvf..dglfeycqlitGasleaakkLnkkeadi 123
+++L ++ s+ lei + + as ++++++hs+ yi+ l+k ++ a+e ++ P + + f+ + l++Ga ++ ++ + +++
Si010171m 100 LDKLElsPKHRGSQVLEIQNFNPASLDDVARVHSKSYITGLEKAMSKAADEGL-----ILIEGTGPTYatETTFQESLLSAGAGITLVDSVVAA-SKL 191
333332245566788999999********************999888877655.....456677776511566666778899887766665543.333 PP
class-1.txt 124 ainwaGGl.......hhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekg 212
+ n G+ hha + Gfc +i +a ++ +krv+ id+d+hhG+g +afy ++ +s h+ g +PgtG++++vg+++g
Si010171m 192 GPNPPLGFalvrppgHHAVPRGPMGFCVFGNIAVAARYAQHqyGLKRVMIIDFDVHHGNGTSDAFYDDPDIFFLSTHQLGS--YPGTGKIDEVGQGDG 287
4343333222223339****************99998777633479***********************************..9************** PP
class-1.txt 213 kyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpl.....lvlGGGGYtlrn 300
++n+Pl g D ++ f + i + ++f+P+++++ G D+ a D+l+ ++++ ++ + +k+ +l + GGY+l+
Si010171m 288 EGTTLNLPLPGGAGDYAMRCAFDEAIAPSAQRFKPDIILVSAGYDAHALDPLAGLQFTTGTFYMLASSIKQLAKELcggrcIFFLEGGYNLQT 380
********************************************************9998877766666666444311111344456777665 PP
|
Protein Sequence
(Fasta) | MLPLLKHCCA FGTHHLLTWG SIFQTSGREQ KQIRSWSAQC SANYDRASVP EKDSPLKNLT 60
LPDNSLLDAR ILYCTSPALG HNKEAHPESN KRVPAIVDAL DKLELSPKHR GSQVLEIQNF 120
NPASLDDVAR VHSKSYITGL EKAMSKAADE GLILIEGTGP TYATETTFQE SLLSAGAGIT 180
LVDSVVAASK LGPNPPLGFA LVRPPGHHAV PRGPMGFCVF GNIAVAARYA QHQYGLKRVM 240
IIDFDVHHGN GTSDAFYDDP DIFFLSTHQL GSYPGTGKID EVGQGDGEGT TLNLPLPGGA 300
GDYAMRCAFD EAIAPSAQRF KPDIILVSAG YDAHALDPLA GLQFTTGTFY MLASSIKQLA 360
KELCGGRCIF FLEGGYNLQT LSSSVANTFR AFLDEPSLAA QLDDPAMLYE EPTRKIKEAI 420
AKAKGIHSL 429Protein Fasta Sequence
>Si010171m|Class-I|Setaria italica
MLPLLKHCCAFGTHHLLTWGSIFQTSGREQKQIRSWSAQCSANYDRASVPEKDSPLKNLTLPDNSLLDARILYCTSPALGHNKEAHPESNKRVPAIVDALDKLELSPKHRGSQVLEIQNFNPASLDDVARVHSKSYITGLEKAMSKAADEGLILIEGTGPTYATETTFQESLLSAGAGITLVDSVVAASKLGPNPPLGFALVRPPGHHAVPRGPMGFCVFGNIAVAARYAQHQYGLKRVMIIDFDVHHGNGTSDAFYDDPDIFFLSTHQLGSYPGTGKIDEVGQGDGEGTTLNLPLPGGAGDYAMRCAFDEAIAPSAQRFKPDIILVSAGYDAHALDPLAGLQFTTGTFYMLASSIKQLAKELCGGRCIFFLEGGYNLQTLSSSVANTFRAFLDEPSLAAQLDDPAMLYEEPTRKIKEAIAKAKGIHSL |
Nucleotide Sequence
(Fasta) | ATGTTGCCTC TGCTCAAACA TTGCTGTGCC TTTGGAACTC ATCATCTCTT AACCTGGGGG 60
AGCATCTTCC AAACATCAGG AAGAGAACAA AAACAAATCA GGAGTTGGAG CGCACAGTGC 120
TCGGCAAATT ATGACAGAGC TTCTGTACCA GAGAAAGACA GTCCTCTAAA GAATTTAACA 180
TTACCTGATA ATTCACTTCT TGATGCCCGT ATTCTCTATT GTACCTCTCC TGCCCTGGGT 240
CATAACAAAG AAGCACACCC AGAATCTAAC AAAAGAGTGC CTGCAATAGT TGATGCTCTT 300
GATAAATTGG AGCTTAGTCC CAAGCATCGT GGTTCACAGG TTCTTGAAAT TCAAAATTTC 360
AACCCTGCTT CTCTAGATGA TGTTGCACGA GTTCATTCCA AGTCTTACAT CACTGGACTT 420
GAAAAGGCTA TGAGTAAAGC TGCAGATGAA GGTCTGATAT TAATTGAAGG AACTGGACCA 480
ACATATGCTA CAGAGACTAC TTTCCAAGAA TCACTTCTAT CAGCTGGTGC TGGAATCACA 540
CTGGTTGATT CAGTGGTTGC CGCATCAAAG TTAGGTCCTA ATCCACCCCT TGGCTTTGCG 600
TTAGTAAGGC CACCAGGACA TCATGCTGTT CCTCGAGGTC CCATGGGCTT CTGTGTGTTT 660
GGGAACATTG CTGTGGCAGC TCGGTATGCT CAGCATCAAT ATGGACTAAA GCGGGTGATG 720
ATAATAGATT TTGACGTTCA CCATGGCAAT GGGACATCCG ATGCATTTTA TGATGATCCG 780
GACATCTTCT TCCTCTCAAC TCACCAGCTT GGAAGCTATC CTGGGACTGG TAAGATCGAC 840
GAAGTCGGTC AAGGTGATGG CGAAGGCACA ACGCTCAACC TGCCACTTCC TGGTGGCGCA 900
GGTGATTACG CAATGAGGTG TGCTTTTGAT GAGGCCATTG CTCCATCCGC CCAGAGATTC 960
AAGCCTGATA TCATCCTTGT TTCAGCCGGG TACGACGCGC ATGCACTGGA CCCCCTGGCC 1020
GGCCTGCAGT TCACCACGGG CACGTTCTAC ATGCTGGCAT CGAGCATCAA GCAGCTGGCA 1080
AAGGAGCTCT GCGGCGGCCG CTGCATCTTC TTCCTGGAGG GAGGGTACAA CCTGCAGACG 1140
CTGTCCAGCT CCGTCGCAAA CACGTTCCGT GCGTTCCTCG ACGAACCCAG CCTCGCGGCG 1200
CAGTTGGACG ACCCGGCGAT GCTTTACGAA GAGCCGACTC GGAAGATCAA AGAGGCGATT 1260
GCGAAGGCCA AGGGCATCCA TTCGCTTTGA
1291Nucleotide Fasta Sequence
>Si010171m|Class-I|Setaria italica
ATGTTGCCTCTGCTCAAACATTGCTGTGCCTTTGGAACTCATCATCTCTTAACCTGGGGGAGCATCTTCCAAACATCAGGAAGAGAACAAAAACAAATCAGGAGTTGGAGCGCACAGTGCTCGGCAAATTATGACAGAGCTTCTGTACCAGAGAAAGACAGTCCTCTAAAGAATTTAACATTACCTGATAATTCACTTCTTGATGCCCGTATTCTCTATTGTACCTCTCCTGCCCTGGGTCATAACAAAGAAGCACACCCAGAATCTAACAAAAGAGTGCCTGCAATAGTTGATGCTCTTGATAAATTGGAGCTTAGTCCCAAGCATCGTGGTTCACAGGTTCTTGAAATTCAAAATTTCAACCCTGCTTCTCTAGATGATGTTGCACGAGTTCATTCCAAGTCTTACATCACTGGACTTGAAAAGGCTATGAGTAAAGCTGCAGATGAAGGTCTGATATTAATTGAAGGAACTGGACCAACATATGCTACAGAGACTACTTTCCAAGAATCACTTCTATCAGCTGGTGCTGGAATCACACTGGTTGATTCAGTGGTTGCCGCATCAAAGTTAGGTCCTAATCCACCCCTTGGCTTTGCGTTAGTAAGGCCACCAGGACATCATGCTGTTCCTCGAGGTCCCATGGGCTTCTGTGTGTTTGGGAACATTGCTGTGGCAGCTCGGTATGCTCAGCATCAATATGGACTAAAGCGGGTGATGATAATAGATTTTGACGTTCACCATGGCAATGGGACATCCGATGCATTTTATGATGATCCGGACATCTTCTTCCTCTCAACTCACCAGCTTGGAAGCTATCCTGGGACTGGTAAGATCGACGAAGTCGGTCAAGGTGATGGCGAAGGCACAACGCTCAACCTGCCACTTCCTGGTGGCGCAGGTGATTACGCAATGAGGTGTGCTTTTGATGAGGCCATTGCTCCATCCGCCCAGAGATTCAAGCCTGATATCATCCTTGTTTCAGCCGGGTACGACGCGCATGCACTGGACCCCCTGGCCGGCCTGCAGTTCACCACGGGCACGTTCTACATGCTGGCATCGAGCATCAAGCAGCTGGCAAAGGAGCTCTGCGGCGGCCGCTGCATCTTCTTCCTGGAGGGAGGGTACAACCTGCAGACGCTGTCCAGCTCCGTCGCAAACACGTTCCGTGCGTTCCTCGACGAACCCAGCCTCGCGGCGCAGTTGGACGACCCGGCGATGCTTTACGAAGAGCCGACTCGGAAGATCAAAGAGGCGATTGCGAAGGCCAAGGGCATCCATTCGCTTTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
