| Tag |
Content |
| WERAM ID |
WERAM-Orb-0120 |
| Ensembl Protein ID |
OBART12G04910.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-II |
3.70e-91 |
306.7 |
91 |
408 |
| HDAC |
Class-I |
6.40e-27 |
96 |
98 |
371 |
|
| Organism |
Oryza barthii |
| Domain Profile |
HDAC Class-II
class-2.txt 14 qaleenkekhpEkpeRiqailsrlqeaglle.....kleelka.rkatkeelqlvHseehvelletaeklekeelesltvdsdsiylesksika 101
a+ +nke hpE+ +R+ ai+++l++ +l++ k++e++ + a++++++lvHs+++++ le+a++ + e + + ++ +y+++++++
OBART12G04910.1 91 PAMGHNKEAHPETNKRVPAIVDALEKLELTSkhrgsKVLEIQDfQPASLDDIALVHSRSYITGLEKAMSRASDEGLIFIEGTGPTYATQTTFQE 184
566789999********************99666666999988799*********************955555555599*************** PP
class-2.txt 102 arlavGavlelvdkvlkgelkn.....gfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkvly 190
l++Ga ++lvd+v++++ gfa+vRPPGHHa ++ +mGFC+f n+avaa+++q+++ +k+++i+D+DvHhGnGt ++fy+dp++++
OBART12G04910.1 185 CLLSAGAGITLVDSVVAASKLGpkpplGFALVRPPGHHAVPEGPMGFCVFGNIAVAARYAQNQHGLKRVMIIDFDVHHGNGTCDAFYDDPDIFF 278
***************999862245678******************************************************************* PP
class-2.txt 191 lSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatl 284
lS+H + gs +p g+g++++vg+g+geg+++N++++gg+ gd ++ af+ev+ p+a++FkPd++lvsaG+Da++ dpl+gl++t+ ++ +l
OBART12G04910.1 279 LSTH--QLGS-YP--GTGKIHQVGQGNGEGTTLNLPLPGGS-GDYAMRCAFDEVIAPAAQRFKPDIILVSAGYDAHALDPLAGLQFTTGTFYML 366
****..99**.78..8***********************99.**************************************************** PP
class-2.txt 285 tkqllkl....aggrvvlvlEGGynlkaiaeaveavvkaLlg 322
+ ++++ +ggr+v++lEGGynl++++++v+ +++a lg
OBART12G04910.1 367 AARIREVaaelCGGRCVFFLEGGYNLESLSSSVADTFRAFLG 408
99988776666*************************999875 PP
HDAC Class-I
class-1.txt 18 qkhpmkpkrlsltheLv......lnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvf..dglfeycq 103
+ hp +kr+ + + + ++ sk lei + as ++++ +hs yi+ l+k + ++e ++ P + + f+ c
OBART12G04910.1 98 EAHPETNKRVPAIVDALekleltSKHRGSKVLEIQDFQPASLDDIALVHSRSYITGLEKAMSRASDEGL-----IFIEGTGPTYatQTTFQECL 186
45555555554333222122222677778999*************************998776655443.....34777777651167888899 PP
class-1.txt 104 litGasle......aakkLnkkea.diainwaGGlhhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDgveeafyttdrvmtv 188
l++Ga ++ aa+kL k a+ hha + Gfc +i +a + +h krv+ id+d+hhG+g +afy ++ +
OBART12G04910.1 187 LSAGAGITlvdsvvAASKLGPKPPlGFALVRP-PGHHAVPEGPMGFCVFGNIAVAARYAQNQHglKRVMIIDFDVHHGNGTCDAFYDDPDIFFL 279
****9877111111444554443313444444.45*****************99998777654349**************************** PP
class-1.txt 189 sfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvk 282
s h+ g +PgtG++++vg+++g ++n+Pl g D ++ f +vi + ++f+P+++++ G D+ a D+l+ ++++ ++ ++
OBART12G04910.1 280 STHQLGS--YPGTGKIHQVGQGNGEGTTLNLPLPGGSGDYAMRCAFDEVIAPAAQRFKPDIILVSAGYDAHALDPLAGLQFTTGTFYMLAARIR 371
*******..9*******************************************************************99999876655554444 PP
|
Protein Sequence
(Fasta) | MEQLWVPSLP ILGGRILPML RHYCGFGSHH PLTWRSLQIT GRKQKHNGCW IAYCLPSDNG 60
TSISDTNGVR KDLALPDNLL RDARILYCTS PAMGHNKEAH PETNKRVPAI VDALEKLELT 120
SKHRGSKVLE IQDFQPASLD DIALVHSRSY ITGLEKAMSR ASDEGLIFIE GTGPTYATQT 180
TFQECLLSAG AGITLVDSVV AASKLGPKPP LGFALVRPPG HHAVPEGPMG FCVFGNIAVA 240
ARYAQNQHGL KRVMIIDFDV HHGNGTCDAF YDDPDIFFLS THQLGSYPGT GKIHQVGQGN 300
GEGTTLNLPL PGGSGDYAMR CAFDEVIAPA AQRFKPDIIL VSAGYDAHAL DPLAGLQFTT 360
GTFYMLAARI REVAAELCGG RCVFFLEGGY NLESLSSSVA DTFRAFLGEP SLAARFDDPA 420
MLYEEPTRKI REAIDKAKHL HSL 443Protein Fasta Sequence
>OBART12G04910.1|Class-I|Oryza barthii
MEQLWVPSLPILGGRILPMLRHYCGFGSHHPLTWRSLQITGRKQKHNGCWIAYCLPSDNGTSISDTNGVRKDLALPDNLLRDARILYCTSPAMGHNKEAHPETNKRVPAIVDALEKLELTSKHRGSKVLEIQDFQPASLDDIALVHSRSYITGLEKAMSRASDEGLIFIEGTGPTYATQTTFQECLLSAGAGITLVDSVVAASKLGPKPPLGFALVRPPGHHAVPEGPMGFCVFGNIAVAARYAQNQHGLKRVMIIDFDVHHGNGTCDAFYDDPDIFFLSTHQLGSYPGTGKIHQVGQGNGEGTTLNLPLPGGSGDYAMRCAFDEVIAPAAQRFKPDIILVSAGYDAHALDPLAGLQFTTGTFYMLAARIREVAAELCGGRCVFFLEGGYNLESLSSSVADTFRAFLGEPSLAARFDDPAMLYEEPTRKIREAIDKAKHLHSL |
Nucleotide Sequence
(Fasta) | AAAAAAAAAA AAAAAGAGGA AAAAATGCAG TTGTTAATTT GTTATCGCTA GAAAAGAACA 60
CGAGAAGATA GCGAAAGCTT GGGGTGAAAT CCTGTGGTGT TTCATGGACC AAGCTCCTCG 120
TTGAAGAGAT AATTTCCCTT GTTTTGTATT TTCTTTTTTC GATTAAGAGG AAAGAACGAA 180
GCAAGGAAGT GGTAGAGGAG AGGGGATTCA GTGAGGAAGG GAGAGAGATA GATACCTGGA 240
GGTTTGCAGG AGGGGATGGA ACAGCTGTGG GTGCCATCGC TTCCGATTCT TGGAGGAAGG 300
ATATTGCCTA TGCTCAGGCA CTACTGTGGC TTTGGAAGTC ATCATCCCTT AACCTGGAGA 360
AGCTTACAAA TTACTGGAAG AAAACAGAAG CATAATGGGT GTTGGATTGC ATACTGCTTA 420
CCAAGTGATA ATGGAACTTC TATTTCAGAC ACAAATGGTG TTCGAAAAGA CTTAGCTTTG 480
CCTGACAATT TGCTTCGTGA TGCTCGTATT CTCTATTGTA CGTCTCCTGC CATGGGTCAT 540
AACAAGGAAG CGCATCCAGA AACTAACAAA AGAGTTCCTG CAATAGTTGA TGCTCTCGAA 600
AAACTGGAGC TTACTTCGAA GCATCGTGGT TCAAAGGTTC TTGAAATTCA AGATTTCCAA 660
CCTGCTTCAC TTGATGATAT TGCACTAGTT CATTCAAGAT CATACATAAC TGGACTTGAA 720
AAGGCTATGA GTAGGGCTTC AGATGAAGGT TTGATATTCA TTGAAGGAAC TGGACCTACA 780
TATGCTACAC AGACTACTTT CCAAGAATGT CTCCTTTCTG CTGGTGCTGG AATTACATTG 840
GTTGACTCAG TGGTTGCAGC ATCAAAGTTG GGCCCGAAGC CACCGCTCGG CTTTGCCTTA 900
GTAAGGCCAC CAGGACATCA TGCTGTTCCT GAAGGTCCCA TGGGCTTCTG TGTCTTTGGG 960
AACATCGCAG TGGCAGCTCG GTATGCTCAG AATCAACATG GTTTAAAGCG GGTCATGATA 1020
ATAGATTTTG ATGTTCACCA CGGTAACGGC ACATGTGACG CCTTTTATGA TGATCCGGAC 1080
ATATTCTTCC TCTCAACTCA TCAGCTTGGA AGCTATCCTG GCACCGGTAA GATCCACCAA 1140
GTTGGCCAGG GCAACGGCGA GGGCACGACG CTCAACCTGC CACTACCCGG TGGCTCAGGC 1200
GATTACGCGA TGAGGTGCGC GTTTGATGAG GTTATTGCCC CAGCTGCCCA GCGGTTCAAA 1260
CCTGACATCA TCCTCGTTTC AGCCGGGTAC GACGCGCACG CGCTGGACCC GCTGGCGGGG 1320
CTGCAGTTCA CGACGGGGAC GTTCTACATG CTGGCGGCGA GGATCCGGGA GGTGGCGGCG 1380
GAGCTGTGCG GCGGGCGGTG CGTCTTCTTC CTGGAGGGCG GCTACAACCT GGAGTCGCTG 1440
TCCAGCTCAG TGGCCGACAC CTTCCGTGCG TTCCTCGGCG AGCCCAGCCT CGCCGCGCGG 1500
TTCGACGACC CGGCGATGCT CTACGAGGAG CCCACGCGGA AGATCAGGGA GGCCATCGAC 1560
AAGGCCAAGC ACCTCCACTC GCTCTAAGCG CGGCGCCCAG AAGATTGCAA CAGTATCTAT 1620
ACTTGGCTGC TGAAACTGCT TGCTGATGCT GGTCAACAAC TCAAGATCAT ATTCATGTCT 1680
TGTTAGCTTT TGCACTTTCC AGTGTAGCAT TGTACATCGG AAAAGCACGG CATAGTCATT 1740
TACATCTTAG TTGCTGTGAA TCAGATACAT TCGATCGCAA GCTTGTCAAT AGTTCAATAC 1800
CAGTTGTGTA GATTAATACC AGTACTACTG CGATTACTTG CATCTTTCTA CTCCAGTTAG 1860
TGTCCAGTGG AACCTGTCGA GCTATCAGCA TTTTGTTTTA TAATACAAAA GCTGACATTT 1920
TTTTCCCCAT ATTTATTAGT CACCTTAATT TGTATAACGT TTAGTCTAAA ATTGCATAAT 1980
ACAAAAAGGC CACACCTTTA GTATAAACCC AC
2013Nucleotide Fasta Sequence
>OBART12G04910.1|Class-I|Oryza barthii
AAAAAAAAAAAAAAAGAGGAAAAAATGCAGTTGTTAATTTGTTATCGCTAGAAAAGAACACGAGAAGATAGCGAAAGCTTGGGGTGAAATCCTGTGGTGTTTCATGGACCAAGCTCCTCGTTGAAGAGATAATTTCCCTTGTTTTGTATTTTCTTTTTTCGATTAAGAGGAAAGAACGAAGCAAGGAAGTGGTAGAGGAGAGGGGATTCAGTGAGGAAGGGAGAGAGATAGATACCTGGAGGTTTGCAGGAGGGGATGGAACAGCTGTGGGTGCCATCGCTTCCGATTCTTGGAGGAAGGATATTGCCTATGCTCAGGCACTACTGTGGCTTTGGAAGTCATCATCCCTTAACCTGGAGAAGCTTACAAATTACTGGAAGAAAACAGAAGCATAATGGGTGTTGGATTGCATACTGCTTACCAAGTGATAATGGAACTTCTATTTCAGACACAAATGGTGTTCGAAAAGACTTAGCTTTGCCTGACAATTTGCTTCGTGATGCTCGTATTCTCTATTGTACGTCTCCTGCCATGGGTCATAACAAGGAAGCGCATCCAGAAACTAACAAAAGAGTTCCTGCAATAGTTGATGCTCTCGAAAAACTGGAGCTTACTTCGAAGCATCGTGGTTCAAAGGTTCTTGAAATTCAAGATTTCCAACCTGCTTCACTTGATGATATTGCACTAGTTCATTCAAGATCATACATAACTGGACTTGAAAAGGCTATGAGTAGGGCTTCAGATGAAGGTTTGATATTCATTGAAGGAACTGGACCTACATATGCTACACAGACTACTTTCCAAGAATGTCTCCTTTCTGCTGGTGCTGGAATTACATTGGTTGACTCAGTGGTTGCAGCATCAAAGTTGGGCCCGAAGCCACCGCTCGGCTTTGCCTTAGTAAGGCCACCAGGACATCATGCTGTTCCTGAAGGTCCCATGGGCTTCTGTGTCTTTGGGAACATCGCAGTGGCAGCTCGGTATGCTCAGAATCAACATGGTTTAAAGCGGGTCATGATAATAGATTTTGATGTTCACCACGGTAACGGCACATGTGACGCCTTTTATGATGATCCGGACATATTCTTCCTCTCAACTCATCAGCTTGGAAGCTATCCTGGCACCGGTAAGATCCACCAAGTTGGCCAGGGCAACGGCGAGGGCACGACGCTCAACCTGCCACTACCCGGTGGCTCAGGCGATTACGCGATGAGGTGCGCGTTTGATGAGGTTATTGCCCCAGCTGCCCAGCGGTTCAAACCTGACATCATCCTCGTTTCAGCCGGGTACGACGCGCACGCGCTGGACCCGCTGGCGGGGCTGCAGTTCACGACGGGGACGTTCTACATGCTGGCGGCGAGGATCCGGGAGGTGGCGGCGGAGCTGTGCGGCGGGCGGTGCGTCTTCTTCCTGGAGGGCGGCTACAACCTGGAGTCGCTGTCCAGCTCAGTGGCCGACACCTTCCGTGCGTTCCTCGGCGAGCCCAGCCTCGCCGCGCGGTTCGACGACCCGGCGATGCTCTACGAGGAGCCCACGCGGAAGATCAGGGAGGCCATCGACAAGGCCAAGCACCTCCACTCGCTCTAAGCGCGGCGCCCAGAAGATTGCAACAGTATCTATACTTGGCTGCTGAAACTGCTTGCTGATGCTGGTCAACAACTCAAGATCATATTCATGTCTTGTTAGCTTTTGCACTTTCCAGTGTAGCATTGTACATCGGAAAAGCACGGCATAGTCATTTACATCTTAGTTGCTGTGAATCAGATACATTCGATCGCAAGCTTGTCAATAGTTCAATACCAGTTGTGTAGATTAATACCAGTACTACTGCGATTACTTGCATCTTTCTACTCCAGTTAGTGTCCAGTGGAACCTGTCGAGCTATCAGCATTTTGTTTTATAATACAAAAGCTGACATTTTTTTCCCCATATTTATTAGTCACCTTAATTTGTATAACGTTTAGTCTAAAATTGCATAATACAAAAAGGCCACACCTTTAGTATAAACCCAC
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
