WERAM Information

Tag Content
WERAM ID WERAM-Org-0113
Ensembl Protein ID ORGLA12G0047100.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ORGLA12G0047100 ORGLA12G0047100.1 ORGLA12G0047100.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 3.50e-91 306.4 91 408
HDAC Class-I 6.50e-27 95.6 98 371
Organism Oryza glaberrima
Domain Profile
  HDAC Class-II
        class-2.txt  14 qaleenkekhpEkpeRiqailsrlqeaglle.....kleelka.rkatkeelqlvHseehvelletaeklekeelesltvdsdsiylesksi 99 
                         a+ +nke hpE+ +R+ ai+++l++ +l++     +++e++  + a++++++lvHs+++++ le+a++  + e   + + ++ +y++++++
  ORGLA12G0047100.1  91 PAMGHNKEAHPETNKRVPAIVDALEKLELTSkhrgsQVLEIQDfQPASLDDIALVHSRSYITGLEKAMSRASDEGLIFIEGTGPTYATQTTF 182
                        567789999********************99555555888888799*********************955555555599************* PP
        class-2.txt 100 kaarlavGavlelvdkvlkgelkn.....gfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdp 186
                        +   l++Ga ++lvd+v++++        gfa+vRPPGHHa ++ +mGFC+f n+avaa+++q+++ +k+++i+D+DvHhGnGt ++fy+dp
  ORGLA12G0047100.1 183 QECLLSAGAGITLVDSVVAASKLGpkpplGFALVRPPGHHAVPEGPMGFCVFGNIAVAARYAQNQHGLKRVMIIDFDVHHGNGTCDAFYDDP 274
                        *****************999862245678*************************************************************** PP
        class-2.txt 187 kvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvta 278
                        ++++lS+H  + gs +p  g+g++++vg+g+geg+++N++++gg+ gd  ++ af+ev+ p+a++FkPd++lvsaG+Da++ dpl+gl++t+
  ORGLA12G0047100.1 275 DIFFLSTH--QLGS-YP--GTGKIHQVGQGNGEGTTLNLPLPGGS-GDYAMRCAFDEVIAPAAQRFKPDIILVSAGYDAHALDPLAGLQFTT 360
                        ********..99**.78..8***********************99.********************************************** PP
        class-2.txt 279 kcyatltkqllkl....aggrvvlvlEGGynlkaiaeaveavvkaLlg 322
                         ++ +l+  ++++    +ggr+v++lEGGynl++++++v+ +++a lg
  ORGLA12G0047100.1 361 GTFYMLAARIREVaaelCGGRCVFFLEGGYNLESLSSSVADTFRAFLG 408
                        ******99988776666*************************999875 PP
  HDAC Class-I
        class-1.txt  18 qkhpmkpkrlsltheLv......lnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvf..dglfey 101
                        + hp  +kr+  + + +       ++  s+ lei   + as ++++ +hs  yi+ l+k  +  ++e         ++   P +  +  f+ 
  ORGLA12G0047100.1  98 EAHPETNKRVPAIVDALekleltSKHRGSQVLEIQDFQPASLDDIALVHSRSYITGLEKAMSRASDEGL-----IFIEGTGPTYatQTTFQE 184
                        455555555543333221222226777788999999*********************998776655443.....347777776511678888 PP
        class-1.txt 102 cqlitGasle......aakkLnkkea.diainwaGGlhhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDgveeafyttdr 184
                        c l++Ga ++      aa+kL  k     a+      hha  +   Gfc   +i +a    + +h  krv+ id+d+hhG+g  +afy    
  ORGLA12G0047100.1 185 CLLSAGAGITlvdsvvAASKLGPKPPlGFALVRP-PGHHAVPEGPMGFCVFGNIAVAARYAQNQHglKRVMIIDFDVHHGNGTCDAFYDDPD 275
                        99****9877111111444554443313444444.45*****************99998777654349************************ PP
        class-1.txt 185 vmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae 276
                        ++ +s h+ g   +PgtG++++vg+++g   ++n+Pl  g  D  ++  f +vi +  ++f+P+++++  G D+ a D+l+  ++++ ++  
  ORGLA12G0047100.1 276 IFFLSTHQLGS--YPGTGKIHQVGQGNGEGTTLNLPLPGGSGDYAMRCAFDEVIAPAAQRFKPDIILVSAGYDAHALDPLAGLQFTTGTFYM 365
                        ***********..9*******************************************************************99999876655 PP
        class-1.txt 277 cvkfvk 282
                            ++
  ORGLA12G0047100.1 366 LAARIR 371
                        554444 PP
Protein Sequence
(Fasta)		MEQLWVPSLP ILGGRILPML RHYCGFGSHH PLTWRSLQIT GRKQKHNGCW IAYCLPSDNG 60
TSISDTNGVR KDLALPDNLL RDAHILYCTS PAMGHNKEAH PETNKRVPAI VDALEKLELT 120
SKHRGSQVLE IQDFQPASLD DIALVHSRSY ITGLEKAMSR ASDEGLIFIE GTGPTYATQT 180
TFQECLLSAG AGITLVDSVV AASKLGPKPP LGFALVRPPG HHAVPEGPMG FCVFGNIAVA 240
ARYAQNQHGL KRVMIIDFDV HHGNGTCDAF YDDPDIFFLS THQLGSYPGT GKIHQVGQGN 300
GEGTTLNLPL PGGSGDYAMR CAFDEVIAPA AQRFKPDIIL VSAGYDAHAL DPLAGLQFTT 360
GTFYMLAARI REVAAELCGG RCVFFLEGGY NLESLSSSVA DTFRAFLGEP SLAARFDDPA 420
MLYEEPTRKI REAIDKAKHL HSL 443
Nucleotide Sequence
(Fasta)		ATGGAACAGC TGTGGGTGCC ATCGCTTCCG ATTCTTGGAG GAAGGATATT GCCTATGCTC 60
AGGCACTACT GTGGCTTTGG AAGTCATCAT CCCTTAACCT GGAGAAGCTT ACAAATTACT 120
GGAAGAAAAC AGAAGCATAA TGGGTGTTGG ATTGCATACT GCTTACCAAG CGATAATGGA 180
ACTTCTATTT CAGACACAAA TGGTGTTCGA AAAGACTTAG CTTTGCCTGA CAATTTGCTT 240
CGTGATGCTC ATATTCTCTA TTGTACATCT CCTGCCATGG GTCATAACAA GGAAGCGCAT 300
CCAGAAACTA ACAAAAGAGT TCCTGCAATA GTTGATGCTC TCGAAAAACT GGAGCTTACT 360
TCGAAGCATC GTGGTTCACA GGTTCTTGAA ATTCAAGATT TCCAACCTGC TTCACTTGAT 420
GATATTGCAC TAGTTCATTC AAGATCATAC ATAACTGGAC TTGAAAAGGC TATGAGTAGG 480
GCTTCAGATG AAGGTTTGAT ATTCATTGAA GGAACTGGAC CTACATATGC TACCCAGACT 540
ACTTTCCAAG AATGTCTCCT TTCTGCTGGT GCTGGAATTA CATTGGTTGA TTCAGTGGTT 600
GCAGCATCAA AGTTGGGCCC GAAGCCACCG CTCGGCTTTG CCTTAGTAAG GCCACCAGGA 660
CATCATGCTG TTCCTGAAGG TCCCATGGGC TTCTGTGTCT TTGGGAACAT TGCAGTGGCA 720
GCTCGGTATG CTCAGAATCA ACATGGTTTA AAGCGGGTCA TGATAATAGA TTTTGATGTT 780
CACCACGGTA ACGGCACATG TGACGCCTTT TATGATGATC CGGACATATT CTTCCTCTCA 840
ACTCATCAGC TTGGAAGCTA TCCTGGCACC GGTAAGATCC ACCAAGTTGG CCAGGGCAAC 900
GGCGAGGGCA CGACGCTCAA CCTGCCACTA CCCGGTGGCT CAGGCGATTA CGCGATGAGG 960
TGCGCGTTTG ATGAGGTTAT TGCCCCAGCT GCCCAGCGGT TCAAACCTGA CATCATCCTC 1020
GTTTCAGCCG GGTACGACGC GCACGCGCTG GACCCGCTGG CGGGGCTGCA GTTCACGACG 1080
GGGACGTTCT ACATGCTGGC GGCGAGGATC CGGGAGGTGG CGGCGGAGCT GTGCGGCGGG 1140
CGGTGCGTCT TCTTCCTGGA GGGCGGCTAC AACCTGGAGT CGCTGTCCAG CTCAGTGGCC 1200
GACACCTTCC GTGCGTTCCT CGGCGAGCCC AGCCTCGCCG CGCGGTTCGA CGACCCGGCG 1260
ATGCTCTACG AGGAGCCCAC GCGGAAGATC AGGGAGGCCA TCGACAAGGC CAAGCACCTC 1320
CACTCGCTCT AA 1333
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ori-0128 BGIOSGA037104-PA Oryza indica 100 0.0 914
WERAM-Orni-0103 ONIVA09G16260.1 Oryza nivara 100 0.0 914
WERAM-Orb-0120 OBART12G04910.1 Oryza barthii 100 0.0 912
WERAM-Ors-0108 OS12T0182700-01 Oryza sativa 100 0.0 912
WERAM-Orgl-0115 OGLUM12G05720.1 Oryza glumaepatula 96 0.0 905
WERAM-Orp-0110 OPUNC12G04860.1 Oryza punctata 99 0.0 904
WERAM-Orl-0008 KN538685.1_FGP052 Oryza longistaminata 95 0.0 902
WERAM-Orr-0120 ORUFI12G05690.1 Oryza rufipogon 95 0.0 900
WERAM-Orm-0105 OMERI12G03370.1 Oryza meridionalis 92 0.0 894
WERAM-Lep-0114 LPERR12G04530.1 Leersia perrieri 93 0.0 849
WERAM-Orbr-0123 OB12G14780.1 Oryza brachyantha 90 0.0 831
WERAM-Brd-0117 BRADI4G40960.1 Brachypodium distachyon 84 0.0 785
WERAM-Tra-0186 Traes_5AS_78CA97493.2 Triticum aestivum 83 0.0 761
WERAM-Sei-0036 Si010171m Setaria italica 81 0.0 722
WERAM-Zem-0142 GRMZM2G456473_P01 Zea mays 81 0.0 719
WERAM-Sob-0054 Sb03g038950.1 Sorghum bicolor 82 0.0 716
WERAM-Tru-0036 TRIUR3_18154-P1 Triticum urartu 78 0.0 693
WERAM-Mua-0145 GSMUA_AchrUn_randomP00520_001 Musa acuminata 68 2e-180 629
WERAM-Viv-0021 VIT_04s0044g01510.t01 Vitis vinifera 75 2e-169 592
WERAM-Pot-0060 POPTR_0005s06520.1 Populus trichocarpa 71 1e-165 580
WERAM-Arl-0142 scaffold_700814.1 Arabidopsis lyrata 70 3e-161 565
WERAM-Art-0110 AT4G33470.1 Arabidopsis thaliana 68 2e-160 562
WERAM-Glm-0050 GLYMA05G32600.1 Glycine max 71 2e-159 559
WERAM-Brr-0061 Bra011444.1-P Brassica rapa 67 6e-159 557
WERAM-Bro-0004 Bo1g008110.1 Brassica oleracea 65 9e-159 557
WERAM-Met-0183 AET04758 Medicago truncatula 70 5e-158 555
WERAM-Prp-0071 EMJ12704 Prunus persica 73 7e-158 554
WERAM-Php-0127 PP1S85_154V6.1 Physcomitrella patens 65 4e-151 531
WERAM-Amt-0065 ERN18144 Amborella trichopoda 68 2e-150 529
WERAM-Sem-0047 EFJ16002 Selaginella moellendorffii 58 1e-125 447
WERAM-Sol-0006 Solyc01g009110.2.1 Solanum lycopersicum 76 2e-120 429
WERAM-Thc-0007 EOX92582 Theobroma cacao 77 3e-114 409
WERAM-Osl-0036 ABP01312 Ostreococcus lucimarinus 50 7e-95 345
WERAM-Chr-0006 EDP01653 Chlamydomonas reinhardtii 55 2e-54 210
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 36 3e-49 193
WERAM-Myl-0003 ENSMLUP00000000417.2 Myotis lucifugus 41 5e-48 189
WERAM-Dar-0023 ENSDARP00000124246.1 Danio rerio 36 6e-48 189
WERAM-Aim-0036 ENSAMEP00000002564.1 Ailuropoda melanoleuca 37 8e-48 188
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 35 1e-47 188
WERAM-Coi-0028 EAS30926 Coccidioides immitis 35 2e-47 187
WERAM-Mup-0023 ENSMPUP00000002307.1 Mustela putorius furo 37 3e-47 186
WERAM-Caf-0004 ENSCAFP00000000979.4 Canis familiaris 38 7e-47 185
WERAM-Tut-0141 ENSTTRP00000011664.1 Tursiops truncatus 38 7e-47 185
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 36 1e-46 185
WERAM-Cag-0018 CAG60803 Candida glabrata 34 1e-46 184
WERAM-Ict-0132 ENSSTOP00000013675.2 Ictidomys tridecemlineatus 35 2e-46 184
WERAM-Mum-0213 ENSMUSP00000080832.5 Mus musculus 36 2e-46 184
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 34 2e-46 184
WERAM-Cae-0060 F41H10.6b Caenorhabditis elegans 34 3e-46 183
WERAM-Fec-0119 ENSFCAP00000011049.3 Felis catus 38 3e-46 183
WERAM-Eqc-0086 ENSECAP00000010704.1 Equus caballus 37 4e-46 182
WERAM-Tar-0042 ENSTRUP00000010127.1 Takifugu rubripes 34 7e-46 182
WERAM-Bot-0106 ENSBTAP00000014602.4 Bos taurus 38 8e-46 182
WERAM-Cap-0164 ENSCPOP00000013386.2 Cavia porcellus 36 9e-46 182
WERAM-Ran-0209 ENSRNOP00000009295.5 Rattus norvegicus 35 2e-45 181
WERAM-Caa-0034 KGT64501 Candida albicans 33 2e-45 181
WERAM-Ere-0078 ENSEEUP00000006690.1 Erinaceus europaeus 38 2e-45 180
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 32 2e-45 180
WERAM-Paa-0009 ENSPANP00000013655.1 Papio anubis 36 2e-45 180
WERAM-Pug-0031 EFP89333 Puccinia graminis 34 3e-45 180
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 35 3e-45 180
WERAM-Gog-0159 ENSGGOP00000014095.2 Gorilla gorilla 34 3e-45 179
WERAM-Xim-0154 ENSXMAP00000012744.1 Xiphophorus maculatus 38 4e-45 179
WERAM-Otg-0149 ENSOGAP00000012689.2 Otolemur garnettii 36 4e-45 179
WERAM-Drm-0028 FBpp0290988 Drosophila melanogaster 35 6e-45 179
WERAM-Pat-0122 ENSPTRP00000025053.4 Pan troglodytes 35 7e-45 179
WERAM-Sus-0012 ENSSSCP00000001039.2 Sus scrofa 38 7e-45 178
WERAM-Chs-0051 ENSCSAP00000001305.1 Chlorocebus sabaeus 35 9e-45 178
WERAM-Hos-0058 ENSP00000216271.5 Homo sapiens 35 1e-44 178
WERAM-Pof-0022 ENSPFOP00000001799.2 Poecilia formosa 34 1e-44 177
WERAM-Trv-0041 EHK18675 Trichoderma virens 34 2e-44 177
WERAM-Orc-0102 ENSOCUP00000008741.3 Oryctolagus cuniculus 37 2e-44 177
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 34 3e-44 177
WERAM-Hov-0018 MLOC_16422.1 Hordeum vulgare 37 3e-44 176
WERAM-Nol-0005 ENSNLEP00000000692.2 Nomascus leucogenys 35 3e-44 176
WERAM-Mod-0081 ENSMODP00000012731.2 Monodelphis domestica 35 6e-44 176
WERAM-Gag-0014 GGTG_04308T0 Gaeumannomyces graminis 32 6e-44 175
WERAM-Gaa-0030 ENSGACP00000005071.1 Gasterosteus aculeatus 35 6e-44 175
WERAM-Kop-0012 CAY68916 Komagataella pastoris 33 6e-44 175
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 33 7e-44 175
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 35 7e-44 175
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 34 9e-44 175
WERAM-Fia-0119 ENSFALP00000010264.1 Ficedula albicollis 35 1e-43 174
WERAM-Ect-0100 ENSETEP00000011415.1 Echinops telfairi 39 1e-43 174
WERAM-Usm-0012 UM02102P0 Ustilago maydis 34 1e-43 174
WERAM-Mao-0002 MGG_01076T0 Magnaporthe oryzae 33 2e-43 174
WERAM-Orn-0102 ENSONIP00000011058.1 Oreochromis niloticus 35 2e-43 174
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 36 3e-43 173
WERAM-Aet-0088 EMT31322 Aegilops tauschii 39 3e-43 173
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 35 3e-43 173
WERAM-Ten-0061 ENSTNIP00000000291.1 Tetraodon nigroviridis 42 4e-43 173
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 36 4e-43 172
WERAM-Loa-0142 ENSLAFP00000012719.4 Loxodonta africana 35 6e-43 172
WERAM-Gam-0051 ENSGMOP00000005244.1 Gadus morhua 34 6e-43 172
WERAM-Map-0033 MAPG_10880T0 Magnaporthe poae 32 7e-43 172
WERAM-Pes-0141 ENSPSIP00000016742.1 Pelodiscus sinensis 37 7e-43 172
WERAM-Anc-0012 ENSACAP00000019114.1 Anolis carolinensis 37 9e-43 171
WERAM-Prc-0036 ENSPCAP00000003334.1 Procavia capensis 34 9e-43 171
WERAM-Gaga-0107 ENSGALP00000017619.4 Gallus gallus 36 1e-42 171
WERAM-Anp-0079 ENSAPLP00000009519.1 Anas platyrhynchos 36 2e-42 170
WERAM-Caj-0009 ENSCJAP00000001947.2 Callithrix jacchus 34 2e-42 170
WERAM-Trr-0039 EGR46026 Trichoderma reesei 33 2e-42 170
WERAM-Nec-0012 EFNCRP00000001681 Neurospora crassa 32 2e-42 170
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 36 2e-42 170
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 32 3e-42 170
WERAM-Mam-0095 ENSMMUP00000014626.2 Macaca mulatta 34 3e-42 170
WERAM-Poa-0162 ENSPPYP00000019901.2 Pongo abelii 34 3e-42 170
WERAM-Leo-0108 ENSLOCP00000014009.1 Lepisosteus oculatus 34 4e-42 169
WERAM-Chg-0033 EAQ86725 Chaetomium globosum 32 4e-42 169
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 34 4e-42 169
WERAM-Xet-0171 ENSXETP00000064083.1 Xenopus tropicalis 33 4e-42 169
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 34 5e-42 169
WERAM-Asg-0010 AAS51704 Ashbya gossypii 33 6e-42 169
WERAM-Mae-0029 ENSMEUP00000002095.1 Macropus eugenii 35 6e-42 169
WERAM-Aso-0015 CADAORAP00001816 Aspergillus oryzae 34 1e-41 168
WERAM-Orla-0013 ENSORLP00000001341.1 Oryzias latipes 41 1e-41 167
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 31 1e-41 167
WERAM-Sah-0095 ENSSHAP00000011018.1 Sarcophilus harrisii 34 2e-41 167
WERAM-Meg-0084 ENSMGAP00000008226.2 Meleagris gallopavo 37 2e-41 167
WERAM-Tum-0026 CAZ84932 Tuber melanosporum 33 2e-41 167
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 31 2e-41 167
WERAM-Put-0014 PTTG_07163P0 Puccinia triticina 32 3e-41 166
WERAM-Yal-0023 CAG79971 Yarrowia lipolytica 34 5e-41 166
WERAM-Ved-0005 EGY17208 Verticillium dahliae 30 6e-41 166
Created Date 25-Jun-2016