WERAM Information

Tag Content
WERAM ID WERAM-Php-0127
Ensembl Protein ID PP1S85_154V6.1
Gene Name HDA1509 PHYPADRAFT_130902
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PP1S85_154V6 PP1S85_154V6.1 PP1S85_154V6.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.50e-93 314.4 111 424
HDAC Class-I 3.70e-30 106.5 111 391
Organism Physcomitrella patens
Domain Profile
  HDAC Class-II
     class-2.txt  18 enkekhpEkpeRiqailsrlqeaglle.....kleelka.rkatkeelqlvHseehvelletaeklekeelesltvdsdsiylesksikaarlav 106
                     + +e hpE+ eR+ +il++l++ +l++     +++++++ ++a++e++++vHs  +v+ le+a+++ + e   +  +s+ +y++s++++ + la+
  PP1S85_154V6.1 111 HYQEGHPESNERVPSILEALERGKLTPefrgnEVLRIQNfKAASQEDVAAVHSLGYVKGLERAMQKAEDEGLIFLDNSGPTYATSSTYHDSMLAA 205
                     55677*********************9776666999999788999******************955555555599******************** PP
     class-2.txt 107 Gavlelvdkvlkgelkn.....gfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkvlylSlHRy 196
                     Ga l lvd+v++++ ++     gfa+vRPPGHHa ++ +mGFC+f n+avaa+++qq + +++++i+D+DvHhGnGt+++fy+d+++ +lS+H  
  PP1S85_154V6.1 206 GASLALVDSVVAASKETqnppvGFALVRPPGHHAVPAGPMGFCVFGNIAVAARYAQQAHGLQRVFIIDYDVHHGNGTNDAFYDDSDIYFLSTH-- 298
                     **********998764445999***********************************************************************.. PP
     class-2.txt 197 dkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatltkqllkl 291
                     ++gs +p  g+g+++evg g+geg ++N++++gg+ gd  +  +f+ev+ p+a++FkPd++lvsaGfDa+ +dpl+g+++t+ +y +l+ ++++l
  PP1S85_154V6.1 299 QDGS-YP--GTGKMSEVGAGSGEGATLNLPLPGGS-GDDTMARVFEEVIAPAAQRFKPDIILVSAGFDAHVQDPLAGMQFTTGTYYRLASDIKSL 389
                     9***.78..8***********************99.*******************************************************9999 PP
     class-2.txt 292 ....aggrvvlvlEGGynlkaiaeaveavvkaLlg 322
                         +ggr+v++lEGGy+lk+++++v+ +++a lg
  PP1S85_154V6.1 390 aqslCGGRCVFFLEGGYDLKSLSNSVADSFRAFLG 424
                     8888************************9999875 PP
  HDAC Class-I
     class-1.txt  13 eyhygqkhpmkpkrlsltheLv......lnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfd..glf 99 
                     +  y+++hp  ++r+  + e +       ++  ++ l+i + k as+e+++ +hs  y++ l++  ++ ++e         +++  P +     +
  PP1S85_154V6.1 111 H--YQEGHPESNERVPSILEALergkltPEFRGNEVLRIQNFKAASQEDVAAVHSLGYVKGLERAMQKAEDEGL-----IFLDNSGPTYAtsSTY 198
                     4..4455565555554333222233322788889999**************************99887776554.....4578888876511566 PP
     class-1.txt 100 eycqlitGasleaakkLnkkead...iainwa...GGlhhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDgveeafyttdrvm 186
                     + + l +Gasl+ ++ +   +++     + +a      hha      Gfc   +i +a    ++ h  +rv  id d+hhG+g ++afy  + + 
  PP1S85_154V6.1 199 HDSMLAAGASLALVDSVVAASKEtqnPPVGFAlvrPPGHHAVPAGPMGFCVFGNIAVAARYAQQAHglQRVFIIDYDVHHGNGTNDAFYDDSDIY 293
                     667899****9998887654444111334443111345*******************998887754349************************** PP
     class-1.txt 187 tvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfv 281
                      +s h+ g   +PgtG++s+vga++g   ++n+Pl  g  D+++ ++f++vi +  ++f+P+++++  G D+  +D+l+  ++++ ++ +  + +
  PP1S85_154V6.1 294 FLSTHQDGS--YPGTGKMSEVGAGSGEGATLNLPLPGGSGDDTMARVFEEVIAPAAQRFKPDIILVSAGFDAHVQDPLAGMQFTTGTYYRLASDI 386
                     *****9998..9**********************************************************************9998888877777 PP
     class-1.txt 282 ksfnl 286
                     ks   
  PP1S85_154V6.1 387 KSLAQ 391
                     77654 PP
Protein Sequence
(Fasta)		MRERAAAAMA MASSASVLAR DSCFYRVVSF GRNRISARGV YGKEKEFGSN GVHEVEFPRQ 60
FFRSERPSAI TCVADSQAST SISRQPRELL VPIPQLVEAR VIFAAAPALG HYQEGHPESN 120
ERVPSILEAL ERGKLTPEFR GNEVLRIQNF KAASQEDVAA VHSLGYVKGL ERAMQKAEDE 180
GLIFLDNSGP TYATSSTYHD SMLAAGASLA LVDSVVAASK ETQNPPVGFA LVRPPGHHAV 240
PAGPMGFCVF GNIAVAARYA QQAHGLQRVF IIDYDVHHGN GTNDAFYDDS DIYFLSTHQD 300
GSYPGTGKMS EVGAGSGEGA TLNLPLPGGS GDDTMARVFE EVIAPAAQRF KPDIILVSAG 360
FDAHVQDPLA GMQFTTGTYY RLASDIKSLA QSLCGGRCVF FLEGGYDLKS LSNSVADSFR 420
AFLGDKSLSS RLDNPAVLYD EPSLYARQAI DEIKSIHSL 459
Nucleotide Sequence
(Fasta)		GATTTGAACA TGCGGGAAAG AGCAGCGGCA GCCATGGCCA TGGCGTCCTC GGCGTCGGTA 60
CTTGCACGGG ATTCTTGCTT CTACCGTGTT GTATCTTTCG GCAGAAACAG GATCTCAGCG 120
CGTGGTGTAT ATGGCAAAGA AAAAGAATTC GGTTCAAATG GCGTGCATGA GGTAGAATTT 180
CCACGTCAAT TTTTTCGAAG TGAGCGTCCA TCAGCAATTA CCTGCGTTGC GGACAGTCAA 240
GCTTCCACAT CTATTAGCAG GCAGCCCCGA GAGCTCCTTG TACCTATTCC TCAGCTTGTT 300
GAGGCTCGAG TAATTTTTGC TGCTGCACCG GCCTTGGGTC ATTACCAGGA AGGGCATCCC 360
GAATCTAACG AAAGAGTGCC TTCCATTCTT GAAGCTCTGG AAAGGGGGAA ACTGACACCT 420
GAGTTTCGTG GCAACGAGGT TTTAAGGATT CAGAATTTCA AAGCAGCATC ACAGGAGGAT 480
GTAGCTGCGG TTCACTCTCT GGGTTATGTT AAGGGACTGG AAAGGGCAAT GCAAAAGGCA 540
GAAGACGAAG GCCTTATATT TCTAGATAAC TCAGGACCTA CGTACGCGAC ATCGTCTACT 600
TATCATGATT CTATGCTGGC GGCAGGTGCA AGCTTAGCGC TGGTGGATTC TGTGGTGGCA 660
GCATCAAAGG AGACCCAGAA TCCTCCCGTC GGTTTCGCTC TTGTGCGACC TCCAGGTCAT 720
CATGCAGTTC CTGCGGGGCC GATGGGCTTC TGTGTGTTTG GGAATATTGC CGTGGCTGCT 780
CGCTATGCAC AACAAGCACA CGGGTTGCAG CGTGTTTTCA TTATTGATTA TGATGTTCAT 840
CATGGCAATG GGACTAATGA CGCCTTCTAC GACGACTCCG ACATATATTT CCTCTCCACA 900
CACCAGGATG GTAGTTATCC AGGGACTGGG AAGATGAGTG AAGTTGGTGC TGGCTCTGGA 960
GAAGGGGCAA CTCTTAATCT GCCTTTGCCA GGGGGTTCGG GAGATGACAC AATGGCACGT 1020
GTATTTGAAG AAGTAATTGC GCCTGCTGCT CAACGTTTCA AACCTGATAT CATTCTGGTG 1080
TCTGCTGGGT TTGATGCACA CGTCCAAGAT CCCTTGGCAG GGATGCAGTT CACAACGGGA 1140
ACGTATTATC GACTTGCATC TGATATCAAG AGTTTGGCGC AAAGTCTTTG TGGAGGCCGG 1200
TGTGTTTTTT TCCTCGAGGG AGGATATGAC CTCAAATCTT TGTCAAACAG TGTTGCAGAT 1260
TCATTCCGAG CTTTTCTTGG AGACAAGAGC TTGTCAAGCA GGCTTGATAA TCCAGCTGTT 1320
TTGTATGATG AACCCAGCTT GTATGCAAGG CAAGCAATTG ATGAGATCAA ATCCATCCAT 1380
TCACTGTAAA ATTAAAATCT CGACTCTAGA TAGATTCGAA GTATTTCGAG AAAGCTTATG 1440
GACACGTGAT AACATGAATG CGCTCTATTC CCATGAATAC ATAACAGATC TTCACTGGAG 1500
GATGTA 1507
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Viv-0021 VIT_04s0044g01510.t01 Vitis vinifera 62 8e-152 534
WERAM-Pot-0060 POPTR_0005s06520.1 Populus trichocarpa 66 3e-150 529
WERAM-Arl-0142 scaffold_700814.1 Arabidopsis lyrata 65 2e-148 522
WERAM-Art-0110 AT4G33470.1 Arabidopsis thaliana 63 3e-148 522
WERAM-Sob-0054 Sb03g038950.1 Sorghum bicolor 63 5e-147 518
WERAM-Bro-0004 Bo1g008110.1 Brassica oleracea 64 1e-146 516
WERAM-Brr-0061 Bra011444.1-P Brassica rapa 67 2e-146 516
WERAM-Met-0183 AET04758 Medicago truncatula 69 4e-146 515
WERAM-Orbr-0123 OB12G14780.1 Oryza brachyantha 68 6e-146 514
WERAM-Tra-0217 Traes_5BS_F36388166.1 Triticum aestivum 62 2e-145 513
WERAM-Mua-0145 GSMUA_AchrUn_randomP00520_001 Musa acuminata 67 2e-145 512
WERAM-Brd-0117 BRADI4G40960.1 Brachypodium distachyon 67 3e-145 512
WERAM-Zem-0142 GRMZM2G456473_P01 Zea mays 62 4e-145 512
WERAM-Glm-0050 GLYMA05G32600.1 Glycine max 64 7e-145 511
WERAM-Sei-0036 Si010171m Setaria italica 67 2e-143 506
WERAM-Prp-0071 EMJ12704 Prunus persica 70 3e-143 505
WERAM-Orp-0110 OPUNC12G04860.1 Oryza punctata 66 5e-143 504
WERAM-Orb-0120 OBART12G04910.1 Oryza barthii 66 7e-143 504
WERAM-Lep-0114 LPERR12G04530.1 Leersia perrieri 63 7e-143 504
WERAM-Orni-0103 ONIVA09G16260.1 Oryza nivara 65 2e-142 503
WERAM-Org-0113 ORGLA12G0047100.1 Oryza glaberrima 65 3e-142 502
WERAM-Ori-0128 BGIOSGA037104-PA Oryza indica 65 4e-142 502
WERAM-Ors-0108 OS12T0182700-01 Oryza sativa 65 6e-142 501
WERAM-Orl-0008 KN538685.1_FGP052 Oryza longistaminata 62 7e-139 491
WERAM-Orgl-0115 OGLUM12G05720.1 Oryza glumaepatula 63 1e-138 490
WERAM-Orr-0120 ORUFI12G05690.1 Oryza rufipogon 62 2e-138 489
WERAM-Orm-0105 OMERI12G03370.1 Oryza meridionalis 60 6e-137 484
WERAM-Amt-0065 ERN18144 Amborella trichopoda 65 5e-133 471
WERAM-Tru-0036 TRIUR3_18154-P1 Triticum urartu 59 5e-129 458
WERAM-Sem-0047 EFJ16002 Selaginella moellendorffii 62 2e-122 436
WERAM-Thc-0007 EOX92582 Theobroma cacao 75 4e-110 395
WERAM-Sol-0006 Solyc01g009110.2.1 Solanum lycopersicum 74 3e-108 389
WERAM-Osl-0036 ABP01312 Ostreococcus lucimarinus 52 3e-97 353
WERAM-Chr-0006 EDP01653 Chlamydomonas reinhardtii 57 4e-57 219
WERAM-Cae-0060 F41H10.6b Caenorhabditis elegans 38 4e-47 186
WERAM-Orla-0013 ENSORLP00000001341.1 Oryzias latipes 40 9e-46 181
WERAM-Dar-0170 ENSDARP00000100072.2 Danio rerio 41 1e-45 181
WERAM-Gaa-0079 ENSGACP00000010554.1 Gasterosteus aculeatus 41 1e-45 181
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 35 3e-45 180
WERAM-Ten-0099 ENSTNIP00000000138.1 Tetraodon nigroviridis 42 4e-45 179
WERAM-Tar-0145 ENSTRUP00000031264.1 Takifugu rubripes 40 5e-45 179
WERAM-Orn-0108 ENSONIP00000011544.1 Oreochromis niloticus 40 9e-45 178
WERAM-Xim-0050 ENSXMAP00000004607.1 Xiphophorus maculatus 40 1e-44 178
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 36 1e-44 178
WERAM-Pof-0029 ENSPFOP00000001978.1 Poecilia formosa 35 2e-44 177
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 40 3e-44 177
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 40 4e-44 176
WERAM-Anp-0061 ENSAPLP00000006782.1 Anas platyrhynchos 44 5e-44 176
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 40 6e-44 176
WERAM-Xet-0027 ENSXETP00000007313.3 Xenopus tropicalis 41 6e-44 176
WERAM-Meg-0108 ENSMGAP00000010913.2 Meleagris gallopavo 44 7e-44 175
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 41 7e-44 175
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 41 1e-43 175
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 41 1e-43 174
WERAM-Gaga-0067 ENSGALP00000010190.4 Gallus gallus 44 1e-43 174
WERAM-Caf-0004 ENSCAFP00000000979.4 Canis familiaris 39 1e-43 174
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 40 2e-43 174
WERAM-Ocp-0153 ENSOPRP00000015747.2 Ochotona princeps 41 2e-43 173
WERAM-Mup-0023 ENSMPUP00000002307.1 Mustela putorius furo 38 3e-43 173
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 40 3e-43 173
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 40 3e-43 173
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 34 3e-43 173
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 40 3e-43 173
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 41 4e-43 173
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 40 4e-43 173
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 39 4e-43 173
WERAM-Leo-0130 ENSLOCP00000016135.1 Lepisosteus oculatus 43 6e-43 172
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 40 6e-43 172
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 40 7e-43 172
WERAM-Prc-0036 ENSPCAP00000003334.1 Procavia capensis 33 7e-43 172
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 40 8e-43 172
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 40 8e-43 172
WERAM-Hov-0018 MLOC_16422.1 Hordeum vulgare 36 9e-43 171
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 42 9e-43 171
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 42 1e-42 171
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 40 1e-42 171
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 40 1e-42 171
WERAM-Cag-0018 CAG60803 Candida glabrata 33 1e-42 171
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 40 1e-42 171
WERAM-Orc-0142 ENSOCUP00000012429.3 Oryctolagus cuniculus 40 2e-42 171
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 40 2e-42 171
WERAM-Mae-0085 ENSMEUP00000008564.1 Macropus eugenii 39 3e-42 170
WERAM-Ptv-0096 ENSPVAP00000008849.1 Pteropus vampyrus 40 3e-42 170
WERAM-Aet-0088 EMT31322 Aegilops tauschii 44 4e-42 169
WERAM-Kop-0012 CAY68916 Komagataella pastoris 33 5e-42 169
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 39 5e-42 169
WERAM-Caj-0009 ENSCJAP00000001947.2 Callithrix jacchus 39 6e-42 169
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 43 6e-42 169
WERAM-Pug-0031 EFP89333 Puccinia graminis 33 6e-42 169
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 43 7e-42 169
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 39 7e-42 169
WERAM-Mam-0095 ENSMMUP00000014626.2 Macaca mulatta 39 8e-42 169
WERAM-Eqc-0086 ENSECAP00000010704.1 Equus caballus 36 8e-42 168
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 35 8e-42 168
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 40 8e-42 168
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 39 8e-42 168
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 39 9e-42 168
WERAM-Poa-0162 ENSPPYP00000019901.2 Pongo abelii 39 9e-42 168
WERAM-Caa-0034 KGT64501 Candida albicans 33 2e-41 167
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 32 2e-41 167
WERAM-Ova-0207 ENSOARP00000020819.1 Ovis aries 39 2e-41 167
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 39 4e-41 166
WERAM-Coi-0028 EAS30926 Coccidioides immitis 33 6e-41 166
WERAM-Gog-0184 ENSGGOP00000016066.2 Gorilla gorilla 38 6e-41 166
Created Date 25-Jun-2016