| Tag |
Content |
| WERAM ID |
WERAM-Brd-0117 |
| Ensembl Protein ID |
BRADI4G40960.1 |
| Gene Name |
BRADI4G40960.1 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-II |
2.10e-91 |
307.1 |
93 |
408 |
| HDAC |
Class-I |
7.00e-26 |
92.1 |
99 |
375 |
|
| Organism |
Brachypodium distachyon |
| Domain Profile |
HDAC Class-II
class-2.txt 15 aleenkekhpEkpeRiqailsrlqeaglle.....kleelka.rkatkeelqlvHseehvelletaeklekeelesltvdsdsiylesksikaar 103
a+ +nke+hpE+ +R+ ai+++l++ +l++ +++e+++ + a++++++ vHs+++++ le+a++ + e + + ++ +y+++++++ +
BRADI4G40960.1 93 AMGHNKESHPESNKRVPAIVDALEKLELTPkhrgsQVLEIQNfHPASLDDVARVHSRKYITGLEKAMSRASDEGLIFIEGTGPTYATQTTFQESL 187
6778999**********************9666655999998789*********************955555555599***************** PP
class-2.txt 104 lavGavlelvdkvlkgelkn.....gfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkvlylSl 193
la+Ga ++lvd+v++++ gfa+vRPPGHHa ++ +mGFC+f n+avaa+++q+++ +k+++i+D+DvHhGnGt ++fy+dp++++lS+
BRADI4G40960.1 188 LAAGAGITLVDSVVAASKLGpspplGFALVRPPGHHAVPEGPMGFCVFGNIAVAARYAQHQHGLKRVMIIDFDVHHGNGTCDAFYDDPDIFFLST 282
*************999863356677********************************************************************** PP
class-2.txt 194 HRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatltkql 288
H + gs +p g+g+++ +g+g++eg+++N++++gg+ gd ++ af+ev+ p a++FkPd++lvsaG+Da++ dpl+gl++t+ +y tl+ ++
BRADI4G40960.1 283 H--QLGS-YP--GTGKMNLIGQGSSEGTTLNLPLPGGS-GDYSMRCAFDEVIAPSAQRFKPDIILVSAGYDAHALDPLAGLQFTTGTYYTLASSI 371
*..99**.78..8***********************99.*******************************************************9 PP
class-2.txt 289 lkl....aggrvvlvlEGGynlkaiaeaveavvkaLl 321
++l +ggr+v++lEGGynl++++++v+ +++a l
BRADI4G40960.1 372 KQLagdlCGGRCVFFLEGGYNLQSLSSSVADTFRAFL 408
9999999************************999986 PP
HDAC Class-I
class-1.txt 18 qkhpmkpkrlsltheLv......lnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdg..lfeycql 104
++hp +kr+ + + + ++ s+ lei + + as ++++++hs +yi+ l+k + ++e ++ P + f+ + l
BRADI4G40960.1 99 ESHPESNKRVPAIVDALekleltPKHRGSQVLEIQNFHPASLDDVARVHSRKYITGLEKAMSRASDEGL-----IFIEGTGPTYATqtTFQESLL 188
555555555544333331222225566678899999*********************998776665443.....346777776654005555667 PP
class-1.txt 105 itGasleaakkLnkkead.......iainwaGGlhhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDgveeafyttdrvmtvsf 190
+Ga ++ ++ + ++ a+ hha + Gfc +i +a +++h krv+ id+d+hhG+g +afy ++ +s
BRADI4G40960.1 189 AAGAGITLVDSVVAASKLgpspplgFALVRP-PGHHAVPEGPMGFCVFGNIAVAARYAQHQHglKRVMIIDFDVHHGNGTCDAFYDDPDIFFLST 282
8888776655554443321111111444444.449****************99998777654349****************************** PP
class-1.txt 191 hkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfn 285
h+ g +PgtG+++ +g++++ ++n+Pl g D s++ f +vi + ++f+P+++++ G D+ a D+l+ ++++ ++ + + +k+
BRADI4G40960.1 283 HQLGS--YPGTGKMNLIGQGSSEGTTLNLPLPGGSGDYSMRCAFDEVIAPSAQRFKPDIILVSAGYDAHALDPLAGLQFTTGTYYTLASSIKQLA 375
*****..9*********************************************************************999988877777777664 PP
|
Protein Sequence
(Fasta) | MMERLWIPSH QTLGGRMLPF LRHYCVFGSH HPLTWSGLQT TERKHNQNGG WIAQCAASGN 60
GPSVSDINGA QKDFALPDSL LCNARILYCA SPAMGHNKES HPESNKRVPA IVDALEKLEL 120
TPKHRGSQVL EIQNFHPASL DDVARVHSRK YITGLEKAMS RASDEGLIFI EGTGPTYATQ 180
TTFQESLLAA GAGITLVDSV VAASKLGPSP PLGFALVRPP GHHAVPEGPM GFCVFGNIAV 240
AARYAQHQHG LKRVMIIDFD VHHGNGTCDA FYDDPDIFFL STHQLGSYPG TGKMNLIGQG 300
SSEGTTLNLP LPGGSGDYSM RCAFDEVIAP SAQRFKPDII LVSAGYDAHA LDPLAGLQFT 360
TGTYYTLASS IKQLAGDLCG GRCVFFLEGG YNLQSLSSSV ADTFRAFLDE PSLAAQFDNP 420
AMLYEEPTRR VKEAIEKVRH LHSL 444Protein Fasta Sequence
>BRADI4G40960.1|Class-I|Brachypodium distachyon
MMERLWIPSHQTLGGRMLPFLRHYCVFGSHHPLTWSGLQTTERKHNQNGGWIAQCAASGNGPSVSDINGAQKDFALPDSLLCNARILYCASPAMGHNKESHPESNKRVPAIVDALEKLELTPKHRGSQVLEIQNFHPASLDDVARVHSRKYITGLEKAMSRASDEGLIFIEGTGPTYATQTTFQESLLAAGAGITLVDSVVAASKLGPSPPLGFALVRPPGHHAVPEGPMGFCVFGNIAVAARYAQHQHGLKRVMIIDFDVHHGNGTCDAFYDDPDIFFLSTHQLGSYPGTGKMNLIGQGSSEGTTLNLPLPGGSGDYSMRCAFDEVIAPSAQRFKPDIILVSAGYDAHALDPLAGLQFTTGTYYTLASSIKQLAGDLCGGRCVFFLEGGYNLQSLSSSVADTFRAFLDEPSLAAQFDNPAMLYEEPTRRVKEAIEKVRHLHSL |
Nucleotide Sequence
(Fasta) | GTGGTATTAC GGCTTCTCTT GTTCAGGGGA GGATAAGAGG AGAGGGCGAG GGAGAGGTCT 60
CGAGAACTCT GTGGCAGATG ATGGAGCGGC TTTGGATACC ATCCCATCAG ACTCTTGGAG 120
GTAGAATGTT GCCTTTTCTC AGACACTACT GTGTCTTTGG AAGTCATCAT CCCTTAACCT 180
GGAGCGGCTT ACAAACCACT GAGAGAAAAC ATAACCAAAA TGGAGGCTGG ATTGCACAGT 240
GCGCGGCAAG TGGCAATGGA CCTTCTGTTT CAGACATAAA TGGTGCTCAA AAGGATTTTG 300
CTTTGCCAGA TAGTTTGCTT TGCAATGCTC GTATTCTCTA TTGTGCATCT CCTGCCATGG 360
GTCACAACAA GGAATCGCAT CCAGAATCTA ACAAAAGAGT GCCGGCAATA GTCGATGCTC 420
TCGAAAAATT GGAGCTTACG CCCAAGCATC GTGGATCACA GGTTCTTGAA ATTCAAAATT 480
TCCACCCTGC TTCACTTGAT GATGTTGCAC GAGTTCATTC AAGAAAATAC ATTACTGGAC 540
TCGAAAAGGC TATGAGTAGG GCTTCAGATG AAGGTTTGAT ATTCATTGAA GGAACTGGAC 600
CAACATATGC TACACAGACT ACCTTCCAAG AATCACTTCT TGCAGCTGGT GCTGGAATTA 660
CATTGGTTGA TTCAGTGGTT GCAGCATCAA AGCTGGGCCC AAGCCCACCC CTTGGATTTG 720
CGCTAGTAAG GCCACCAGGA CACCATGCGG TTCCTGAAGG TCCCATGGGC TTTTGCGTCT 780
TTGGGAACAT TGCAGTGGCA GCTCGGTACG CCCAGCATCA ACATGGATTA AAGCGGGTCA 840
TGATAATAGA TTTCGATGTT CACCATGGCA ATGGAACATG TGATGCCTTT TATGATGACC 900
CAGACATCTT CTTCCTCTCA ACCCATCAGC TAGGAAGCTA TCCTGGCACC GGTAAGATGA 960
ACCTAATTGG TCAAGGCAGC AGCGAAGGAA CAACGCTCAA CCTGCCACTG CCTGGTGGCT 1020
CAGGTGATTA CTCAATGAGG TGTGCATTTG ATGAGGTGAT TGCTCCATCA GCACAGCGAT 1080
TCAAGCCTGA CATCATCCTG GTTTCAGCTG GCTACGACGC GCATGCGCTG GACCCGCTAG 1140
CGGGGCTGCA GTTCACGACG GGCACGTACT ACACGCTGGC GTCGAGCATC AAGCAGCTGG 1200
CCGGGGATCT CTGCGGTGGC CGCTGCGTCT TCTTCCTGGA AGGCGGCTAC AACCTGCAGT 1260
CTCTCTCCAG CTCCGTCGCA GACACCTTCC GCGCGTTCCT CGACGAGCCC AGCCTCGCCG 1320
CGCAGTTCGA CAACCCGGCG ATGCTCTACG AGGAGCCAAC GCGGAGGGTG AAGGAGGCGA 1380
TCGAGAAGGT CAGGCATCTC CACTCGCTGT AGATTACACA CCGGAGATGA GCTCAGGCAC 1440
ACTGCTGCTT TGCAGTGTGC GCGCTGCAGA GTCAGATTGT GTGCTGCGTT TGCAGGTGTA 1500
GCGTGTGTGT ATGTGTGTGT ATAAACTGTA TGTATTTTGA AGATCTGCTC GCTGCTCATT 1560
TAGACTTGGT TAATTCCTGT TCGAGTGCGT GTAATTCTTT ATTGATCACA CGCACATAGA 1620
ACTGTGTATT CTATTTACCT TGGATCATAC ATAGAATTGT GTGATTCACA CAACCTTGTA 1680
AAATATATTG ACTGAAATTT GGCTCGATTT TTTGCCTG
1719Nucleotide Fasta Sequence
>BRADI4G40960.1|Class-I|Brachypodium distachyon
GTGGTATTACGGCTTCTCTTGTTCAGGGGAGGATAAGAGGAGAGGGCGAGGGAGAGGTCTCGAGAACTCTGTGGCAGATGATGGAGCGGCTTTGGATACCATCCCATCAGACTCTTGGAGGTAGAATGTTGCCTTTTCTCAGACACTACTGTGTCTTTGGAAGTCATCATCCCTTAACCTGGAGCGGCTTACAAACCACTGAGAGAAAACATAACCAAAATGGAGGCTGGATTGCACAGTGCGCGGCAAGTGGCAATGGACCTTCTGTTTCAGACATAAATGGTGCTCAAAAGGATTTTGCTTTGCCAGATAGTTTGCTTTGCAATGCTCGTATTCTCTATTGTGCATCTCCTGCCATGGGTCACAACAAGGAATCGCATCCAGAATCTAACAAAAGAGTGCCGGCAATAGTCGATGCTCTCGAAAAATTGGAGCTTACGCCCAAGCATCGTGGATCACAGGTTCTTGAAATTCAAAATTTCCACCCTGCTTCACTTGATGATGTTGCACGAGTTCATTCAAGAAAATACATTACTGGACTCGAAAAGGCTATGAGTAGGGCTTCAGATGAAGGTTTGATATTCATTGAAGGAACTGGACCAACATATGCTACACAGACTACCTTCCAAGAATCACTTCTTGCAGCTGGTGCTGGAATTACATTGGTTGATTCAGTGGTTGCAGCATCAAAGCTGGGCCCAAGCCCACCCCTTGGATTTGCGCTAGTAAGGCCACCAGGACACCATGCGGTTCCTGAAGGTCCCATGGGCTTTTGCGTCTTTGGGAACATTGCAGTGGCAGCTCGGTACGCCCAGCATCAACATGGATTAAAGCGGGTCATGATAATAGATTTCGATGTTCACCATGGCAATGGAACATGTGATGCCTTTTATGATGACCCAGACATCTTCTTCCTCTCAACCCATCAGCTAGGAAGCTATCCTGGCACCGGTAAGATGAACCTAATTGGTCAAGGCAGCAGCGAAGGAACAACGCTCAACCTGCCACTGCCTGGTGGCTCAGGTGATTACTCAATGAGGTGTGCATTTGATGAGGTGATTGCTCCATCAGCACAGCGATTCAAGCCTGACATCATCCTGGTTTCAGCTGGCTACGACGCGCATGCGCTGGACCCGCTAGCGGGGCTGCAGTTCACGACGGGCACGTACTACACGCTGGCGTCGAGCATCAAGCAGCTGGCCGGGGATCTCTGCGGTGGCCGCTGCGTCTTCTTCCTGGAAGGCGGCTACAACCTGCAGTCTCTCTCCAGCTCCGTCGCAGACACCTTCCGCGCGTTCCTCGACGAGCCCAGCCTCGCCGCGCAGTTCGACAACCCGGCGATGCTCTACGAGGAGCCAACGCGGAGGGTGAAGGAGGCGATCGAGAAGGTCAGGCATCTCCACTCGCTGTAGATTACACACCGGAGATGAGCTCAGGCACACTGCTGCTTTGCAGTGTGCGCGCTGCAGAGTCAGATTGTGTGCTGCGTTTGCAGGTGTAGCGTGTGTGTATGTGTGTGTATAAACTGTATGTATTTTGAAGATCTGCTCGCTGCTCATTTAGACTTGGTTAATTCCTGTTCGAGTGCGTGTAATTCTTTATTGATCACACGCACATAGAACTGTGTATTCTATTTACCTTGGATCATACATAGAATTGTGTGATTCACACAACCTTGTAAAATATATTGACTGAAATTTGGCTCGATTTTTTGCCTG
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
