class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletae.klekeelesltvdsdsiyles 96 
                    +gl+yde+m+kh+++ +++  hpE+p+Ri+ai+ +lq +gl+++++ l ++ka++++lqlvH++ehv+l+++ + k+++++ ++++++ ds yl+ 
  Bra029339.1-P  10 VGLLYDERMCKHDTPDGED--HPECPNRIKAIWAKLQLTGLAQRCVVLGGSKAEDKHLQLVHTKEHVNLVKSLStKKKDSRRNKIASKLDSKYLNG 103
                    789**************99..***************************************************998999999999************ PP
    class-2.txt  97 ksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk...vkkilivDwDvHhGnGtqeifykdpkvl 189
                     s++aa la+G+v+e+++kv++gel++gfa+vRPPGHHae+++amGFClfnnvavaa++l+++ +   +kkilivDwDvHhGnGtq++f+kdp+vl
  Bra029339.1-P 104 GSSEAAYLAAGSVVEVAEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASYLLNQRPdlgIKKILIVDWDVHHGNGTQKMFWKDPRVL 199
                    ************************************************************99987788**************************** PP
    class-2.txt 190 ylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl.mgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatl 284
                     +S+HR+d gsf+p+ ++g++d+vgeg+gegfn+Nv+w++g  +gd++y+a+++++++p++keF+Pdl+l+saGfDaa gdp g++ vt+ +y+ +
  Bra029339.1-P 200 VFSVHRHDGGSFYPTGDDGDYDKVGEGAGEGFNINVPWEQGRrCGDEDYIAVWDHILIPVTKEFNPDLILLSAGFDAAIGDPRGRCFVTPYGYSVM 295
                    ****************************************999***************************************************** PP
    class-2.txt 285 tkqllklaggrvvlvlEGGynlk 307
                     k+l+++a+g++v++lEGGynl 
  Bra029339.1-P 296 LKKLMEFAQGKIVMALEGGYNLG 318
                    ********************985 PP
    class-2.txt  20 kekhpEkpeRiqailsrlqeaglleklee.lkarkatkeelqlvHseehv 68 
                     ++  E +e++++++s+l+ea++   +++ l +++ ++++l++v   ++ 
  Bra029339.1-P 373 AAEAKEAAEKLTHVSSELREAKIDLDFQReLFKKASEEKKLLEVRVLKLE 422
                    34478999999999999999988776554144455555566666654444 PP

    class-1.txt   5 yaydedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvf.dg 97 
                      yde++ ++ +  g++hp  p+r++ +   +   gl ++  ++  +ka+ ++l+ +h++e+++++k+ +++++++  +++   + + d+  +  g
  Bra029339.1-P  12 LLYDERMCKHDTpdGEDHPECPNRIKAIWAKLQLTGLAQRCVVLGGSKAEDKHLQLVHTKEHVNLVKSLSTKKKDSRRNKI---ASKLDSKYLnGG 104
                    56666666665444899***********9999999**********************************999888766443...334455544056 PP
    class-1.txt  98 lfeycqlitGasleaakkLnkkeadi..ainwaGGlhhakkseasGfcyvnDivlailellkk.....hkrvlyididlhhGDgveeafyttdrvm 186
                      e + l +G+ +e a+k+ ++e d   ai      hha  +ea Gfc  n++ +a   ll +      k++l +d d+hhG+g ++ f +  rv+
  Bra029339.1-P 105 SSEAAYLAAGSVVEVAEKVAEGELDCgfAIVRPP-GHHAEADEAMGFCLFNNVAVAASYLLNQrpdlgIKKILIVDWDVHHGNGTQKMFWKDPRVL 199
                    778888999999*********9988611555554.5********************99999853333368************************** PP
    class-1.txt 187 tvsfhkygee.ffPgt..GdlsdvgaekgkyyavnvPlkdg..idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaec 277
                      s+h+++ + f+P+   Gd + vg++ g  + +nvP ++g  + De y ++  +++ +v++ f+P+ ++l  G D+  gD+ g   ++  g++ +
  Bra029339.1-P 200 VFSVHRHDGGsFYPTGddGDYDKVGEGAGEGFNINVPWEQGrrCGDEDYIAVWDHILIPVTKEFNPDLILLSAGFDAAIGDPRGRCFVTPYGYSVM 295
                    *******86527775333789999***************997789***************************************999********* PP
    class-1.txt 278 vkfvksf.nlpllvlGGGGYtl 298
                    +k + +f + ++++   GGY+l
  Bra029339.1-P 296 LKKLMEFaQGKIVMALEGGYNL 317
                    *******777888888999986 PP