WERAM Information


Tag Content
WERAM ID WERAM-Orla-0178
Ensembl Protein ID ENSORLP00000020522.1
Gene Name hdac7b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSORLG00000016388.1 ENSORLT00000020523.1 ENSORLP00000020522.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.80e-141 471.3 512 851
HDAC Class-I 6.70e-34 118.1 530 820
Organism Oryzias latipes
Domain Profile
  HDAC Class-II

           class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 
+gl yd++m +hq+ ++++++hpE+++Riq+++srl+e+gl +++e++++rkat eelq++Hse+hv+l+++ +l++ + ++
ENSORLP00000020522.1 512 TGLAYDSQMQRHQCSCGDNSRHPEHSGRIQSVWSRLNERGLKNQCECIQSRKATAEELQSIHSEKHVHLFGND-TLSRLKQDNhkltgp 599
789*******************************************************************998.666666666669*** PP
class-2.txt 85 ...........ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkv 162
++vd d++++e+++++a+r+a+G+v++l+ kv++ el+ngfavvRPPGHHa++s++ GFC+fn+va+aak+lq+kl+v
ENSORLP00000020522.1 600 qplfvllpcggVGVDIDTVWNEHHTAAASRIAAGCVIDLALKVAQRELRNGFAVVRPPGHHATHSSPLGFCFFNSVAIAAKQLQSKLNV 688
***************************************************************************************** PP
class-2.txt 163 kkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlpi 248
+kilivDwDvHhGnGtqe+fy+dp+vly+SlHRyd+g+ffp gsg+++evg+g+g+gfnvNv w ggl mgda ylaafr vv+pi
ENSORLP00000020522.1 689 SKILIVDWDVHHGNGTQEAFYDDPSVLYISLHRYDDGNFFP--GSGNPNEVGSGEGKGFNVNVGWMGGLnppMGDAKYLAAFRAVVMPI 775
*****************************************..********************************************** PP
class-2.txt 249 akeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
a+eF+P++vlvsaGfDa+eg ++lgg++vtakc++ lt+ql++laggrvvl+lEGG++lkai++a+ea+v+aLlg
ENSORLP00000020522.1 776 AHEFSPEVVLVSAGFDAVEGhsAALGGYKVTAKCFGFLTRQLMSLAGGRVVLALEGGHDLKAICDASEACVSALLG 851
********************9999**************************************************96 PP

  HDAC Class-I

           class-1.txt  17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyief.....lkkvepenae.......elskelkkfnvgedcP 93 
+++hp r++ + + + + gl+++ e ++++ka+aeel++ hse+++++ l++ +++n++ + +v+ d+
ENSORLP00000020522.1 530 NSRHPEHSGRIQSVWSRLNERGLKNQCECIQSRKATAEELQSIHSEKHVHLfgndtLSRLKQDNHKltgpqplFVLLPCGGVGVDIDTV 618
467999999***************************************97512222667777777654433211112233344444444 PP
class-1.txt 94 vfdg.lfeycqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgvee 177
++ +++ +G ++ a k+ ++e a+ G hha +s+ Gfc+ n + +a +l+ + +++l +d d+hhG+g +e
ENSORLP00000020522.1 619 WNEHhTAAASRIAAGCVIDLALKVAQRELRngFAVVRPPG-HHATHSSPLGFCFFNSVAIAAKQLQSklNVSKILIVDWDVHHGNGTQE 706
33331344567789999******99988651255655555.9***********************9834567***************** PP
class-1.txt 178 afyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdg....idDesyekifksviskvieafePeavvlqcGaDslag 261
afy v+ +s+h+y++ +ffPg+G+ ++vg ++gk + vnv g + D +y + f+ v+ ++ + f+Pe+v++ G D++ g
ENSORLP00000020522.1 707 AFYDDPSVLYISLHRYDDgNFFPGSGNPNEVGSGEGKGFNVNVGWMGGlnppMGDAKYLAAFRAVVMPIAHEFSPEVVLVSAGFDAVEG 795
****************9746***********************87666222267*********************************87 PP
class-1.txt 262 D..rlgefnlsikghaecvkfvksf 284
lg ++++ k ++ + + s
ENSORLP00000020522.1 796 HsaALGGYKVTAKCFGFLTRQLMSL 820
6226999999999888766655555 PP

Protein Sequence
(Fasta)
MDLSLSHRLL HPGPDSGILA PHPPFFLGSL NPQHCPQFSQ PHMQVKQYNA EQRQKMDEKP 60
EEQLMRKSKN EQSAVASSFV KRKLRDHIIM KNHERVTPSH PSPPPGYGLP KKNLQHLKAI 120
PNTVSPAVMS SFLLSPKPQP GACDQRQDLA LRRTVSEPTL KWKLKKLISM RPNPLQRKIS 180
APPSVKHKTE TLDSSPSSCS SSSASGCSSP NDTLYDLGPP PPAHETDEKK LELSGKAHQL 240
YVATGPDADL HIRQQMALQP VYLHSEGSSQ ALLQRLQPLI IFEPRTGFVH SQLISVHGLS 300
SIAHQHPPHL PSPSKEGLVT LPSHQTVKRT YSEPLPHSHS ALPPRTSHHQ HIQQQLSQDY 360
HKNGLERFKL GSHFIKKCSN RPDLHEEDMD LESGTGSGTG SACSSEPGSL CDDGRQPDRV 420
FPFTQPDQIL LLLQIYLNYR QTFCELQRQL NVRASLQPDA LTVPTAFWHK PVYRTRSLPP 480
STSLLSTSQP CVTVPSLTLS NAGSDVKLRF TTGLAYDSQM QRHQCSCGDN SRHPEHSGRI 540
QSVWSRLNER GLKNQCECIQ SRKATAEELQ SIHSEKHVHL FGNDTLSRLK QDNHKLTGPQ 600
PLFVLLPCGG VGVDIDTVWN EHHTAAASRI AAGCVIDLAL KVAQRELRNG FAVVRPPGHH 660
ATHSSPLGFC FFNSVAIAAK QLQSKLNVSK ILIVDWDVHH GNGTQEAFYD DPSVLYISLH 720
RYDDGNFFPG SGNPNEVGSG EGKGFNVNVG WMGGLNPPMG DAKYLAAFRA VVMPIAHEFS 780
PEVVLVSAGF DAVEGHSAAL GGYKVTAKCF GFLTRQLMSL AGGRVVLALE GGHDLKAICD 840
ASEACVSALL GMEVEPLSQS VLDQKPCENA VRSLQRVIQV QGEFWQSVRD SAATVDLSYL 900
QAQRQRLRRD SDSEAVSAIA SLSMGSLTSE RKQQEKKSEK MDS 943
Nucleotide Sequence
(Fasta)
ATGGACCTAA GTCTGAGCCA CAGGTTGTTG CATCCAGGAC CAGATTCTGG GATTCTGGCC 60
CCTCACCCTC CTTTCTTCCT GGGGTCCCTT AACCCTCAGC ATTGTCCACA GTTTTCACAG 120
CCACACATGC AGGTAAAACA GTACAACGCT GAACAAAGGC AAAAGATGGA CGAGAAGCCA 180
GAAGAGCAGC TGATGCGAAA GAGTAAAAAT GAGCAGAGCG CTGTTGCCAG TTCGTTTGTC 240
AAAAGAAAAC TTCGGGACCA CATCATTATG AAGAACCATG AGAGGGTCAC TCCCAGCCAC 300
CCCAGCCCTC CCCCAGGATA TGGCTTGCCT AAAAAAAATC TGCAACATCT AAAAGCTATC 360
CCCAACACGG TTTCTCCCGC TGTGATGTCA TCATTTCTTT TGTCCCCAAA GCCGCAGCCA 420
GGAGCCTGTG ACCAGCGTCA GGACCTGGCC CTTCGAAGAA CAGTCTCAGA GCCCACACTC 480
AAGTGGAAGT TGAAAAAACT CATCTCCATG AGGCCTAACC CACTGCAGCG CAAGATCAGC 540
GCTCCCCCCT CTGTCAAACA TAAGACAGAA ACTCTGGACT CATCCCCGAG CAGCTGCAGC 600
AGCTCCTCTG CATCAGGATG CAGCTCACCA AATGATACCC TGTACGACCT TGGCCCCCCA 660
CCACCAGCTC ATGAGACAGA TGAGAAAAAA CTGGAGCTTT CTGGTAAGGC ACATCAGCTC 720
TATGTTGCCA CAGGACCTGA TGCTGACTTG CACATAAGAC AACAAATGGC TCTCCAACCT 780
GTCTACCTGC ATTCGGAAGG AAGCAGTCAA GCTCTGCTTC AGCGCTTGCA GCCATTGATC 840
ATTTTTGAAC CACGCACTGG CTTTGTCCAC TCCCAGCTCA TCTCTGTTCA TGGCCTGAGT 900
TCTATCGCTC ACCAGCATCC TCCTCACCTG CCGTCCCCCT CCAAAGAAGG CTTGGTCACT 960
TTGCCTTCTC ACCAAACTGT GAAGCGGACA TATTCAGAGC CACTGCCGCA TAGCCACTCA 1020
GCTCTTCCCC CCCGCACGTC CCACCACCAA CACATTCAGC AGCAGTTGTC CCAGGACTAC 1080
CACAAGAATG GATTGGAGAG GTTCAAACTA GGCTCTCACT TTATTAAGAA ATGCAGCAAC 1140
AGGCCAGACC TTCATGAGGA GGACATGGAC CTAGAGAGCG GTACGGGATC AGGGACAGGG 1200
TCGGCTTGCA GCTCAGAACC GGGCTCACTG TGTGATGACG GTAGACAGCC TGATCGAGTC 1260
TTCCCTTTCA CCCAGCCAGA TCAGATCCTC CTGCTGCTGC AGATTTACCT CAATTACAGA 1320
CAAACGTTTT GCGAATTACA GAGACAGCTG AACGTCAGAG CAAGTCTGCA GCCGGATGCG 1380
CTGACCGTAC CAACTGCCTT TTGGCACAAG CCGGTGTACC GGACGCGCTC CTTACCGCCC 1440
TCCACCTCGC TGCTCTCCAC CTCGCAGCCC TGCGTGACGG TGCCGTCTCT GACGTTGTCT 1500
AACGCCGGTT CAGACGTGAA GTTACGCTTC ACTACAGGTC TGGCGTATGA TTCTCAGATG 1560
CAGAGGCACC AGTGTTCATG TGGAGACAAC AGCCGCCACC CTGAGCATTC GGGTAGGATT 1620
CAGAGCGTCT GGTCCAGACT AAATGAAAGA GGGCTGAAAA ACCAGTGCGA GTGCATCCAG 1680
AGCAGAAAGG CCACAGCCGA GGAGCTGCAG TCAATTCATT CAGAAAAGCA TGTGCATTTG 1740
TTTGGCAACG ACACGCTCAG CCGCCTCAAG CAGGACAACC ACAAACTCAC TGGACCTCAG 1800
CCTCTTTTTG TCTTACTTCC ATGTGGAGGG GTTGGGGTGG ACATTGACAC AGTGTGGAAT 1860
GAGCATCACA CTGCAGCAGC ATCTCGCATC GCCGCCGGGT GTGTCATAGA CTTGGCGCTG 1920
AAGGTGGCAC AGAGAGAGCT AAGGAATGGC TTTGCAGTGG TGAGGCCCCC AGGTCACCAT 1980
GCAACCCACT CCTCCCCTCT GGGCTTCTGT TTCTTTAACT CTGTGGCTAT CGCTGCCAAG 2040
CAGCTCCAAA GCAAGCTCAA CGTCAGCAAA ATCCTCATAG TAGACTGGGA TGTTCATCAT 2100
GGAAACGGCA CCCAGGAGGC CTTCTACGAT GACCCAAGTG TCCTCTACAT CTCTCTGCAT 2160
CGCTATGATG ACGGAAATTT CTTTCCCGGT AGTGGAAATC CTAACGAGGT GGGTTCAGGT 2220
GAAGGGAAAG GCTTCAACGT GAATGTCGGA TGGATGGGCG GCTTGAACCC TCCGATGGGC 2280
GACGCAAAAT ACCTGGCTGC ATTTAGAGCT GTGGTGATGC CCATCGCACA CGAGTTCTCC 2340
CCTGAAGTTG TGCTGGTGTC CGCTGGCTTT GATGCTGTGG AGGGACATTC TGCTGCGCTG 2400
GGAGGCTACA AGGTTACCGC CAAATGTTTT GGCTTCCTGA CTCGTCAGCT GATGTCGCTA 2460
GCCGGTGGCA GAGTGGTCCT CGCCCTGGAG GGGGGGCACG ACCTCAAAGC CATCTGTGAC 2520
GCCTCTGAAG CCTGCGTTAG CGCCCTGTTG GGCATGGAGG TGGAGCCCCT GTCCCAGTCT 2580
GTGCTGGACC AGAAGCCCTG TGAAAACGCA GTGCGCTCAC TGCAGAGGGT CATCCAGGTT 2640
CAGGGTGAAT TCTGGCAGAG TGTGAGGGAT TCTGCCGCCA CCGTGGATCT GTCCTACCTG 2700
CAGGCGCAGA GACAAAGGCT TAGGCGGGAC TCCGACAGTG AGGCTGTCAG CGCCATCGCC 2760
TCCCTGTCCA TGGGATCGCT CACATCTGAG AGGAAACAGC AGGAAAAAAA GTCGGAGAAA 2820
ATGGATTCC
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orn-0227 ENSONIP00000024390.1 Oreochromis niloticus 64 0.0 1069
WERAM-Xim-0225 ENSXMAP00000018758.1 Xiphophorus maculatus 64 0.0 1065
WERAM-Pof-0015 ENSPFOP00000001511.2 Poecilia formosa 63 0.0 1055
WERAM-Gaa-0079 ENSGACP00000010554.1 Gasterosteus aculeatus 62 0.0 1027
WERAM-Tar-0132 ENSTRUP00000028721.1 Takifugu rubripes 60 0.0 962
WERAM-Gaga-0067 ENSGALP00000010190.4 Gallus gallus 48 0.0 739
WERAM-Pes-0124 ENSPSIP00000014863.1 Pelodiscus sinensis 48 0.0 722
WERAM-Anc-0160 ENSACAP00000015012.3 Anolis carolinensis 46 0.0 703
WERAM-Leo-0044 ENSLOCP00000006280.1 Lepisosteus oculatus 48 0.0 699
WERAM-Ten-0061 ENSTNIP00000000291.1 Tetraodon nigroviridis 51 0.0 692
WERAM-Caf-0101 ENSCAFP00000013479.3 Canis familiaris 47 0.0 657
WERAM-Bot-0201 ENSBTAP00000038136.4 Bos taurus 46 0.0 655
WERAM-Chs-0077 ENSCSAP00000002870.1 Chlorocebus sabaeus 48 0.0 649
WERAM-Tut-0143 ENSTTRP00000011934.1 Tursiops truncatus 46 0.0 647
WERAM-Anp-0061 ENSAPLP00000006782.1 Anas platyrhynchos 51 0.0 644
WERAM-Meg-0108 ENSMGAP00000010913.2 Meleagris gallopavo 50 0.0 642
WERAM-Ran-0240 ENSRNOP00000073744.1 Rattus norvegicus 46 0.0 642
WERAM-Ict-0024 ENSSTOP00000001667.2 Ictidomys tridecemlineatus 45 0.0 639
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 67 3e-178 623
WERAM-Xet-0073 ENSXETP00000023344.3 Xenopus tropicalis 70 1e-177 621
WERAM-Dar-0240 ENSDARP00000132042.1 Danio rerio 71 2e-177 620
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 66 9e-175 611
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 66 5e-174 609
WERAM-Fec-0138 ENSFCAP00000012982.3 Felis catus 68 1e-173 607
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 66 1e-173 607
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 66 1e-173 607
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 66 2e-173 607
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 68 2e-173 607
WERAM-Aim-0143 ENSAMEP00000013629.1 Ailuropoda melanoleuca 69 2e-173 607
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 65 2e-173 607
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 66 3e-173 606
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 65 3e-173 606
WERAM-Eqc-0166 ENSECAP00000018277.1 Equus caballus 69 3e-173 606
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 65 4e-173 606
WERAM-Paa-0072 ENSPANP00000008610.1 Papio anubis 69 5e-173 605
WERAM-Nol-0194 ENSNLEP00000021748.1 Nomascus leucogenys 69 1e-172 605
WERAM-Gog-0184 ENSGGOP00000016066.2 Gorilla gorilla 69 1e-172 604
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 65 8e-172 602
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 65 3e-171 600
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 65 3e-171 599
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 65 5e-171 599
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 65 8e-171 598
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 64 1e-170 598
WERAM-Dan-0112 ENSDNOP00000014271.3 Dasypus novemcinctus 67 8e-169 592
WERAM-Ova-0207 ENSOARP00000020819.1 Ovis aries 68 1e-168 591
WERAM-Ptv-0096 ENSPVAP00000008849.1 Pteropus vampyrus 67 3e-168 590
WERAM-Mam-0226 ENSMMUP00000028518.2 Macaca mulatta 73 3e-167 587
WERAM-Mim-0087 ENSMICP00000008193.1 Microcebus murinus 44 1e-165 581
WERAM-Prc-0083 ENSPCAP00000007167.1 Procavia capensis 67 1e-164 578
WERAM-Mae-0085 ENSMEUP00000008564.1 Macropus eugenii 64 2e-164 577
WERAM-Orc-0142 ENSOCUP00000012429.3 Oryctolagus cuniculus 65 3e-163 573
WERAM-Poa-0072 ENSPPYP00000009379.1 Pongo abelii 65 5e-163 572
WERAM-Dio-0163 ENSDORP00000015416.1 Dipodomys ordii 65 2e-162 570
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 64 3e-162 570
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 65 6e-162 569
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 64 5e-161 566
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 60 3e-155 546
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 68 3e-155 546
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 59 3e-152 536
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 60 3e-147 520
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 64 7e-141 499
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 54 1e-128 458
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 51 1e-121 434
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 67 2e-119 427
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 48 1e-113 409
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 60 2e-106 384
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 54 5e-90 330
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 40 8e-79 293
WERAM-Php-0085 PP1S34_252V6.1 Physcomitrella patens 44 1e-77 288
WERAM-Bro-0168 Bo9g014470.1 Brassica oleracea 39 2e-77 288
WERAM-Brr-0181 Bra035942.1-P Brassica rapa 41 4e-77 287
WERAM-Org-0078 ORGLA07G0164500.1 Oryza glaberrima 37 3e-76 284
WERAM-Ors-0072 OS07T0602200-01 Oryza sativa 37 4e-76 284
Created Date 25-Jun-2016