Tag |
Content |
WERAM ID |
WERAM-Ocp-0057 |
Ensembl Protein ID |
ENSOPRP00000005096.1 |
Gene Name |
HDAC6 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
7.90e-136 |
452.1 |
1 |
417 |
HDAC |
Class-I |
4.80e-33 |
114.7 |
113 |
409 |
|
Organism |
Ochotona princeps |
Domain Profile |
HDAC Class-II
class-2.txt 302 GGynlkaiaeaveavvkaLlg 322 GGynl+++ae+v+a++++Llg ENSOPRP00000005096.1 1 GGYNLRSLAEGVSASLHTLLG 21 9******************96 PP class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeelesltvdsd 90 +gl+yd++m++h +l++n+ hpE+p+Ri +i+ +l+e gl+++++ l ar at+ el+++Hs+e+ve+++ +e+++++el++++ ++d ENSOPRP00000005096.1 98 TGLIYDQRMMSHCNLWDNH--HPETPQRILRIMCHLEELGLAGRCLILPARPATDVELLTCHSAEYVERIRATESMKTRELHREGANFD 184 799*************999..******************************************************************** PP class-2.txt 91 siylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk.vkkilivDwDvHhGnGt 178 siy+ ++++++a+la+G+v++lv++v++ge+ ng+a+vRPPGHHae+++a+GFC+fn+vavaa+++q + +ilivDwD+HhGnGt ENSOPRP00000005096.1 185 SIYICPNTFSCAQLATGTVCRLVEAVMEGEVLNGVALVRPPGHHAERNAACGFCFFNSVAVAARHAQAISGrALRILIVDWDIHHGNGT 273 *******************************************************************977669**************** PP class-2.txt 179 qeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaae 267 q+if++dp+vly+SlHRyd+g+ffp ++g+ +++g+g+g+gf+vNv wn+ +gd++yl+a++++vlpia+eF+P+lvlvsaGfDaa+ ENSOPRP00000005096.1 274 QHIFENDPSVLYISLHRYDQGTFFPVGDEGSCNRIGRGAGTGFTVNVGWNTSRIGDSDYLMAWHRLVLPIAYEFNPELVLVSAGFDAAR 362 ***************************************************************************************** PP class-2.txt 268 gdplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 gdplgg++v+++cya+lt+ql++laggr++lvlEGGynl++i+e+++a++++Llg ENSOPRP00000005096.1 363 GDPLGGCHVSPECYAHLTHQLMGLAGGRIILVLEGGYNLTSISESMAACTRSLLG 417 *****************************************************96 PP
HDAC Class-I
class-1.txt 16 ygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycql 104 +++hp p+r+ + + + gl + i+ ++ a+ ell++hs ey+e ++ e+ +++el++e ++f+ + cP + f+ +ql ENSOPRP00000005096.1 113 WDNHHPETPQRILRIMCHLEELGLAGRCLILPARPATDVELLTCHSAEYVERIRATESMKTRELHREGANFDSIYICP---NTFSCAQL 198 47899*******9999999****************************************************9999898...7899**** PP class-1.txt 105 itGasleaakkLnkkeadiainw.aGGlhhakkseasGfcyvnDivlailellk...khkrvlyididlhhGDgveeafyttdrvmtvs 189 tG+ + ++ + ++e ++ hha ++ a Gfc+ n + +a + + r+l +d d+hhG+g ++ f++ v+ +s ENSOPRP00000005096.1 199 ATGTVCRLVEAVMEGEVLNGVALvRPPGHHAERNAACGFCFFNSVAVAARHAQAisgRALRILIVDWDIHHGNGTQHIFENDPSVLYIS 287 *************999876666513456******************998655442227889**************************** PP class-1.txt 190 fhkygee.ffPg..tGdlsdvgaekgkyyavnvPlkdg.idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikgh 274 +h+y+++ ffP G+ + +g + g ++vnv + + i D+ y ++++ ++ f+Pe v++ G D+ gD+lg ++s + + ENSOPRP00000005096.1 288 LHRYDQGtFFPVgdEGSCNRIGRGAGTGFTVNVGWNTSrIGDSDYLMAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCHVSPECY 376 ****9854999523699****************997644************************************************** PP class-1.txt 275 aecvkfvksf.nlpllvlGGGGYtlrnvaRcwt 306 a+ + + ++++ GGY+l+ ++ + ENSOPRP00000005096.1 377 AHLTHQLMGLaGGRIILVLEGGYNLTSISESMA 409 **7766655548889999999***999987665 PP
|
Protein Sequence (Fasta) | GGYNLRSLAE GVSASLHTLL GDPCPMLVSP GIPCRSAQNS LSCTLGAIEP FWEFLLRPVE 60 IIEEDIMEED SMEESEESEL WEPPVLPMLT WPVLPARTGL IYDQRMMSHC NLWDNHHPET 120 PQRILRIMCH LEELGLAGRC LILPARPATD VELLTCHSAE YVERIRATES MKTRELHREG 180 ANFDSIYICP NTFSCAQLAT GTVCRLVEAV MEGEVLNGVA LVRPPGHHAE RNAACGFCFF 240 NSVAVAARHA QAISGRALRI LIVDWDIHHG NGTQHIFEND PSVLYISLHR YDQGTFFPVG 300 DEGSCNRIGR GAGTGFTVNV GWNTSRIGDS DYLMAWHRLV LPIAYEFNPE LVLVSAGFDA 360 ARGDPLGGCH VSPECYAHLT HQLMGLAGGR IILVLEGGYN LTSISESMAA CTRSLLGDPL 420 PVLALSRAPQ PSALTSVTET IQAHRKYWRS LWITXXXXXX XXXXXXXXEG ITNKPTRPIN 480 PAPVERMTPA VKKLLEAGMG KASSSLSAVK SIPAQTESKT AVMRTEAQAS QAATGLATLH 540 QTTSEATMGG AMMEQTTWES ATGVATPDQT TSEEAVGGAL LDQTTSEVSM GETILDKIIS 600 EEVVKEDRLK QITSEEAVGA AKLIQTPLGS STDKQTPPTS PVPGATPQLS PSQLAGSLRT 660 LQLGSEPQKT SEPQPPEEEG LLAEAAGGRD VDDAKLMQGA GGLADTNQAM FYAVTPMSWC 720 PHLVAVSPIP ASGLDVTQKC QDCGTPKENW VCLSCYKVYC SRFINAHMVQ HHEASGHPLV 780 LSYVDLSVWC YPCQAYVHHQ VLLDVKNTVH QNKFGVDIPH PH 822Protein Fasta Sequence
>ENSOPRP00000005096.1|Class-I|Ochotona princeps GGYNLRSLAEGVSASLHTLLGDPCPMLVSPGIPCRSAQNSLSCTLGAIEPFWEFLLRPVEIIEEDIMEEDSMEESEESELWEPPVLPMLTWPVLPARTGLIYDQRMMSHCNLWDNHHPETPQRILRIMCHLEELGLAGRCLILPARPATDVELLTCHSAEYVERIRATESMKTRELHREGANFDSIYICPNTFSCAQLATGTVCRLVEAVMEGEVLNGVALVRPPGHHAERNAACGFCFFNSVAVAARHAQAISGRALRILIVDWDIHHGNGTQHIFENDPSVLYISLHRYDQGTFFPVGDEGSCNRIGRGAGTGFTVNVGWNTSRIGDSDYLMAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCHVSPECYAHLTHQLMGLAGGRIILVLEGGYNLTSISESMAACTRSLLGDPLPVLALSRAPQPSALTSVTETIQAHRKYWRSLWITXXXXXXXXXXXXXXEGITNKPTRPINPAPVERMTPAVKKLLEAGMGKASSSLSAVKSIPAQTESKTAVMRTEAQASQAATGLATLHQTTSEATMGGAMMEQTTWESATGVATPDQTTSEEAVGGALLDQTTSEVSMGETILDKIISEEVVKEDRLKQITSEEAVGAAKLIQTPLGSSTDKQTPPTSPVPGATPQLSPSQLAGSLRTLQLGSEPQKTSEPQPPEEEGLLAEAAGGRDVDDAKLMQGAGGLADTNQAMFYAVTPMSWCPHLVAVSPIPASGLDVTQKCQDCGTPKENWVCLSCYKVYCSRFINAHMVQHHEASGHPLVLSYVDLSVWCYPCQAYVHHQVLLDVKNTVHQNKFGVDIPHPH
|
Nucleotide Sequence (Fasta) | GGTGGCTATA ATCTCCGTTC TCTGGCTGAG GGTGTCAGCG CCTCACTCCA CACTCTTCTG 60 GGAGACCCTT GCCCCATGCT GGTGTCCCCT GGTATCCCCT GCCGAAGTGC CCAGAATTCA 120 CTCTCCTGTA CTCTGGGAGC CATTGAGCCT TTCTGGGAGT TTCTTCTGAG ACCAGTTGAG 180 ATCATCGAGG AGGACATCAT GGAAGAGGAC AGCATGGAAG AGAGTGAGGA ATCTGAACTC 240 TGGGAGCCAC CTGTGTTGCC AATGCTGACA TGGCCGGTGC TGCCGGCTCG CACGGGGCTG 300 ATCTATGACC AGCGAATGAT GAGTCACTGC AACTTATGGG ACAACCACCA TCCGGAGACA 360 CCCCAACGTA TCTTGCGGAT CATGTGTCAT CTGGAGGAGC TGGGCCTTGC TGGACGCTGT 420 CTCATCCTGC CTGCGCGACC CGCCACAGAT GTTGAACTGC TCACCTGCCA CAGTGCTGAG 480 TATGTGGAGC GCATTCGAGC CACGGAGAGT ATGAAGACCC GGGAACTGCA TCGCGAGGGT 540 GCCAATTTTG ACTCCATCTA CATCTGCCCC AACACCTTCA GCTGTGCACA GCTTGCCACC 600 GGCACCGTCT GTCGCCTCGT GGAAGCTGTG ATGGAAGGAG AGGTTTTGAA TGGTGTTGCC 660 CTGGTGCGCC CCCCAGGACA CCATGCCGAG CGAAATGCTG CATGTGGTTT CTGCTTTTTT 720 AACTCCGTGG CCGTGGCTGC TCGCCATGCC CAGGCCATCA GTGGGCGTGC CCTGCGGATC 780 TTGATTGTGG ACTGGGACAT CCATCATGGT AATGGAACTC AGCACATTTT TGAGAATGAT 840 CCCAGTGTGC TCTACATATC CCTGCACCGT TATGATCAAG GCACTTTCTT CCCCGTGGGG 900 GATGAGGGCT CCTGCAACCG CATAGGCAGG GGTGCAGGCA CAGGCTTCAC TGTCAACGTG 960 GGCTGGAATA CCTCCCGCAT AGGGGATTCT GACTACCTGA TGGCCTGGCA TCGTCTGGTG 1020 CTTCCCATTG CATATGAGTT TAACCCAGAA CTGGTACTGG TCTCAGCTGG CTTTGACGCT 1080 GCACGAGGGG ACCCACTGGG GGGCTGCCAT GTGTCACCTG AGTGTTACGC ACATCTCACC 1140 CACCAGCTGA TGGGCCTTGC CGGTGGCCGC ATTATCCTTG TACTAGAGGG TGGCTATAAC 1200 CTCACCTCCA TCTCAGAGTC TATGGCTGCC TGCACCCGCT CCCTTCTCGG AGACCCACTG 1260 CCGGTGCTGG CCCTGTCACG GGCGCCGCAG CCAAGCGCCC TGACCTCAGT CACAGAAACC 1320 ATCCAGGCCC ATCGCAAATA TTGGCGTAGC TTATGGATCA CAANNNNNNN NNNNNNNNNN 1380 NNNNNNNNNN NNNNNNNNNN NNNNGAAGGC ATCACCAATA AACCAACTAG ACCAATTAAT 1440 CCTGCACCAG TTGAGAGGAT GACCCCAGCA GTAAAGAAGC TTCTGGAAGC AGGCATGGGG 1500 AAGGCGAGCT CATCACTGTC TGCAGTGAAG TCCATTCCAG CCCAGACTGA ATCAAAGACA 1560 GCTGTGATGC GCACTGAGGC CCAGGCCTCA CAGGCAGCCA CAGGGTTAGC CACGCTGCAC 1620 CAGACCACCT CAGAAGCAAC CATGGGAGGA GCGATGATGG AACAGACCAC CTGGGAATCA 1680 GCCACAGGGG TAGCTACACC AGACCAGACC ACCTCAGAGG AGGCTGTGGG AGGAGCCTTA 1740 CTGGACCAGA CCACCTCAGA GGTTTCCATG GGGGAAACCA TACTGGACAA GATCATTTCA 1800 GAGGAGGTTG TGAAAGAAGA CAGGCTGAAA CAGATCACCT CAGAGGAGGC TGTGGGGGCA 1860 GCCAAGCTGA TCCAAACTCC TCTAGGCTCC AGCACAGATA AGCAGACTCC CCCAACCTCA 1920 CCTGTGCCAG GAGCCACACC CCAGCTATCC CCCAGCCAGC TGGCTGGGAG CCTCAGGACT 1980 CTGCAACTAG GCAGTGAACC TCAGAAAACC TCAGAACCTC AGCCTCCAGA AGAGGAGGGC 2040 CTACTAGCAG AGGCAGCTGG AGGTCGGGAT GTGGACGATG CGAAACTGAT GCAGGGAGCC 2100 GGGGGCCTTG CTGACACTAA CCAGGCTATG TTTTATGCTG TGACACCAAT GTCCTGGTGT 2160 CCCCATTTGG TGGCAGTGTC CCCCATACCC GCATCAGGCC TGGATGTGAC TCAAAAATGT 2220 CAGGACTGTG GAACACCCAA GGAAAACTGG GTGTGCTTAT CTTGCTATAA GGTCTACTGC 2280 AGTCGCTTCA TCAATGCTCA TATGGTCCAA CACCATGAAG CCTCTGGACA TCCGCTGGTT 2340 CTCAGCTACG TCGACCTGTC GGTCTGGTGT TATCCGTGCC AGGCCTATGT CCACCACCAG 2400 GTGCTCCTAG ATGTGAAGAA CACCGTCCAC CAGAACAAGT TTGGGGTGGA CATACCCCAT 2460 CCACATTAG
Nucleotide Fasta Sequence
>ENSOPRP00000005096.1|Class-I|Ochotona princeps GGTGGCTATAATCTCCGTTCTCTGGCTGAGGGTGTCAGCGCCTCACTCCACACTCTTCTGGGAGACCCTTGCCCCATGCTGGTGTCCCCTGGTATCCCCTGCCGAAGTGCCCAGAATTCACTCTCCTGTACTCTGGGAGCCATTGAGCCTTTCTGGGAGTTTCTTCTGAGACCAGTTGAGATCATCGAGGAGGACATCATGGAAGAGGACAGCATGGAAGAGAGTGAGGAATCTGAACTCTGGGAGCCACCTGTGTTGCCAATGCTGACATGGCCGGTGCTGCCGGCTCGCACGGGGCTGATCTATGACCAGCGAATGATGAGTCACTGCAACTTATGGGACAACCACCATCCGGAGACACCCCAACGTATCTTGCGGATCATGTGTCATCTGGAGGAGCTGGGCCTTGCTGGACGCTGTCTCATCCTGCCTGCGCGACCCGCCACAGATGTTGAACTGCTCACCTGCCACAGTGCTGAGTATGTGGAGCGCATTCGAGCCACGGAGAGTATGAAGACCCGGGAACTGCATCGCGAGGGTGCCAATTTTGACTCCATCTACATCTGCCCCAACACCTTCAGCTGTGCACAGCTTGCCACCGGCACCGTCTGTCGCCTCGTGGAAGCTGTGATGGAAGGAGAGGTTTTGAATGGTGTTGCCCTGGTGCGCCCCCCAGGACACCATGCCGAGCGAAATGCTGCATGTGGTTTCTGCTTTTTTAACTCCGTGGCCGTGGCTGCTCGCCATGCCCAGGCCATCAGTGGGCGTGCCCTGCGGATCTTGATTGTGGACTGGGACATCCATCATGGTAATGGAACTCAGCACATTTTTGAGAATGATCCCAGTGTGCTCTACATATCCCTGCACCGTTATGATCAAGGCACTTTCTTCCCCGTGGGGGATGAGGGCTCCTGCAACCGCATAGGCAGGGGTGCAGGCACAGGCTTCACTGTCAACGTGGGCTGGAATACCTCCCGCATAGGGGATTCTGACTACCTGATGGCCTGGCATCGTCTGGTGCTTCCCATTGCATATGAGTTTAACCCAGAACTGGTACTGGTCTCAGCTGGCTTTGACGCTGCACGAGGGGACCCACTGGGGGGCTGCCATGTGTCACCTGAGTGTTACGCACATCTCACCCACCAGCTGATGGGCCTTGCCGGTGGCCGCATTATCCTTGTACTAGAGGGTGGCTATAACCTCACCTCCATCTCAGAGTCTATGGCTGCCTGCACCCGCTCCCTTCTCGGAGACCCACTGCCGGTGCTGGCCCTGTCACGGGCGCCGCAGCCAAGCGCCCTGACCTCAGTCACAGAAACCATCCAGGCCCATCGCAAATATTGGCGTAGCTTATGGATCACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGGCATCACCAATAAACCAACTAGACCAATTAATCCTGCACCAGTTGAGAGGATGACCCCAGCAGTAAAGAAGCTTCTGGAAGCAGGCATGGGGAAGGCGAGCTCATCACTGTCTGCAGTGAAGTCCATTCCAGCCCAGACTGAATCAAAGACAGCTGTGATGCGCACTGAGGCCCAGGCCTCACAGGCAGCCACAGGGTTAGCCACGCTGCACCAGACCACCTCAGAAGCAACCATGGGAGGAGCGATGATGGAACAGACCACCTGGGAATCAGCCACAGGGGTAGCTACACCAGACCAGACCACCTCAGAGGAGGCTGTGGGAGGAGCCTTACTGGACCAGACCACCTCAGAGGTTTCCATGGGGGAAACCATACTGGACAAGATCATTTCAGAGGAGGTTGTGAAAGAAGACAGGCTGAAACAGATCACCTCAGAGGAGGCTGTGGGGGCAGCCAAGCTGATCCAAACTCCTCTAGGCTCCAGCACAGATAAGCAGACTCCCCCAACCTCACCTGTGCCAGGAGCCACACCCCAGCTATCCCCCAGCCAGCTGGCTGGGAGCCTCAGGACTCTGCAACTAGGCAGTGAACCTCAGAAAACCTCAGAACCTCAGCCTCCAGAAGAGGAGGGCCTACTAGCAGAGGCAGCTGGAGGTCGGGATGTGGACGATGCGAAACTGATGCAGGGAGCCGGGGGCCTTGCTGACACTAACCAGGCTATGTTTTATGCTGTGACACCAATGTCCTGGTGTCCCCATTTGGTGGCAGTGTCCCCCATACCCGCATCAGGCCTGGATGTGACTCAAAAATGTCAGGACTGTGGAACACCCAAGGAAAACTGGGTGTGCTTATCTTGCTATAAGGTCTACTGCAGTCGCTTCATCAATGCTCATATGGTCCAACACCATGAAGCCTCTGGACATCCGCTGGTTCTCAGCTACGTCGACCTGTCGGTCTGGTGTTATCCGTGCCAGGCCTATGTCCACCACCAGGTGCTCCTAGATGTGAAGAACACCGTCCACCAGAACAAGTTTGGGGTGGACATACCCCATCCACATTAG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |