WERAM Information


Tag Content
WERAM ID WERAM-Gam-0006
Ensembl Protein ID ENSGMOP00000000768.1
Gene Name hdac5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGMOG00000000748.1 ENSGMOT00000000800.1 ENSGMOP00000000768.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 2.50e-101 339.2 39 890
HDAC Class-I 7.90e-07 29.1 670 834
Organism Gadus morhua
Domain Profile
  HDAC Class-II

           class-2.txt 27 peRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklek 79
+R+q+ l++l++++ l+k ++ ++++e l+ H++++ e+l+ a ++
ENSGMOP00000000768.1 39 EQRLQQELEALKKSQELQKQRLFADFQKQHEVLTRQHEAQLQEHLKGAIASSE 91
68999999999999999999999999999999999999999999887754444 PP
class-2.txt 24 pEkpeRiqailsrlqeagllekleelka..rkatkeelql...vHseehvelletaeklekeel 82
p +p+ +q+ + + q++++lek l++ a+ e++ +H+ee e+l++++ +++ee
ENSGMOP00000000768.1 403 PQTPQALQQLVVQQQHQHFLEKHRYLHNkvILAKGAEIARpppTHPEETEEELTETNDMQEEES 466
5666666666666666666665555554112345555554222577766666666665555444 PP
class-2.txt 3 glvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles....... 84
lvyd+ mlkhq++++n++ hpE+++R+q+i+srlqe+gll+++e++++rkat++e+ +vHse h+ l++t+ +l++++l++
ENSGMOP00000000768.1 550 XLVYDSLMLKHQCVCGNTQIHPEHAGRVQSIWSRLQETGLLTRCERVRGRKATLDEVRTVHSEFHTLLYGTS-PLNRHKLDHkkilgpi 637
69*********************************************************************9.********99****** PP
class-2.txt 85 ............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk 161
++vdsd++++e++s+ a+r+avG+++el++kv++gelkngfavvRPPGHHaeestamGFC+fn va+aak+l+ kl+
ENSGMOP00000000768.1 638 snkmyaqlpcggIGVDSDTVWNEMHSSGAVRMAVGSLIELAFKVAAGELKNGFAVVRPPGHHAEESTAMGFCFFNTVAIAAKQLRLKLN 726
***************************************************************************************** PP
class-2.txt 162 vkkilivDw 170
v+kilivDw
ENSGMOP00000000768.1 727 VSKILIVDW 735
********* PP
class-2.txt 211 devgegkgegfnvNvawnggl...mgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklagg 294
vg+g+g+g+nvNvaw+gg+ mgd eyl+af+++v+pia+ F+Pd+vlvsaGfDa+eg +++lt++l++lagg
ENSGMOP00000000768.1 774 XXVGSGPGVGYNVNVAWTGGVdppMGDVEYLTAFSTLVMPIAQLFSPDVVLVSAGFDAVEGxxXXXXXXXXXXXXFGRLTQMLMELAGG 862
579**********************************************************65555666677778************** PP
class-2.txt 295 rvvlvlEGGynlkaiaeaveavvkaLlg 322
rvvl+lEGG++l+ai++a+e++v+aLlg
ENSGMOP00000000768.1 863 RVVLALEGGHDLTAICDASESCVSALLG 890
**************************96 PP

  HDAC Class-I

           class-1.txt 105 itGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyid 166
G+ +e a k+ +e + a+ hha s a Gfc+ n + +a +l+ + +++l +d
ENSGMOP00000000768.1 670 AVGSLIELAFKVAAGELKngFAVVRPP-GHHAEESTAMGFCFFNTVAIAAKQLRLklNVSKILIVD 734
455556666666655544113443333.4********************98887523667999888 PP
class-1.txt 207 vgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslag 261
vg + g y vnv + g+d D +y + f++++ ++ + f+P++v++ G D++ g
ENSGMOP00000000768.1 776 VGSGPGVGYNVNVAWTGGVDppmgDVEYLTAFSTLVMPIAQLFSPDVVLVSAGFDAVEG 834
57778888******999987777699*****************************9865 PP

Protein Sequence
(Fasta)
VCDAEGLCSP APVDLRMEPR SGALPAGGPA VGVDAGQREQ RLQQELEALK KSQELQKQRL 60
FADFQKQHEV LTRQHEAQLQ EHLKGAIASS EVKLKLQEFL LNKKEPAIXX XXXXXXXXXX 120
XRGISLDQRS PSYRLPPLLA CDGKDDFPLR KTASEPNLKV RSRLKQKVAE RRSSPLLRRK 180
DGTIISTFKK RAVEISVCPL VAALSSSAPG SGPSSPNSST TAIANGNTGS VPNIQTELRS 240
LHQTLGGDGG GPSLLLYTSP SLPNISLGLP AITVPQKLTS HQEAEIQAVQ SLRGGGALTG 300
NFLSTSCLPA GTGHDGDSPQ ATPPSSQAPP PSAHSSLLQH VLLLEQARQQ SAALLALVPM 360
YSQSPLVTAE RGMSSGRGVA LGRAVNKLPR HRPLARTQSA PLPQTPQALQ QLVVQQQHQH 420
FLEKHRYLHN KVILAKGAEI ARPPPTHPEE TEEELTETND MQEEESTESE LDEEEEEEEE 480
EQEYDEDXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 540
XXXXXXXXXX LVYDSLMLKH QCVCGNTQIH PEHAGRVQSI WSRLQETGLL TRCERVRGRK 600
ATLDEVRTVH SEFHTLLYGT SPLNRHKLDH KKILGPISNK MYAQLPCGGI GVDSDTVWNE 660
MHSSGAVRMA VGSLIELAFK VAAGELKNGF AVVRPPGHHA EESTAMGFCF FNTVAIAAKQ 720
LRLKLNVSKI LIVDWXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXVGSGP 780
GVGYNVNVAW TGGVDPPMGD VEYLTAFSTL VMPIAQLFSP DVVLVSAGFD AVEGXXXXXX 840
XXXXXXXXFG RLTQMLMELA GGRVVLALEG GHDLTAICDA SESCVSALLG DQXXXXXXXX 900
XXXXXXXXXX XXXXXXXXXX EHWPSLQKMH HNVSPSLLDG QQGSPSQSEV AARKEEAETV 960
SAMASLTVDV TQAGSASVTM ETSRSTDEPM EEEPVL 996
Nucleotide Sequence
(Fasta)
GTGTGTGACG CTGAGGGCCT GTGTTCCCCA GCCCCGGTGG ACCTGCGTAT GGAGCCCAGG 60
TCGGGGGCCC TCCCGGCAGG GGGCCCTGCC GTCGGGGTGG ACGCGGGCCA GCGGGAGCAG 120
CGGCTGCAGC AGGAGCTGGA GGCGCTGAAG AAGAGCCAGG AGCTGCAGAA ACAACGGCTG 180
TTCGCCGACT TCCAGAAGCA GCATGAGGTC CTGACCCGGC AGCACGAGGC GCAGCTGCAG 240
GAGCACCTCA AGGGTGCCAT CGCCAGTTCT GAGGTGAAGT TGAAGCTTCA GGAATTTCTG 300
CTGAACAAGA AAGAACCTGC TATCNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 360
NGTAGGGGGA TCTCTCTGGA CCAGCGGTCC CCCTCCTACA GACTGCCCCC CCTGCTGGCC 420
TGCGATGGGA AGGACGACTT CCCACTCCGC AAGACCGCCT CGGAGCCTAA CCTGAAGGTG 480
CGCTCGCGGC TGAAGCAGAA GGTGGCGGAG CGGCGCAGCA GTCCGCTGCT CCGCAGGAAG 540
GACGGGACCA TCATCAGCAC CTTCAAGAAG AGGGCGGTGG AGATATCTGT CTGCCCCCTA 600
GTGGCGGCTC TGAGCTCCAG CGCCCCGGGC TCCGGGCCCA GCAGCCCCAA CAGCTCCACC 660
ACCGCCATCG CCAACGGCAA CACCGGATCA GTGCCCAACA TCCAGACGGA GCTCCGCTCT 720
CTGCACCAGA CCCTGGGGGG CGACGGCGGG GGGCCCAGCC TGCTGCTCTA CACCTCTCCC 780
TCCCTGCCCA ACATCTCCTT GGGCCTGCCC GCCATCACGG TTCCTCAGAA GCTGACGAGC 840
CACCAGGAGG CGGAGATCCA GGCCGTCCAA TCCCTGCGAG GGGGTGGAGC CCTGACAGGG 900
AACTTCCTCT CCACTTCATG TCTGCCAGCA GGGACGGGTC ATGATGGGGA CAGCCCCCAG 960
GCCACGCCCC CCAGCTCCCA GGCTCCTCCC CCTAGTGCTC ACTCCTCCCT CCTGCAGCAC 1020
GTCCTGCTGC TGGAGCAGGC CAGGCAGCAG AGCGCCGCCC TGCTGGCCCT AGTTCCCATG 1080
TACAGCCAGT CGCCGTTGGT TACAGCAGAG AGGGGTATGT CGTCGGGGAG GGGCGTGGCC 1140
TTGGGCCGGG CCGTCAACAA GCTGCCACGC CATAGGCCAC TCGCTCGTAC CCAGAGTGCA 1200
CCTCTTCCCC AGACCCCCCA GGCCCTCCAG CAGCTGGTGG TTCAGCAACA GCACCAGCAC 1260
TTCCTCGAGA AGCACCGCTA CCTACACAAC AAGGTAATCT TAGCCAAGGG GGCGGAGATC 1320
GCCAGGCCTC CGCCCACTCA CCCAGAGGAG ACGGAGGAGG AGTTAACAGA GACCAATGAC 1380
ATGCAAGAGG AGGAGAGCAC GGAGAGCGAG CTGGACGAGG AGGAGGAGGA GGAGGAGGAG 1440
GAGCAGGAGT ATGATGAAGA TNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1500
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1560
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1620
NNNNNNNNNN NNNNNNNNNN NNNNNNNNGG CTGGTGTATG ACAGCCTGAT GCTGAAGCAT 1680
CAGTGTGTGT GTGGGAACAC ACAGATCCAC CCGGAGCACG CAGGCCGTGT CCAGAGCATC 1740
TGGTCGCGGC TGCAGGAGAC CGGGCTGCTG ACGCGTTGTG AGAGGGTCCG GGGGCGAAAG 1800
GCCACGCTGG ACGAGGTCCG GACGGTCCAC TCTGAGTTCC ACACGCTGCT CTACGGAACC 1860
AGCCCCTTAA ACCGCCACAA ACTGGACCAC AAGAAGATAC TGGGTCCAAT CAGCAACAAG 1920
ATGTATGCAC AGCTGCCCTG CGGCGGGATA GGGGTGGACA GTGACACCGT GTGGAACGAG 1980
ATGCATTCCT CCGGCGCCGT CCGGATGGCG GTGGGGTCGC TCATAGAGCT GGCCTTCAAG 2040
GTGGCAGCCG GGGAGCTGAA GAACGGCTTC GCTGTTGTCC GCCCCCCGGG TCATCATGCT 2100
GAGGAGTCCA CCGCCATGGG CTTCTGCTTC TTCAACACGG TGGCCATCGC AGCCAAGCAG 2160
CTCCGACTGA AGCTCAACGT CAGCAAGATC CTCATCGTGG ACTGGNNNNN NNNNNNNNNN 2220
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2280
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNGTGGG CTCTGGTCCT 2340
GGGGTGGGCT ATAACGTGAA CGTGGCCTGG ACCGGGGGGG TGGACCCCCC TATGGGGGAC 2400
GTTGAGTACC TGACCGCCTT CAGTACTCTG GTGATGCCGA TCGCCCAGCT CTTCAGTCCA 2460
GACGTGGTCC TCGTCTCCGC CGGCTTCGAC GCCGTCGAGG GANNNNNNNN NNNNNNNNNN 2520
NNNNNNNNNN NNNNNNNNNN NNGTTTCGGC AGGTTAACCC AGATGCTGAT GGAGCTGGCG 2580
GGGGGGAGGG TGGTGCTGGC GTTGGAGGGG GGTCACGACC TCACCGCCAT CTGTGACGCA 2640
TCAGAATCCT GCGTCTCTGC TCTGTTGGGC GACCAGNNNN NNNNNNNNNN NNNNNNNNNN 2700
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNGT 2760
GAGCACTGGC CGAGTCTGCA GAAGATGCAT CACAACGTCT CTCCCTCCCT ATTGGATGGC 2820
CAGCAGGGCT CTCCGAGCCA ATCAGAAGTG GCGGCTCGCA AGGAGGAGGC GGAGACTGTG 2880
AGTGCCATGG CGTCGTTGAC CGTGGACGTC ACGCAGGCCG GCTCCGCCTC CGTCACCATG 2940
GAAACCAGCA GGTCCACAGA TGAGCCAATG GAGGAAGAGC CTGTCTTGTA G 2992
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orn-0072 ENSONIP00000007998.1 Oreochromis niloticus 67 5e-170 595
WERAM-Xim-0214 ENSXMAP00000017502.1 Xiphophorus maculatus 66 9e-168 588
WERAM-Pof-0205 ENSPFOP00000017061.2 Poecilia formosa 66 1e-167 587
WERAM-Ten-0172 ENSTNIP00000017010.1 Tetraodon nigroviridis 66 1e-164 578
WERAM-Gaa-0053 ENSGACP00000006953.1 Gasterosteus aculeatus 66 4e-164 576
WERAM-Tar-0138 ENSTRUP00000030067.1 Takifugu rubripes 65 7e-164 575
WERAM-Dar-0170 ENSDARP00000100072.2 Danio rerio 64 5e-160 562
WERAM-Anc-0037 ENSACAP00000004435.3 Anolis carolinensis 62 4e-155 546
WERAM-Leo-0130 ENSLOCP00000016135.1 Lepisosteus oculatus 64 1e-154 544
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 61 1e-152 538
WERAM-Caf-0149 ENSCAFP00000021172.4 Canis familiaris 61 5e-152 536
WERAM-Myl-0072 ENSMLUP00000005848.2 Myotis lucifugus 61 2e-151 534
WERAM-Aim-0213 ENSAMEP00000019373.1 Ailuropoda melanoleuca 61 4e-150 530
WERAM-Mum-0019 ENSMUSP00000102770.2 Mus musculus 61 3e-149 527
WERAM-Ict-0187 ENSSTOP00000016795.1 Ictidomys tridecemlineatus 61 5e-149 526
WERAM-Paa-0157 ENSPANP00000020771.1 Papio anubis 61 3e-148 523
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 62 5e-148 523
WERAM-Otg-0108 ENSOGAP00000009396.2 Otolemur garnettii 62 1e-147 521
WERAM-Chs-0039 ENSCSAP00000014557.1 Chlorocebus sabaeus 61 2e-147 521
WERAM-Mam-0051 ENSMMUP00000008945.2 Macaca mulatta 62 2e-147 520
WERAM-Dio-0163 ENSDORP00000015416.1 Dipodomys ordii 61 3e-147 520
WERAM-Hos-0075 ENSP00000468004.1 Homo sapiens 62 3e-147 520
WERAM-Fec-0025 ENSFCAP00000002029.3 Felis catus 61 4e-147 520
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 62 4e-147 520
WERAM-Pes-0126 ENSPSIP00000015149.1 Pelodiscus sinensis 62 4e-147 520
WERAM-Ran-0140 ENSRNOP00000052059.4 Rattus norvegicus 61 6e-147 519
WERAM-Dan-0156 ENSDNOP00000017844.1 Dasypus novemcinctus 61 7e-147 519
WERAM-Caj-0108 ENSCJAP00000018977.1 Callithrix jacchus 61 8e-147 518
WERAM-Bot-0149 ENSBTAP00000053450.2 Bos taurus 61 8e-147 518
WERAM-Ova-0067 ENSOARP00000007394.1 Ovis aries 61 1e-146 518
WERAM-Poa-0072 ENSPPYP00000009379.1 Pongo abelii 61 1e-146 518
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 61 2e-146 517
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 61 2e-146 517
WERAM-Eqc-0174 ENSECAP00000019543.1 Equus caballus 61 2e-146 517
WERAM-Tut-0123 ENSTTRP00000009926.1 Tursiops truncatus 61 3e-146 517
WERAM-Sus-0129 ENSSSCP00000018401.2 Sus scrofa 61 2e-145 514
WERAM-Mup-0103 ENSMPUP00000009452.1 Mustela putorius furo 63 1e-142 504
WERAM-Loa-0216 ENSLAFP00000022496.1 Loxodonta africana 59 1e-141 501
WERAM-Cap-0214 ENSCPOP00000014276.1 Cavia porcellus 61 2e-141 501
WERAM-Fia-0119 ENSFALP00000010264.1 Ficedula albicollis 56 4e-141 500
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 58 1e-140 498
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 58 2e-140 498
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 58 2e-140 497
WERAM-Xet-0027 ENSXETP00000007313.3 Xenopus tropicalis 57 6e-140 496
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 58 3e-139 494
WERAM-Nol-0057 ENSNLEP00000006711.1 Nomascus leucogenys 58 2e-137 487
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 58 4e-137 486
WERAM-Lac-0155 ENSLACP00000018356.1 Latimeria chalumnae 56 5e-135 479
WERAM-Pat-0158 ENSPTRP00000032389.5 Pan troglodytes 55 2e-134 478
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 57 2e-134 478
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 55 2e-134 477
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 57 5e-134 476
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 56 3e-131 467
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 62 1e-127 455
WERAM-Orla-0013 ENSORLP00000001341.1 Oryzias latipes 52 8e-127 452
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 55 2e-126 451
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 53 6e-122 436
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 51 2e-120 431
WERAM-Mae-0145 ENSMEUP00000015025.1 Macropus eugenii 54 8e-120 429
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 52 4e-109 393
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 49 6e-108 389
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 43 3e-102 370
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 56 1e-89 329
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 41 9e-79 292
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 42 5e-76 283
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 57 1e-70 266
WERAM-Sem-0010 EFJ19764 Selaginella moellendorffii 35 4e-51 201
WERAM-Brr-0068 Bra012984.1-P Brassica rapa 37 7e-51 200
WERAM-Bro-0134 Bo7g098310.1 Brassica oleracea 37 8e-51 200
WERAM-Thc-0031 EOY22062 Theobroma cacao 35 1e-50 199
WERAM-Php-0085 PP1S34_252V6.1 Physcomitrella patens 35 2e-50 198
WERAM-Arl-0149 scaffold_802745.1 Arabidopsis lyrata 35 2e-49 195
WERAM-Art-0147 AT5G61070.1 Arabidopsis thaliana 36 4e-49 194
WERAM-Lep-0079 LPERR07G18450.1 Leersia perrieri 35 1e-48 192
WERAM-Ori-0088 BGIOSGA026083-PA Oryza indica 35 1e-48 192
WERAM-Ors-0072 OS07T0602200-01 Oryza sativa 35 1e-48 192
WERAM-Orr-0082 ORUFI07G22240.1 Oryza rufipogon 35 1e-48 192
WERAM-Orgl-0076 OGLUM07G21150.1 Oryza glumaepatula 35 1e-48 192
WERAM-Org-0078 ORGLA07G0164500.1 Oryza glaberrima 35 2e-48 192
WERAM-Orni-0078 ONIVA07G19970.1 Oryza nivara 35 2e-48 192
WERAM-Orb-0079 OBART07G21300.1 Oryza barthii 35 2e-48 192
WERAM-Orbr-0087 OB07G26850.1 Oryza brachyantha 34 3e-48 191
WERAM-Miv-0034 MVLG_04888T0 Microbotryum violaceum 34 3e-48 191
WERAM-Sol-0055 Solyc03g115150.2.1 Solanum lycopersicum 33 1e-47 189
WERAM-Brd-0010 BRADI1G22240.1 Brachypodium distachyon 35 1e-47 189
WERAM-Glm-0221 GLYMA17G08581.1 Glycine max 33 4e-47 187
WERAM-Orp-0076 OPUNC07G19850.1 Oryza punctata 34 4e-47 187
WERAM-Viv-0107 VIT_17s0000g07280.t01 Vitis vinifera 32 5e-47 187
Created Date 25-Jun-2016