WERAM Information

Tag Content
WERAM ID WERAM-Sah-0044
Ensembl Protein ID ENSSHAP00000005074.1
Gene Name HDAC4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSHAG00000004439.1 ENSSHAT00000005124.1 ENSSHAP00000005074.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 2.00e-122 408.6 560 800
HDAC Class-I 5.50e-29 101.9 608 764
Organism Sarcophilus harrisii
Domain Profile
  HDAC Class-II
           class-2.txt  85 ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvH 173
                           ++vdsd+i++e++s+ aarlavG+v+elv+kv++gelkngfavvRPPGHHaeest+mGFC+fn+va+aakllqq+l+v+kilivDwDvH
  ENSSHAP00000005074.1 560 VGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVNKILIVDWDVH 648
                           899************************************************************************************** PP
           class-2.txt 174 hGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlpiakeFkPdlvlv 259
                           hGnGtq++fy+dp+vly+SlHRyd+g+ffp  gsga+devg+g+g+gfnvN+a++ggl   mgd+eyl+afr+vv+p+a+eF Pd+vlv
  ENSSHAP00000005074.1 649 HGNGTQQAFYSDPNVLYISLHRYDDGNFFP--GSGAPDEVGTGPGVGFNVNMAFTGGLdppMGDTEYLTAFRTVVMPVANEFGPDVVLV 735
                           ******************************..********************************************************* PP
           class-2.txt 260 saGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
                           s+GfDa+eg  +plgg++ +akc+++ltkql++laggr+vl+lEGG++l+ai++a+ea+v+aLlg
  ENSSHAP00000005074.1 736 SSGFDAVEGhpTPLGGYNRSAKCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLG 800
                           *********9*****************************************************96 PP
  HDAC Class-I
           class-1.txt 132 hhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyav 217
                           hha  s   Gfcy n + +a   l++  + +++l +d d+hhG+g ++afy    v+ +s+h+y++ +ffPg+G  ++vg++ g  + v
  ENSSHAP00000005074.1 608 HHAEESTPMGFCYFNSVAIAAKLLQQrlNVNKILIVDWDVHHGNGTQQAFYSDPNVLYISLHRYDDgNFFPGSGAPDEVGTGPGVGFNV 696
                           *******************987777645789*********************************9746********************* PP
           class-1.txt 218 nvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslagD..rlgefnlsikghaecvk 279
                           n+ ++ g+d    D++y + f++v+ +v + f P++v++  G D++ g   +lg +n s k ++   k
  ENSSHAP00000005074.1 697 NMAFTGGLDppmgDTEYLTAFRTVVMPVANEFGPDVVLVSSGFDAVEGHptPLGGYNRSAKCFGYLTK 764
                           ***99998766669********************************9863369999999888876655 PP
Protein Sequence
(Fasta)		KTQHSSLDQS SPPQSGGPAA YNHPVLGMYD SKDDFPLRKT ASEPNLKLRS RLKQKVAERR 60
SSPLLRRKDG PVVTALKKRP LDVTDSACSS APGSGPSSPN NSSNNVSAEN GIAGSVASIQ 120
AETSLAHRLV TREGSVTQLP LYTSPSLPNI TLGLPATGPS SGASAQQEAE RLAIPALQQR 180
ISLFPGTHLT PYLSTTAAAL DRDGSGAHNP LLQHMVLLEQ PAQTPLVTGE LGRASRGAPG 240
METQSRGQGD EISISRHKKE LGLRGQRSSG STPSRPAPPR DGEMELERLK APAPLWANKH 300
KRDILGQNLK QXEMLPKPPE PARQHESHPE ETEEELREHQ ALLEEPSLQD PLPFTAGALT 360
QDGFPWLLFG RRGSSESSWP ALDCLLVLKN SSLIQFLPST NALLSGRNRS HENQNRYGGK 420
SPKPLGGTGA LGPHSSRPMA EVLLQEPPPL LAFSEHERWG GGPARHRARS REGLSSDSEP 480
VPGRPQLPWA RLPQGSRRPR AAPLPPGKCP LVHLSVLHQH GRHSLILLQM PPHPRLTSSF 540
PALGPDSARG RRSPWRGPRV GVDSDTIWNE VHSSGAARLA VGCVVELVFK VATGELKNGF 600
AVVRPPGHHA EESTPMGFCY FNSVAIAAKL LQQRLNVNKI LIVDWDVHHG NGTQQAFYSD 660
PNVLYISLHR YDDGNFFPGS GAPDEVGTGP GVGFNVNMAF TGGLDPPMGD TEYLTAFRTV 720
VMPVANEFGP DVVLVSSGFD AVEGHPTPLG GYNRSAKCFG YLTKQLMGLA GGRIVLALEG 780
GHDLTAICDA SEACVSALLG NELDPLPDKV LQQRSNANAI HSMEKVIETH SKYWRCLQRF 840
SSTVGYSLLE AQKCENEEAE TVSALASLSV GVKHAEKRSD DEPMEEEPPL
Nucleotide Sequence
(Fasta)		AAAACCCAGC ACAGTTCCCT GGACCAGAGC TCGCCCCCCC AGAGCGGGGG CCCCGCAGCC 60
TACAATCACC CGGTGCTGGG CATGTATGAC TCCAAAGACG ACTTTCCTCT TCGAAAAACA 120
GCCTCCGAAC CCAATCTGAA GCTCCGGTCC AGGCTGAAGC AGAAAGTGGC CGAGAGACGG 180
AGCAGCCCCC TGTTGCGCAG GAAAGACGGC CCGGTGGTGA CGGCTCTGAA GAAGCGCCCC 240
CTGGATGTCA CAGACTCGGC CTGCAGCAGC GCCCCCGGAT CGGGCCCCAG CTCCCCCAAC 300
AACAGCTCCA ACAACGTCAG TGCTGAGAAC GGCATCGCCG GCTCCGTCGC CAGCATCCAG 360
GCCGAGACCA GCCTGGCTCA TCGCCTGGTG ACCCGGGAAG GCTCCGTGAC GCAGCTGCCC 420
CTGTACACGT CACCCTCCCT GCCCAACATC ACGCTGGGCC TGCCCGCCAC CGGCCCTTCG 480
AGCGGGGCAT CCGCACAGCA GGAAGCTGAG AGATTGGCCA TCCCGGCCCT CCAGCAGCGC 540
ATCTCCCTCT TTCCCGGCAC CCACCTCACT CCCTACTTGA GCACGACGGC CGCCGCACTG 600
GACCGGGATG GGAGCGGCGC CCACAACCCC CTCCTGCAGC ACATGGTGCT CCTGGAGCAG 660
CCGGCACAGA CGCCCCTGGT CACAGGTGAG CTGGGCAGGG CCAGCCGGGG TGCTCCGGGG 720
ATGGAGACGC AGAGCAGGGG GCAGGGGGAT GAGATTTCCA TTTCCAGGCA TAAAAAGGAG 780
CTTGGACTTA GGGGTCAAAG GAGTTCTGGC AGTACCCCGT CACGCCCCGC CCCCCCAAGA 840
GATGGCGAAA TGGAGCTGGA GCGGCTGAAA GCGCCGGCCC CTCTTTGGGC CAACAAACAT 900
AAAAGAGATA TTTTGGGCCA GAACTTGAAA CAAGNGGAGA TGCTCCCCAA GCCCCCCGAG 960
CCCGCCCGCC AGCACGAGAG CCACCCCGAG GAGACGGAGG AGGAGCTGAG GGAGCACCAG 1020
GCGCTGCTGG AGGAGCCCTC CCTCCAGGAC CCCTTGCCCT TCACGGCCGG GGCGCTCACC 1080
CAGGATGGTT TTCCTTGGCT TTTGTTTGGG AGGAGAGGCT CTTCCGAATC CTCATGGCCC 1140
GCCTTGGATT GCCTTTTGGT GTTAAAGAAT AGTTCCTTAA TCCAGTTTTT ACCATCAACA 1200
AATGCATTAC TATCGGGCAG GAATCGCAGT CATGAGAACC AGAATCGATA CGGGGGAAAG 1260
AGCCCCAAAC CCCTTGGAGG TACTGGTGCT TTGGGTCCTC ACAGCAGCCG TCCGATGGCA 1320
GAAGTGCTGT TACAGGAGCC CCCGCCCCTG CTCGCCTTTT CTGAGCACGA GCGGTGGGGA 1380
GGGGGCCCCG CCAGGCACCG AGCACGGAGC CGGGAAGGCC TGAGTTCCGA TTCCGAGCCT 1440
GTGCCCGGCA GGCCCCAATT GCCGTGGGCT CGGCTGCCCC AGGGTTCTAG GCGGCCCAGG 1500
GCGGCCCCCC TGCCTCCTGG CAAATGTCCG CTCGTCCATC TGTCTGTCCT TCACCAACAC 1560
GGACGTCACA GCCTGATTCT GCTCCAGATG CCCCCCCACC CCCGGCTCAC GTCATCTTTC 1620
CCTGCATTGG GCCCAGACTC GGCCCGTGGG AGGCGCTCCC CATGGAGGGG ACCAAGAGTT 1680
GGGGTGGACA GCGACACCAT CTGGAACGAG GTCCACTCCT CCGGAGCGGC GCGCCTGGCC 1740
GTGGGCTGTG TGGTGGAGCT GGTCTTCAAG GTGGCCACCG GAGAGCTGAA GAACGGCTTC 1800
GCTGTTGTCC GGCCCCCCGG CCATCACGCC GAGGAGAGCA CGCCCATGGG CTTTTGCTAC 1860
TTTAATTCTG TGGCCATCGC GGCCAAGCTG CTCCAACAAC GGCTGAATGT GAACAAGATC 1920
CTCATCGTGG ACTGGGACGT CCATCATGGC AACGGGACCC AGCAGGCCTT CTACAGCGAC 1980
CCCAATGTAC TCTACATCTC GCTGCACCGC TACGATGACG GCAACTTCTT CCCGGGCAGC 2040
GGAGCCCCCG ACGAGGTCGG CACAGGACCC GGGGTTGGCT TCAATGTGAA CATGGCGTTT 2100
ACCGGTGGCT TGGACCCGCC CATGGGAGAC ACAGAATATC TAACTGCCTT CAGGACGGTC 2160
GTCATGCCGG TAGCCAATGA GTTCGGGCCC GACGTCGTGC TGGTATCCTC GGGCTTTGAC 2220
GCCGTGGAAG GCCACCCCAC ACCCTTGGGG GGCTACAACC GGTCGGCCAA GTGCTTCGGA 2280
TACCTGACCA AGCAGCTCAT GGGCCTGGCG GGCGGCCGCA TCGTCCTGGC CCTGGAAGGC 2340
GGCCATGACC TGACGGCCAT TTGCGATGCC TCGGAAGCCT GTGTTTCTGC TTTGCTGGGA 2400
AACGAGCTCG ACCCCCTCCC AGACAAGGTC TTGCAACAAA GGTCAAACGC CAACGCCATC 2460
CATTCTATGG AGAAAGTCAT CGAGACCCAC AGCAAGTACT GGCGCTGCCT GCAGCGCTTC 2520
TCCTCCACCG TGGGCTACTC CCTGCTTGAG GCGCAGAAGT GTGAGAATGA GGAAGCGGAG 2580
ACTGTCAGCG CCCTGGCCTC CCTGTCTGTG GGGGTCAAGC ACGCCGAGAA GAGGTCCGAT 2640
GATGAGCCCA TGGAAGAGGA GCCTCCCCTG TAG 2674
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 69 0.0 1038
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 69 0.0 1035
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 68 0.0 1033
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 66 0.0 1028
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 67 0.0 1011
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 66 0.0 1004
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 68 0.0 1002
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 67 0.0 991
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 66 0.0 987
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 67 0.0 987
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 67 0.0 985
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 67 0.0 985
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 67 0.0 983
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 65 0.0 979
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 66 0.0 972
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 66 0.0 964
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 65 0.0 959
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 66 0.0 958
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 65 0.0 957
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 66 0.0 954
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 65 0.0 948
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 66 0.0 947
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 66 0.0 944
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 66 0.0 935
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 63 0.0 917
WERAM-Dan-0037 ENSDNOP00000003826.3 Dasypus novemcinctus 64 0.0 904
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 62 0.0 904
WERAM-Leo-0082 ENSLOCP00000011105.1 Lepisosteus oculatus 61 0.0 888
WERAM-Poa-0116 ENSPPYP00000014905.2 Pongo abelii 63 0.0 880
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 61 0.0 876
WERAM-Mam-0041 ENSMMUP00000007984.2 Macaca mulatta 62 0.0 873
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 60 0.0 868
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 60 0.0 846
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 55 0.0 771
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 60 0.0 678
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 60 0.0 670
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 79 0.0 636
WERAM-Orn-0049 ENSONIP00000005635.1 Oreochromis niloticus 63 2e-167 587
WERAM-Tar-0063 ENSTRUP00000012899.1 Takifugu rubripes 72 2e-165 580
WERAM-Xim-0085 ENSXMAP00000008038.1 Xiphophorus maculatus 73 1e-164 578
WERAM-Gaa-0020 ENSGACP00000002894.1 Gasterosteus aculeatus 67 2e-164 577
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 84 2e-164 577
WERAM-Pof-0042 ENSPFOP00000003781.2 Poecilia formosa 72 8e-164 575
WERAM-Ten-0099 ENSTNIP00000000138.1 Tetraodon nigroviridis 71 5e-163 572
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 83 9e-161 565
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 64 9e-154 541
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 64 1e-148 525
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 65 1e-147 521
WERAM-Dio-0163 ENSDORP00000015416.1 Dipodomys ordii 64 4e-147 520
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 64 4e-147 520
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 64 2e-146 517
WERAM-Eqc-0174 ENSECAP00000019543.1 Equus caballus 64 6e-146 515
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 64 4e-145 513
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 62 6e-145 512
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 62 1e-144 511
WERAM-Mae-0145 ENSMEUP00000015025.1 Macropus eugenii 74 2e-143 507
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 72 2e-143 507
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 62 2e-136 484
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 66 3e-132 470
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 68 3e-130 463
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 57 7e-127 452
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 51 5e-121 433
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 67 1e-111 402
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 56 1e-95 348
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 53 5e-87 320
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 45 6e-87 319
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 44 3e-85 314
WERAM-Trr-0039 EGR46026 Trichoderma reesei 47 8e-68 256
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 45 2e-67 255
Created Date 25-Jun-2016