WERAM Information


Tag Content
WERAM ID WERAM-Orla-0199
Ensembl Protein ID ENSORLP00000022663.1
Gene Name hdac4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSORLG00000018092.1 ENSORLT00000022664.1 ENSORLP00000022663.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.20e-147 491.6 57 992
HDAC Class-I 1.50e-29 103.9 69 960
Organism Oryzias latipes
Domain Profile
  HDAC Class-II

           class-2.txt  11 lkhqaleenkekhpEkpeRiqailsrlqea..gllekleelka.rkatkeelqlvHseehvelletaeklekeeles..ltvdsd 90 
l+h+ + +++++ +R i + +++ +++ +l++ k +++ l+l H++e++e+ ++ e++++ +le+ +++ +
ENSORLP00000022663.1 57 LQHELVALKHKQQL---QRQLLIAEFQRQHeqLSRQHEAQLQEhIKHQQDLLALKHQQELLEHHRKMEQQRHDQLEKqqREQKLQ 138
34443333333322...22222222222221022223333444133344444556666666666666655555555522233333 PP
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84
+glvyd+ m khq++++n++ hpE+++Riq+i+srlqe+gl+ ++e +++rka+ eelq+vHse+hv+l++t+ ++ + ++
ENSORLP00000022663.1 653 TGLVYDSLMQKHQCICGNSTIHPEHAGRIQSIWSRLQETGLRAHCEVIRGRKASPEELQTVHSEAHVQLYGTNPLRQRLDCKTcissvn 741
79***********************************************************************6555556666999*** PP
class-2.txt 85 ..........ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvk 163
++vdsd+i++e++s++aarlavG+v+elv+kv++gelkngfavvRPPGHHaeest+mGFC+fn+va+aakllqq+l+v+
ENSORLP00000022663.1 742 pvfvrlpcggIGVDSDTIWNEVHSSSAARLAVGSVVELVFKVASGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVS 830
***************************************************************************************** PP
class-2.txt 164 kilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlpia 249
kilivDwDvHhGnGtq++fy dp+vlylSlHRyd+g+ffp gsga+devg+g+g+gfnvNva++ggl m daeylaafr+vv+pia
ENSORLP00000022663.1 831 KILIVDWDVHHGNGTQQAFYADPNVLYLSLHRYDDGNFFP--GSGAPDEVGSGAGVGFNVNVAFTGGLeppMADAEYLAAFRTVVMPIA 917
****************************************..*********************************************** PP
class-2.txt 250 keFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
keF+Pd+vlvs+GfDa++g plgg++vt kc+++lt+ql++laggr+vl+lEGG++l+ai++a+ea+++aLlg
ENSORLP00000022663.1 918 KEFAPDMVLVSSGFDAVDGhaPPLGGYKVTSKCFGYLTRQLMDLAGGRLVLALEGGHDLTAICDASEACISALLG 992
*******************999***************************************************96 PP

  HDAC Class-I

           class-1.txt  28 sltheLvlnyglskkleivkpkkasaeellkfhs........eeyieflkkvepenaeelske 82 
+l +L+++ ++ ++ + ++a+ +e +k+++ +e +e+ +k+e++ +++l+k+
ENSORLP00000022663.1 69 QLQRQLLIAEFQRQHEQLSRQHEAQLQEHIKHQQdllalkhqQELLEHHRKMEQQRHDQLEKQ 131
444444333333333333333333333333332211111111444444444444444444443 PP
class-1.txt 19 khpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae.......elskelkkf...nvgedc.Pvfd 96
hp r++ + + + + gl + e+++ +kas eel+++hse+++++ + + +++ + + ++g d+ + +
ENSORLP00000022663.1 673 IHPEHAGRIQSIWSRLQETGLRAHCEVIRGRKASPEELQTVHSEAHVQLYGTNPLRQRLdcktcisSVNPVFVRLpcgGIGVDSdTIWN 761
57777778888888888899999999999999999999999999999876443322222233333322222222222245555523666 PP
class-1.txt 97 glfey..cqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveeaf 179
++++ ++l G+ +e + k+ ++e + a+ G hha s Gfcy n + +a l++ + +++l +d d+hhG+g ++af
ENSORLP00000022663.1 762 EVHSSsaARLAVGSVVELVFKVASGELKngFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQrlNVSKILIVDWDVHHGNGTQQAF 849
66654114567788889999998887661245555444.*******************988777644678******************* PP
class-1.txt 180 yttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslagD. 262
y+ v+ +s+h+y++ +ffPg+G ++vg + g + vnv ++ g++ D +y + f++v+ ++ + f P++v++ G D++ g
ENSORLP00000022663.1 850 YADPNVLYLSLHRYDDgNFFPGSGAPDEVGSGAGVGFNVNVAFTGGLEppmaDAEYLAAFRTVVMPIAKEFAPDMVLVSSGFDAVDGHa 938
**************9746***********************98888543333*********************************8753 PP
class-1.txt 263 .rlgefnlsikghaecvkfvks 283
+lg ++++ k ++ + + +
ENSORLP00000022663.1 939 pPLGGYKVTSKCFGYLTRQLMD 960
3799999999988876665555 PP

Protein Sequence
(Fasta)
LKAKRLYRLS CLVDVSPAAL PSQVPPTSTA ILPMDLRVVD HHHKKKQTPP GHQEHQLQHE 60
LVALKHKQQL QRQLLIAEFQ RQHEQLSRQH EAQLQEHIKH QQDLLALKHQ QELLEHHRKM 120
EQQRHDQLEK QQREQKLQQL KNKERGQESA VASTEVKMRL QEFVLNKKKA LAQRNLNHCL 180
PSDLRYWYGK THHSSLDQSS PPQTALSAYN HPMLGTYDLK DDFPLRKTAS EPNLKLRSRL 240
KQKVAERRSS PLLRRKDGLI TTAKKRSLDV AEPACNSAPG SGPSSPNNSS SNIPNENGIP 300
ISSSHGEASL LQRLAAREGS VSQLSLYTSP SLPNITLGLP ATGPASAVVS GHQDGESHLA 360
LPALQQGIPL TPPFLPTAHL PSYLAPSALD REGPGGGTAG HNPLLQHVVL LEQGHSPMEK 420
HVQGALCHTV GLAGLPLPSP TVSKLVRGHR PLGRTQSAPL PQQPCGQAQA LQQLVVQQQH 480
QQFLEKHKQL FQQQQQHLIS KIMSKPGDPA SAVGSSASLP GRQHQSHPEE TEEELREHQG 540
LSSSSSSPSS APMQETRLLR AIKQEPPDPE EQEEREQRER HSEPDFLFKQ QQTLLLEQQR 600
IHQLRNYRAT IEDSSLPGTL AGKRPLFRTQ SSPASASLPM AVQESPVKHR FTTGLVYDSL 660
MQKHQCICGN STIHPEHAGR IQSIWSRLQE TGLRAHCEVI RGRKASPEEL QTVHSEAHVQ 720
LYGTNPLRQR LDCKTCISSV NPVFVRLPCG GIGVDSDTIW NEVHSSSAAR LAVGSVVELV 780
FKVASGELKN GFAVVRPPGH HAEESTPMGF CYFNSVAIAA KLLQQRLNVS KILIVDWDVH 840
HGNGTQQAFY ADPNVLYLSL HRYDDGNFFP GSGAPDEVGS GAGVGFNVNV AFTGGLEPPM 900
ADAEYLAAFR TVVMPIAKEF APDMVLVSSG FDAVDGHAPP LGGYKVTSKC FGYLTRQLMD 960
LAGGRLVLAL EGGHDLTAIC DASEACISAL LGNELEPIPE EVLQQRPNAN AVSSLEKVME 1020
THSKYWRSLQ RSASTLCCSL SEALQHDVEE AETVSAMASL SVANKHIGKR AEEEPMEEEA 1080
AM 1082
Nucleotide Sequence
(Fasta)
CTAAAGGCTA AACGACTTTA TCGCTTGTCT TGTTTAGTGG ATGTGAGCCC GGCAGCGCTG 60
CCCTCGCAGG TGCCCCCCAC TTCAACCGCC ATCCTTCCCA TGGACCTGCG CGTAGTGGAC 120
CACCACCACA AAAAAAAACA AACACCCCCA GGCCACCAGG AACACCAGCT GCAGCACGAG 180
CTGGTGGCTC TCAAGCACAA GCAGCAGCTC CAGAGGCAGC TCCTGATCGC AGAGTTTCAG 240
AGGCAGCACG AGCAGCTGTC CCGACAACAT GAAGCCCAGC TGCAGGAGCA CATTAAGCAC 300
CAACAGGATC TGCTGGCCCT CAAACATCAA CAGGAGCTGC TGGAGCATCA CAGGAAGATG 360
GAGCAGCAAC GCCACGACCA GCTGGAAAAG CAGCAGCGGG AACAGAAACT CCAGCAGCTC 420
AAAAACAAAG AGAGGGGACA AGAGAGTGCT GTGGCCAGCA CAGAGGTGAA GATGAGACTG 480
CAGGAGTTTG TGCTGAACAA GAAGAAGGCG CTGGCTCAGC GAAACCTAAA CCACTGTCTG 540
CCCAGTGACC TGCGCTACTG GTATGGAAAA ACTCACCACA GCTCTTTGGA CCAGAGCTCA 600
CCGCCCCAAA CAGCACTGTC AGCCTACAAC CACCCCATGC TCGGCACATA CGACTTGAAA 660
GACGACTTCC CTCTCCGAAA AACAGCGTCC GAGCCCAACC TGAAGCTTCG TTCCCGGCTA 720
AAGCAGAAGG TGGCGGAGCG CCGCAGCAGC CCTCTGCTCC GCAGGAAGGA TGGACTCATC 780
ACCACTGCCA AGAAGCGGTC CCTGGATGTG GCAGAACCTG CATGCAACAG TGCACCAGGC 840
TCTGGCCCCA GTTCCCCCAA CAACAGCTCC AGTAACATCC CGAACGAGAA TGGGATCCCG 900
ATCTCCAGCA GCCATGGAGA GGCCTCTCTG CTTCAGAGGT TGGCTGCAAG GGAGGGTTCA 960
GTCAGCCAAC TGTCTCTCTA CACCTCACCG TCTCTGCCCA ACATCACCTT AGGACTGCCA 1020
GCCACCGGGC CTGCCAGCGC TGTGGTGTCG GGACACCAAG ATGGCGAGAG TCATCTGGCG 1080
CTGCCTGCGT TGCAACAGGG CATTCCACTG ACTCCTCCTT TTCTTCCCAC CGCCCACCTG 1140
CCTTCCTACT TGGCACCTTC AGCGCTGGAC AGGGAGGGGC CTGGAGGGGG CACAGCTGGT 1200
CACAACCCCC TCCTTCAACA CGTGGTTCTG TTGGAGCAGG GCCACAGTCC AATGGAAAAA 1260
CATGTCCAGG GTGCGCTGTG TCATACAGTC GGCCTGGCTG GACTACCACT ACCGTCCCCC 1320
ACTGTATCCA AGCTGGTGCG GGGCCACCGT CCCCTGGGGA GGACCCAGTC GGCCCCTCTG 1380
CCCCAGCAGC CATGCGGACA AGCCCAGGCC CTGCAGCAGC TGGTAGTCCA GCAGCAACAC 1440
CAGCAGTTCC TGGAGAAGCA CAAACAACTT TTCCAACAGC AGCAGCAGCA CCTCATCAGC 1500
AAGATCATGT CCAAGCCTGG TGATCCGGCC TCGGCTGTGG GCTCCAGCGC ATCATTGCCT 1560
GGCAGGCAAC ACCAGAGCCA CCCAGAGGAG ACGGAAGAGG AGCTCAGGGA GCACCAGGGA 1620
CTTTCCTCAT CTTCGTCGTC ACCTTCCTCT GCTCCGATGC AGGAGACGAG GTTGCTAAGG 1680
GCCATCAAGC AGGAGCCACC AGATCCTGAA GAGCAGGAAG AAAGGGAGCA GAGGGAGAGG 1740
CACTCGGAGC CGGACTTCCT GTTCAAACAG CAGCAGACCC TACTTCTGGA GCAACAACGG 1800
ATTCACCAGC TTAGAAACTA CCGGGCCACT ATAGAAGACT CCAGCTTACC AGGCACCCTT 1860
GCTGGGAAGC GTCCTTTGTT CAGGACGCAG TCGTCTCCAG CCTCTGCTTC TCTCCCCATG 1920
GCAGTCCAGG AGTCGCCAGT CAAACACAGG TTTACGACAG GTCTGGTTTA TGACTCTTTG 1980
ATGCAGAAGC ATCAGTGCAT CTGTGGAAAC TCCACGATTC ATCCAGAACA CGCCGGCCGC 2040
ATTCAGAGCA TCTGGTCCCG GCTTCAGGAA ACGGGCCTCA GGGCACACTG TGAGGTCATC 2100
CGTGGAAGGA AAGCTTCTCC AGAGGAGCTG CAAACGGTGC ACTCTGAAGC CCACGTCCAG 2160
CTGTACGGAA CCAACCCTCT GAGACAGAGA CTAGACTGTA AGACATGCAT TAGTTCGGTG 2220
AATCCCGTGT TCGTGAGGTT ACCCTGCGGA GGCATCGGGG TGGACAGCGA CACCATTTGG 2280
AATGAGGTCC ATTCATCCAG CGCAGCTCGT CTGGCTGTCG GCTCTGTGGT GGAGCTGGTT 2340
TTCAAAGTGG CATCAGGAGA GCTGAAGAAC GGTTTCGCCG TGGTTCGACC ACCCGGACAC 2400
CACGCCGAGG AGAGCACGCC CATGGGTTTC TGCTATTTCA ACTCTGTCGC CATCGCAGCC 2460
AAACTCCTGC AGCAGAGACT GAACGTCAGC AAAATCCTCA TAGTGGACTG GGATGTTCAT 2520
CACGGCAACG GCACCCAGCA GGCTTTCTAC GCGGACCCCA ATGTCCTCTA CCTATCTCTG 2580
CATCGTTATG ACGACGGAAA CTTCTTTCCC GGCAGCGGAG CCCCTGATGA GGTGGGAAGC 2640
GGAGCAGGTG TAGGCTTCAA CGTAAACGTG GCCTTCACTG GAGGACTGGA ACCTCCCATG 2700
GCTGATGCAG AATATTTAGC TGCATTCAGA ACGGTGGTCA TGCCTATCGC CAAGGAGTTT 2760
GCCCCAGACA TGGTTCTGGT TTCTTCTGGC TTTGACGCAG TGGATGGACA TGCCCCACCT 2820
CTGGGAGGTT ACAAAGTCAC ATCCAAATGC TTCGGCTACC TGACCAGGCA GCTGATGGAT 2880
CTGGCAGGAG GTCGTCTGGT GCTTGCCTTG GAGGGGGGTC ATGACCTCAC AGCTATATGC 2940
GATGCCTCTG AAGCCTGCAT CTCCGCTCTG CTTGGTAATG AGTTGGAGCC CATTCCTGAA 3000
GAGGTGCTTC AGCAGAGACC AAACGCCAAC GCCGTCAGCT CTCTAGAGAA AGTGATGGAA 3060
ACCCACAGTA AATACTGGCG CTCCCTGCAG CGCTCTGCCT CCACCCTCTG CTGTTCCTTA 3120
AGTGAAGCCC TGCAGCATGA CGTCGAAGAA GCTGAAACCG TCTCAGCCAT GGCCTCACTG 3180
TCTGTGGCCA ACAAGCACAT TGGAAAGAGA GCTGAAGAGG AGCCTATGGA AGAGGAAGCT 3240
GCAATGTAA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orn-0049 ENSONIP00000005635.1 Oreochromis niloticus 81 0.0 1490
WERAM-Pof-0029 ENSPFOP00000001978.1 Poecilia formosa 81 0.0 1489
WERAM-Xim-0022 ENSXMAP00000002092.1 Xiphophorus maculatus 82 0.0 1477
WERAM-Tar-0063 ENSTRUP00000012899.1 Takifugu rubripes 83 0.0 1449
WERAM-Gaa-0020 ENSGACP00000002894.1 Gasterosteus aculeatus 82 0.0 1426
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 73 0.0 1321
WERAM-Leo-0082 ENSLOCP00000011105.1 Lepisosteus oculatus 72 0.0 1296
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 69 0.0 1216
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 68 0.0 1209
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 68 0.0 1205
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 68 0.0 1196
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 67 0.0 1195
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 67 0.0 1192
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 68 0.0 1189
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 67 0.0 1188
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 67 0.0 1187
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 66 0.0 1187
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 68 0.0 1185
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 66 0.0 1185
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 66 0.0 1182
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 68 0.0 1178
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 67 0.0 1176
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 67 0.0 1170
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 66 0.0 1168
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 67 0.0 1165
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 67 0.0 1164
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 66 0.0 1159
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 68 0.0 1147
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 62 0.0 1144
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 64 0.0 1142
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 64 0.0 1141
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 65 0.0 1136
WERAM-Dan-0037 ENSDNOP00000003826.3 Dasypus novemcinctus 65 0.0 1121
WERAM-Ten-0099 ENSTNIP00000000138.1 Tetraodon nigroviridis 67 0.0 1109
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 68 0.0 1109
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 63 0.0 1104
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 64 0.0 1096
WERAM-Poa-0116 ENSPPYP00000014905.2 Pongo abelii 64 0.0 1090
WERAM-Mam-0041 ENSMMUP00000007984.2 Macaca mulatta 63 0.0 1088
WERAM-Dio-0038 ENSDORP00000004330.1 Dipodomys ordii 58 0.0 945
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 66 0.0 814
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 66 0.0 807
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 71 0.0 783
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 74 0.0 770
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 64 0.0 736
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 69 0.0 687
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 68 0.0 675
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 68 0.0 662
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 68 0.0 657
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 67 0.0 652
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 67 0.0 652
WERAM-Eqc-0153 ENSECAP00000016533.1 Equus caballus 71 0.0 651
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 66 0.0 651
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 70 0.0 650
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 69 0.0 649
WERAM-Mae-0085 ENSMEUP00000008564.1 Macropus eugenii 64 2e-177 620
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 65 9e-176 615
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 71 5e-174 609
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 65 4e-168 590
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 72 1e-157 555
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 58 8e-152 535
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 62 5e-146 516
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 69 5e-128 456
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 49 2e-125 447
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 53 8e-125 446
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 47 2e-114 411
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 52 6e-87 320
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 43 1e-81 302
WERAM-Bro-0168 Bo9g014470.1 Brassica oleracea 43 5e-81 300
WERAM-Brr-0181 Bra035942.1-P Brassica rapa 43 6e-81 300
WERAM-Sol-0055 Solyc03g115150.2.1 Solanum lycopersicum 40 1e-78 292
Created Date 25-Jun-2016