WERAM Information

Tag Content
WERAM ID WERAM-Pot-0007
Ensembl Protein ID POPTR_0001s22550.1
Gene Name POPTR_0001s22550g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0001s22550 POPTR_0001s22550.1 POPTR_0001s22550.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.10e-14 55 66 153
Organism Populus trichocarpa
Domain Profile
  HDAC Class-I
         class-1.txt 159 hkrvlyididlhhGDgveeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePea 249
                          k+v+ idid+ +G+g  e fy tdr +tvs+h  +        +       +g  y +nvPl dg  D+ ye  ++++i + i+ feP++
  POPTR_0001s22550.1  66 CKKVVAIDIDVIYGNGTAEGFYRTDRALTVSLHMNNG-------S------WDGFGYNLNVPLPDGTGDRGYEYAMNKLIVPAIHKFEPDM 143
                         689******************************8665.......2......2333399********************************* PP
         class-1.txt 250 vvlqcGaDsl 259
                         +vl +G Ds 
  POPTR_0001s22550.1 144 IVLVVGQDSS 153
                         ********95 PP
Protein Sequence
(Fasta)		FAKYIDELFQ ADKQGGKVIC AGTFLNPDLW DAALLAAGTT LSAMKHILDG HGKLAYALVR 60
LPDSGCKKVV AIDIDVIYGN GTAEGFYRTD RALTVSLHMN NGSWDGFGYN LNVPLPDGTG 120
DRGYEYAMNK LIVPAIHKFE PDMIVLVVGQ DSSAFIVKQI TRGGCLHIIQ GGGYHVTYSA 180
YCLHATLDSV LDLLQLLLCD PIAHYSEDEA FSVEVVGAIR KYHKDLVPFL IYDSYAHILL 240
KLRHATMETT SSFKMN 256
Nucleotide Sequence
(Fasta)		TTCGCAAAGT ACATAGATGA ACTATTTCAG GCAGATAAAC AAGGGGGAAA GGTGATTTGT 60
GCTGGAACTT TCTTAAATCC CGACTTATGG GATGCTGCAC TCCTGGCTGC TGGCACTACA 120
CTATCTGCAA TGAAGCACAT TCTTGATGGG CATGGAAAAC TTGCTTATGC ATTGGTTAGG 180
CTGCCTGATT CAGGGTGTAA AAAAGTTGTA GCTATTGACA TTGATGTTAT TTACGGCAAT 240
GGAACAGCAG AGGGATTCTA TCGGACAGAT AGAGCACTTA CTGTATCCCT TCATATGAAT 300
AATGGTTCAT GGGATGGTTT TGGCTACAAT TTGAATGTAC CTCTTCCTGA TGGGACGGGT 360
GACAGGGGAT ACGAGTATGC CATGAACAAA TTAATTGTCC CAGCTATTCA CAAATTTGAA 420
CCTGATATGA TAGTTTTGGT TGTCGGCCAA GATTCAAGTG CTTTCATAGT CAAGCAAATA 480
ACACGTGGCG GGTGCCTTCA TATCATCCAA GGAGGAGGAT ACCACGTCAC ATACTCAGCT 540
TACTGTCTTC ATGCAACGCT TGACAGTGTG CTGGACCTTC TACAGCTGCT ATTATGTGAT 600
CCCATTGCAC ATTACTCTGA GGATGAGGCT TTTTCTGTGG AAGTTGTTGG AGCCATCAGG 660
AAGTACCATA AAGACTTGGT TCCATTTTTA ATTTACGATT CATATGCACA TATACTTTTA 720
AAATTACGTC ATGCTACGAT GGAAACAACA TCAAGCTTTA AAATGAACTA G 772
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Prp-0067 EMJ06546 Prunus persica 55 8e-69 257
WERAM-Met-0052 AES67133 Medicago truncatula 55 3e-66 249
WERAM-Viv-0042 VIT_06s0080g00210.t01 Vitis vinifera 55 7e-66 247
WERAM-Mua-0091 GSMUA_Achr6P19520_001 Musa acuminata 54 2e-64 242
WERAM-Sol-0084 Solyc06g074080.2.1 Solanum lycopersicum 54 2e-63 239
WERAM-Lep-0054 LPERR05G14310.1 Leersia perrieri 53 1e-62 236
WERAM-Bro-0161 Bo8g112460.1 Brassica oleracea 52 2e-62 236
WERAM-Brr-0156 Bra031628.1-P Brassica rapa 52 4e-62 234
WERAM-Glm-0150 GLYMA12G31380.1 Glycine max 53 7e-62 234
WERAM-Art-0007 AT1G08460.1 Arabidopsis thaliana 52 5e-61 231
WERAM-Orbr-0063 OB05G25900.1 Oryza brachyantha 52 2e-60 229
WERAM-Sob-0125 Sb09g021720.1 Sorghum bicolor 52 2e-60 229
WERAM-Orr-0055 ORUFI05G19220.1 Oryza rufipogon 52 3e-60 228
WERAM-Orb-0053 OBART05G18100.1 Oryza barthii 52 3e-60 228
WERAM-Orgl-0054 OGLUM05G19120.1 Oryza glumaepatula 52 4e-60 228
WERAM-Ors-0049 OS05T0440250-01 Oryza sativa 52 4e-60 228
WERAM-Ori-0058 BGIOSGA017971-PA Oryza indica 52 4e-60 228
WERAM-Orl-0065 KN539375.1_FGP010 Oryza longistaminata 52 5e-60 228
WERAM-Brd-0045 BRADI2G24020.1 Brachypodium distachyon 52 5e-60 228
WERAM-Org-0053 ORGLA05G0156700.1 Oryza glaberrima 52 6e-60 228
WERAM-Orm-0052 OMERI05G15690.1 Oryza meridionalis 52 6e-60 227
WERAM-Sot-0016 PGSC0003DMT400015085 Solanum tuberosum 54 7e-60 227
WERAM-Tra-0017 Traes_1BL_B77909838.1 Triticum aestivum 52 1e-59 226
WERAM-Tru-0024 TRIUR3_12332-P1 Triticum urartu 51 2e-59 226
WERAM-Arl-0048 fgenesh2_kg.1__ 860__ AT1G08460.1 Arabidopsis lyrata 52 2e-59 226
WERAM-Sei-0083 Si022311m Setaria italica 52 4e-58 221
WERAM-Aet-0025 EMT04688 Aegilops tauschii 50 1e-57 220
WERAM-Orni-0050 ONIVA05G18980.1 Oryza nivara 53 4e-57 218
WERAM-Amt-0035 ERN16099 Amborella trichopoda 49 2e-56 216
WERAM-Orp-0051 OPUNC05G15950.1 Oryza punctata 53 1e-55 213
WERAM-Php-0020 PP1S142_41V6.1 Physcomitrella patens 47 4e-52 201
WERAM-Thc-0113 EOY33305 Theobroma cacao 62 3e-51 199
WERAM-Sem-0041 EFJ29828 Selaginella moellendorffii 43 1e-43 174
WERAM-Zem-0043 GRMZM2G056539_P01 Zea mays 53 5e-41 165
WERAM-Cae-0007 R06C1.1.2 Caenorhabditis elegans 34 2e-13 73.6
WERAM-Scp-0016 SPAC3G9.07c.1:pep Schizosaccharomyces pombe 42 3e-13 72.8
WERAM-Scj-0027 EEB08472 Schizosaccharomyces japonicus 34 6e-13 72.0
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 34 6e-13 72.0
WERAM-Osl-0036 ABP01312 Ostreococcus lucimarinus 37 6e-13 71.6
WERAM-Tum-0019 CAZ83494 Tuber melanosporum 34 6e-13 71.6
WERAM-Coi-0028 EAS30926 Coccidioides immitis 35 9e-13 71.2
WERAM-Cym-0029 CMS068CT Cyanidioschyzon merolae 38 1e-12 70.9
WERAM-Caa-0015 KGT70099 Candida albicans 37 1e-12 70.9
WERAM-Yal-0006 CAG81802 Yarrowia lipolytica 36 2e-12 70.1
WERAM-Pug-0033 EFP89819 Puccinia graminis 33 6e-12 68.6
WERAM-Chr-0011 EDP01149 Chlamydomonas reinhardtii 34 6e-12 68.6
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 34 6e-12 68.6
WERAM-Put-0019 PTTG_08313P0 Puccinia triticina 33 7e-12 68.2
WERAM-Eqc-0167 ENSECAP00000018023.1 Equus caballus 36 8e-12 68.2
WERAM-Crn-0023 AAW44291 Cryptococcus neoformans 39 8e-12 68.2
WERAM-Ran-0128 ENSRNOP00000071791.1 Rattus norvegicus 36 9e-12 67.8
WERAM-Pes-0041 ENSPSIP00000006305.1 Pelodiscus sinensis 36 1e-11 67.8
WERAM-Cii-0013 ENSCINP00000004801.3 Ciona intestinalis 31 1e-11 67.4
WERAM-Anc-0124 ENSACAP00000011701.2 Anolis carolinensis 36 1e-11 67.4
WERAM-Mum-0059 ENSMUSP00000037981.7 Mus musculus 36 1e-11 67.4
WERAM-Nol-0100 ENSNLEP00000011707.1 Nomascus leucogenys 36 1e-11 67.4
WERAM-Anp-0042 ENSAPLP00000004660.1 Anas platyrhynchos 36 1e-11 67.4
WERAM-Meg-0022 ENSMGAP00000001598.1 Meleagris gallopavo 36 1e-11 67.4
WERAM-Gaga-0024 ENSGALP00000004141.3 Gallus gallus 36 1e-11 67.4
WERAM-Otg-0013 ENSOGAP00000000543.2 Otolemur garnettii 36 1e-11 67.0
WERAM-Kop-0017 CAY69921 Komagataella pastoris 34 1e-11 67.0
WERAM-Ova-0007 ENSOARP00000000868.1 Ovis aries 36 1e-11 67.0
WERAM-Tag-0179 ENSTGUP00000015405.1 Taeniopygia guttata 36 2e-11 67.0
WERAM-Sus-0109 ENSSSCP00000015310.2 Sus scrofa 36 2e-11 67.0
WERAM-Poa-0142 ENSPPYP00000017772.1 Pongo abelii 36 2e-11 67.0
WERAM-Paa-0044 ENSPANP00000001672.1 Papio anubis 36 2e-11 67.0
WERAM-Pat-0142 ENSPTRP00000029652.3 Pan troglodytes 36 2e-11 67.0
WERAM-Orc-0086 ENSOCUP00000007738.2 Oryctolagus cuniculus 36 2e-11 67.0
WERAM-Ocp-0150 ENSOPRP00000015465.1 Ochotona princeps 36 2e-11 67.0
WERAM-Myl-0096 ENSMLUP00000007910.2 Myotis lucifugus 36 2e-11 67.0
WERAM-Mod-0086 ENSMODP00000013319.2 Monodelphis domestica 36 2e-11 67.0
WERAM-Ict-0140 ENSSTOP00000014542.2 Ictidomys tridecemlineatus 36 2e-11 67.0
WERAM-Hos-0198 ENSP00000302967.3 Homo sapiens 36 2e-11 67.0
WERAM-Gog-0182 ENSGGOP00000015976.2 Gorilla gorilla 36 2e-11 67.0
WERAM-Cap-0155 ENSCPOP00000012861.2 Cavia porcellus 36 2e-11 67.0
WERAM-Caf-0075 ENSCAFP00000030390.2 Canis familiaris 36 2e-11 67.0
WERAM-Caj-0192 ENSCJAP00000033421.2 Callithrix jacchus 36 2e-11 67.0
WERAM-Aim-0114 ENSAMEP00000011012.1 Ailuropoda melanoleuca 36 2e-11 67.0
WERAM-Sah-0124 ENSSHAP00000012846.1 Sarcophilus harrisii 36 2e-11 67.0
WERAM-Mup-0085 ENSMPUP00000008127.1 Mustela putorius furo 36 2e-11 67.0
WERAM-Mae-0008 ENSMEUP00000000621.1 Macropus eugenii 36 2e-11 67.0
WERAM-Mam-0105 ENSMMUP00000016525.1 Macaca mulatta 36 2e-11 67.0
WERAM-Tas-0075 ENSTSYP00000007464.1 Tarsius syrichta 36 2e-11 67.0
WERAM-Fec-0077 ENSFCAP00000006409.3 Felis catus 36 2e-11 67.0
WERAM-Dan-0065 ENSDNOP00000006447.2 Dasypus novemcinctus 36 2e-11 67.0
WERAM-Chh-0070 ENSCHOP00000007333.1 Choloepus hoffmanni 36 2e-11 67.0
WERAM-Fia-0044 ENSFALP00000003005.1 Ficedula albicollis 36 2e-11 67.0
WERAM-Xet-0020 ENSXETP00000005840.3 Xenopus tropicalis 36 2e-11 67.0
WERAM-Ptv-0171 ENSPVAP00000014750.1 Pteropus vampyrus 36 2e-11 67.0
WERAM-Tub-0054 ENSTBEP00000006507.1 Tupaia belangeri 36 2e-11 66.6
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 33 2e-11 66.6
WERAM-Orla-0093 ENSORLP00000011294.1 Oryzias latipes 33 2e-11 66.6
WERAM-Orn-0192 ENSONIP00000019932.1 Oreochromis niloticus 33 2e-11 66.6
WERAM-Xim-0005 ENSXMAP00000000863.1 Xiphophorus maculatus 33 2e-11 66.2
WERAM-Pof-0043 ENSPFOP00000003698.2 Poecilia formosa 33 3e-11 66.2
WERAM-Tar-0077 ENSTRUP00000015206.1 Takifugu rubripes 33 3e-11 66.2
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 31 3e-11 66.2
WERAM-Dar-0082 ENSDARP00000054625.5 Danio rerio 33 3e-11 66.2
WERAM-Leo-0119 ENSLOCP00000014828.1 Lepisosteus oculatus 33 3e-11 66.2
WERAM-Ect-0079 ENSETEP00000008521.1 Echinops telfairi 31 3e-11 66.2
WERAM-Lab-0007 EDR12637 Laccaria bicolor 34 3e-11 66.2
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 32 3e-11 66.2
WERAM-Hov-0099 MLOC_71091.1 Hordeum vulgare 34 3e-11 65.9
WERAM-Ten-0120 ENSTNIP00000013021.1 Tetraodon nigroviridis 32 4e-11 65.9
WERAM-Kll-0026 CAG98203 Kluyveromyces lactis 34 4e-11 65.9
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 31 4e-11 65.9
WERAM-Usm-0003 UM00661P0 Ustilago maydis 34 4e-11 65.5
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 31 4e-11 65.5
WERAM-Gaa-0203 ENSGACP00000024795.1 Gasterosteus aculeatus 32 5e-11 65.5
WERAM-Spr-0014 CBQ68077 Sporisorium reilianum 34 5e-11 65.5
WERAM-Gam-0015 ENSGMOP00000001496.1 Gadus morhua 32 7e-11 65.1
WERAM-Cag-0001 CAG57805 Candida glabrata 33 7e-11 65.1
WERAM-Tut-0018 ENSTTRP00000001520.1 Tursiops truncatus 30 7e-11 65.1
Created Date 25-Jun-2016