WERAM Information

Tag Content
WERAM ID WERAM-Sol-0084
Ensembl Protein ID Solyc06g074080.2.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc06g074080.2 Solyc06g074080.2.1 Solyc06g074080.2.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 4.70e-34 119.1 48 334
Organism Solanum lycopersicum
Domain Profile
  HDAC Class-I
         class-1.txt  19 khpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGas 109
                         khp    r++ + +++    +s  ++  + + a+++ell+fh++ey++ l + + +  +el            + +  g ++ + l +G++
  Solyc06g074080.2.1  48 KHPENSDRVKNMLSILKRGPISPFISWHHGRPAHVSELLSFHTQEYVNELIEADRNGGKELC---------GGTFLNPGSWHATLLAAGTT 129
                         67777777777777777777777777788888899999999999999988877777766655.........3444567788889999**** PP
         class-1.txt 110 leaakkLnkkeadiainw.aGGlhhakkseasGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkygeeff 198
                         l+a+k +++++ ++a        hha+ ++a G+c++n+  la++  l    ++v+ +did+h+G+g  e fy+ d+v+t+s+h  + ++ 
  Solyc06g074080.2.1 130 LSAMKLIIDGHGNVAYALvRPPGHHAQPTQADGYCFLNNAGLAVQLALDgGCRKVVVLDIDVHYGNGTAEGFYHFDKVLTISLHMNHGSWG 220
                         *************9987624567********************976555499********************************9999999 PP
         class-1.txt 199 Pg...tGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvk.... 282
                         P+    G +++ g+++g  y +n+Pl +g  D+ y   +++++ + ie feP+++vl +G Ds a D+ g   l+++g+ e+ + ++    
  Solyc06g074080.2.1 221 PShsqGGTIEELGEGEGFGYNLNIPLPNGTGDKGYGYAMQHLVVPAIEKFEPDMMVLVVGQDSSAFDPNGRQCLTMEGYREIGQTIRgman 311
                         97333699**********************************************************************9776555542222 PP
         class-1.txt 283 sf.nlpllvlGGGGYtlrnvaRc 304
                         ++ n  ll++  GGY ++  a c
  Solyc06g074080.2.1 312 KYsNGRLLIVQEGGYHVTYSAYC 334
                         677889*********99988877 PP
Protein Sequence
(Fasta)		MASSASQSLP SKNNLIHVFW DEGMLKHDTG RGVFDTGMDP GFLDVLEKHP ENSDRVKNML 60
SILKRGPISP FISWHHGRPA HVSELLSFHT QEYVNELIEA DRNGGKELCG GTFLNPGSWH 120
ATLLAAGTTL SAMKLIIDGH GNVAYALVRP PGHHAQPTQA DGYCFLNNAG LAVQLALDGG 180
CRKVVVLDID VHYGNGTAEG FYHFDKVLTI SLHMNHGSWG PSHSQGGTIE ELGEGEGFGY 240
NLNIPLPNGT GDKGYGYAMQ HLVVPAIEKF EPDMMVLVVG QDSSAFDPNG RQCLTMEGYR 300
EIGQTIRGMA NKYSNGRLLI VQEGGYHVTY SAYCLHATLE GVLNVSDPLL SDPIAYYPED 360
ESFPAKVIDA IKKYQREVVP FLRDA 385
Nucleotide Sequence
(Fasta)		AAAAAAAAAT AAACTATGAT TTTTGTTATT TTCAATCCAC AGGGGAGGAT GAATTATTTA 60
GAGTAAAAAA GAGTCAGAAG CATCAAAACA AAGTGGCCAC TATAGGGTAT TGGAAGCTTC 120
AAATTTGTCC ATGGCTTCTT CAGCATCACA ATCTTTACCA TCAAAAAACA ACCTTATTCA 180
TGTATTCTGG GACGAGGGTA TGCTGAAACA TGACACAGGA AGAGGTGTTT TCGACACAGG 240
AATGGACCCT GGTTTTCTTG ATGTTTTAGA AAAACACCCA GAAAATTCAG ACAGGGTTAA 300
AAACATGTTG TCTATTCTCA AAAGGGGTCC TATTTCACCT TTCATTTCTT GGCACCATGG 360
ACGCCCTGCT CACGTCTCTG AATTATTATC TTTTCACACC CAAGAATATG TAAATGAACT 420
AATTGAAGCT GATAGAAATG GCGGAAAAGA ATTATGTGGA GGGACATTCT TAAATCCTGG 480
GTCATGGCAC GCTACACTTC TTGCTGCTGG TACTACATTA TCGGCTATGA AGCTTATAAT 540
TGATGGACAT GGGAATGTCG CGTATGCGTT GGTCAGGCCA CCTGGTCATC ATGCACAACC 600
TACTCAAGCT GATGGGTATT GCTTCCTTAA CAATGCGGGT CTAGCTGTAC AACTGGCTTT 660
AGATGGTGGC TGTAGGAAGG TTGTTGTCCT TGACATCGAT GTTCATTACG GGAATGGAAC 720
AGCAGAAGGA TTTTATCATT TTGATAAGGT TCTTACTATC TCCCTTCATA TGAATCATGG 780
TTCTTGGGGC CCCTCTCATT CACAGGGTGG AACTATAGAG GAGCTCGGCG AAGGTGAAGG 840
TTTTGGGTAT AACCTGAATA TACCATTACC AAATGGAACC GGGGACAAAG GGTATGGCTA 900
CGCCATGCAA CATTTAGTTG TTCCTGCTAT CGAGAAATTT GAGCCTGATA TGATGGTTTT 960
GGTTGTTGGG CAGGACTCAA GTGCTTTTGA TCCAAATGGA AGACAATGCT TGACAATGGA 1020
AGGTTACAGA GAGATTGGGC AGACAATTCG TGGCATGGCA AACAAGTATA GCAATGGACG 1080
ACTCTTGATA GTCCAAGAAG GCGGATACCA TGTTACATAT TCAGCCTATT GTCTGCACGC 1140
GACTCTTGAA GGTGTGCTCA ATGTTTCAGA CCCTCTATTA TCTGATCCTA TCGCTTATTA 1200
TCCTGAAGAT GAATCATTTC CAGCCAAGGT AATCGATGCT ATCAAAAAAT ATCAAAGAGA 1260
AGTTGTACCT TTTCTTAGAG ATGCTTAGTT GGTATCTCAT TTCGTGTTTG CTTATGAGCT 1320
CAAACACTGG GCTGGCTCGT TTGGTGCGAG GGATAAGGAA ATAGTAATGG GATAAAAAAA 1380
AATGTTTGGT TGCCTTGTTT GGAATAAGTT ATCCCACCGT TTAATCATAG CGATGGAATA 1440
AGTTATCTCA TATACCTGGT GGGATAAGTT ATCCCAGATG AGCCCTATGT GGGATAGCTT 1500
GTTTCTAACC AAACAACCCC TTACGGTGTC CCAACAAGTC TCTGCTCAGT ACAACAATGT 1560
AATTTCATTA GTGGGGTCTG ACGGTATTAA ATGTAAAAAT TTCCCTTAAA TAATAATTTG 1620
TTAAATTGTA TTGAG 1636
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sot-0016 PGSC0003DMT400015085 Solanum tuberosum 93 0.0 683
WERAM-Pot-0100 POPTR_0009s02560.1 Populus trichocarpa 77 5e-166 580
WERAM-Prp-0067 EMJ06546 Prunus persica 76 1e-165 580
WERAM-Met-0052 AES67133 Medicago truncatula 77 3e-163 572
WERAM-Mua-0091 GSMUA_Achr6P19520_001 Musa acuminata 75 3e-161 565
WERAM-Lep-0054 LPERR05G14310.1 Leersia perrieri 75 1e-160 563
WERAM-Ors-0049 OS05T0440250-01 Oryza sativa 74 3e-159 558
WERAM-Ori-0058 BGIOSGA017971-PA Oryza indica 74 3e-159 558
WERAM-Glm-0150 GLYMA12G31380.1 Glycine max 75 3e-159 558
WERAM-Orgl-0054 OGLUM05G19120.1 Oryza glumaepatula 74 3e-159 558
WERAM-Orr-0055 ORUFI05G19220.1 Oryza rufipogon 74 4e-159 558
WERAM-Org-0053 ORGLA05G0156700.1 Oryza glaberrima 75 5e-159 557
WERAM-Viv-0042 VIT_06s0080g00210.t01 Vitis vinifera 81 3e-158 555
WERAM-Brd-0045 BRADI2G24020.1 Brachypodium distachyon 73 2e-157 552
WERAM-Sob-0125 Sb09g021720.1 Sorghum bicolor 73 2e-157 552
WERAM-Amt-0035 ERN16099 Amborella trichopoda 72 2e-155 545
WERAM-Tra-0017 Traes_1BL_B77909838.1 Triticum aestivum 73 3e-155 545
WERAM-Orl-0065 KN539375.1_FGP010 Oryza longistaminata 75 8e-155 543
WERAM-Orni-0050 ONIVA05G18980.1 Oryza nivara 75 2e-154 542
WERAM-Aet-0025 EMT04688 Aegilops tauschii 72 4e-154 541
WERAM-Sei-0083 Si022311m Setaria italica 72 1e-153 540
WERAM-Orbr-0062 OB05G25730.1 Oryza brachyantha 73 2e-153 539
WERAM-Brr-0156 Bra031628.1-P Brassica rapa 70 2e-152 535
WERAM-Bro-0161 Bo8g112460.1 Brassica oleracea 70 5e-152 534
WERAM-Art-0007 AT1G08460.1 Arabidopsis thaliana 71 7e-149 524
WERAM-Tru-0024 TRIUR3_12332-P1 Triticum urartu 72 7e-148 520
WERAM-Arl-0048 fgenesh2_kg.1__ 860__ AT1G08460.1 Arabidopsis lyrata 71 1e-147 520
WERAM-Orm-0052 OMERI05G15690.1 Oryza meridionalis 74 8e-146 514
WERAM-Php-0020 PP1S142_41V6.1 Physcomitrella patens 68 6e-139 491
WERAM-Orp-0051 OPUNC05G15950.1 Oryza punctata 66 4e-126 448
WERAM-Orb-0053 OBART05G18100.1 Oryza barthii 65 4e-123 438
WERAM-Thc-0113 EOY33305 Theobroma cacao 80 8e-123 437
WERAM-Sem-0041 EFJ29828 Selaginella moellendorffii 61 3e-118 422
WERAM-Zem-0043 GRMZM2G056539_P01 Zea mays 74 6e-108 388
WERAM-Hov-0039 MLOC_38610.1 Hordeum vulgare 75 1e-72 271
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 30 6e-32 135
WERAM-Cag-0018 CAG60803 Candida glabrata 30 7e-31 132
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 30 1e-30 131
WERAM-Aim-0139 ENSAMEP00000013236.1 Ailuropoda melanoleuca 30 1e-30 131
WERAM-Chr-0012 EDP07560 Chlamydomonas reinhardtii 32 2e-30 130
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 33 2e-30 130
WERAM-Mup-0158 ENSMPUP00000013557.1 Mustela putorius furo 31 6e-30 129
WERAM-Caa-0034 KGT64501 Candida albicans 29 7e-30 129
WERAM-Mod-0081 ENSMODP00000012731.2 Monodelphis domestica 29 8e-30 128
WERAM-Xet-0155 ENSXETP00000050501.3 Xenopus tropicalis 31 9e-30 128
WERAM-Pug-0031 EFP89333 Puccinia graminis 28 9e-30 128
WERAM-Ran-0201 ENSRNOP00000063689.2 Rattus norvegicus 29 1e-29 128
WERAM-Osl-0036 ABP01312 Ostreococcus lucimarinus 32 1e-29 128
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 29 2e-29 127
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 28 2e-29 127
WERAM-Eqc-0001 ENSECAP00000001121.1 Equus caballus 30 3e-29 127
WERAM-Fec-0031 ENSFCAP00000002366.3 Felis catus 31 3e-29 126
WERAM-Mum-0115 ENSMUSP00000033501.8 Mus musculus 29 3e-29 126
WERAM-Usm-0012 UM02102P0 Ustilago maydis 38 9e-29 125
WERAM-Kop-0012 CAY68916 Komagataella pastoris 29 1e-28 124
WERAM-Myl-0104 ENSMLUP00000008295.2 Myotis lucifugus 31 1e-28 124
WERAM-Caf-0161 ENSCAFP00000022990.3 Canis familiaris 30 1e-28 124
WERAM-Asg-0010 AAS51704 Ashbya gossypii 29 1e-28 124
WERAM-Drm-0028 FBpp0290988 Drosophila melanogaster 30 1e-28 124
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 31 1e-28 124
WERAM-Orc-0102 ENSOCUP00000008741.3 Oryctolagus cuniculus 29 1e-28 124
WERAM-Dar-0023 ENSDARP00000124246.1 Danio rerio 29 2e-28 124
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 28 2e-28 124
WERAM-Otg-0144 ENSOGAP00000012420.2 Otolemur garnettii 31 3e-28 123
WERAM-Yal-0023 CAG79971 Yarrowia lipolytica 30 3e-28 123
WERAM-Cap-0109 ENSCPOP00000008049.2 Cavia porcellus 31 4e-28 123
WERAM-Cae-0060 F41H10.6b Caenorhabditis elegans 29 5e-28 122
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 33 7e-28 122
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 29 7e-28 122
WERAM-Ict-0125 ENSSTOP00000012693.2 Ictidomys tridecemlineatus 28 9e-28 121
WERAM-Tar-0042 ENSTRUP00000010127.1 Takifugu rubripes 32 1e-27 121
WERAM-Ova-0124 ENSOARP00000012678.1 Ovis aries 28 1e-27 121
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 31 2e-27 120
WERAM-Prc-0036 ENSPCAP00000003334.1 Procavia capensis 29 2e-27 120
WERAM-Asm-0181 ENSAMXP00000017644.1 Astyanax mexicanus 33 2e-27 120
WERAM-Put-0014 PTTG_07163P0 Puccinia triticina 27 2e-27 120
WERAM-Ten-0019 ENSTNIP00000004593.1 Tetraodon nigroviridis 31 3e-27 120
WERAM-Dan-0022 ENSDNOP00000002136.3 Dasypus novemcinctus 28 3e-27 120
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 37 3e-27 120
WERAM-Chs-0158 ENSCSAP00000009365.1 Chlorocebus sabaeus 31 3e-27 120
WERAM-Mam-0153 ENSMMUP00000021637.2 Macaca mulatta 31 3e-27 119
WERAM-Paa-0049 ENSPANP00000006915.1 Papio anubis 31 4e-27 119
WERAM-Gog-0047 ENSGGOP00000004443.2 Gorilla gorilla 31 4e-27 119
WERAM-Sah-0012 ENSSHAP00000001165.1 Sarcophilus harrisii 30 4e-27 119
WERAM-Mae-0111 ENSMEUP00000010640.1 Macropus eugenii 30 4e-27 119
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 29 4e-27 119
WERAM-Sus-0177 ENSSSCP00000022636.1 Sus scrofa 30 4e-27 119
WERAM-Phn-0010 SNOT_01279 Phaeosphaeria nodorum 33 5e-27 119
WERAM-Hos-0047 ENSP00000365804.2 Homo sapiens 31 6e-27 119
WERAM-Anc-0082 ENSACAP00000007918.3 Anolis carolinensis 31 6e-27 119
WERAM-Bot-0122 ENSBTAP00000017618.5 Bos taurus 28 7e-27 119
WERAM-Coi-0028 EAS30926 Coccidioides immitis 35 8e-27 118
WERAM-Caj-0022 ENSCJAP00000004409.2 Callithrix jacchus 30 9e-27 118
WERAM-Loa-0047 ENSLAFP00000003196.3 Loxodonta africana 29 2e-26 117
WERAM-Tut-0056 ENSTTRP00000004443.1 Tursiops truncatus 30 2e-26 117
WERAM-Orn-0011 ENSONIP00000001061.1 Oreochromis niloticus 29 3e-26 117
WERAM-Xim-0160 ENSXMAP00000013063.1 Xiphophorus maculatus 29 3e-26 116
WERAM-Pof-0022 ENSPFOP00000001799.2 Poecilia formosa 29 5e-26 115
WERAM-Nol-0005 ENSNLEP00000000692.2 Nomascus leucogenys 31 1e-25 115
WERAM-Pat-0122 ENSPTRP00000025053.4 Pan troglodytes 31 1e-25 114
WERAM-Ptv-0077 ENSPVAP00000007213.1 Pteropus vampyrus 30 1e-25 114
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 32 1e-25 114
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 31 1e-25 114
WERAM-Poa-0196 ENSPPYP00000022747.2 Pongo abelii 28 2e-25 114
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 35 2e-25 114
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 37 5e-25 112
Created Date 25-Jun-2016