WERAM Information


Tag Content
WERAM ID WERAM-Chh-0070
Ensembl Protein ID ENSCHOP00000007333.1
Gene Name HDAC3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCHOG00000008290.1 ENSCHOT00000008312.1 ENSCHOP00000007333.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 9.50e-147 487.9 1 343
Organism Choloepus hoffmanni
Domain Profile
  HDAC Class-I

           class-1.txt  45 ivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhh 133
++kp +as++++++fhse+yi+fl++v+p+n++ ++k+l+ fnvg+dcPvf glfe+c+ +tGasl++a++Ln+k +diainwaGGlhh
ENSCHOP00000007333.1 1 VFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHH 89
689************************************************************************************** PP
class-1.txt 134 akkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlk 222
akk easG cyvnDiv++ilellk+h+rvlyidid+hhGDgv+eafy tdrvmtvsfhkyg++ffPgtGd+++vgae+g+yy++nvPl+
ENSCHOP00000007333.1 90 AKK-EASGICYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLR 177
*87.8************************************************************************************ PP
class-1.txt 223 dgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetav 311
dgidD+sy+++f++vi++v+++++P+++vlqcGaDsl +Drlg+fnlsi+gh+ecv++vksfn+pllvlGGGGYt+rnvaRcwtyet++
ENSCHOP00000007333.1 178 DGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSL 266
****************************************************************************************9 PP
class-1.txt 312 vl 313
++
ENSCHOP00000007333.1 267 LV 268
86 PP
class-1.txt 228 esyekifksviskv.ieafePeavvlqcGaDslagDrl 264
+++ +i +++ +++ + + P++ + ++ +D l+ Dr
ENSCHOP00000007333.1 306 QYLDQIRQTIFENLkMLNHAPSVQIHDVPSDLLTYDRT 343
66788888898887356799999999999999999996 PP

Protein Sequence
(Fasta)
VFKPYQASQH DMCRFHSEDY IDFLQRVSPT NMQGFTKSLN AFNVGDDCPV FPGLFEFCSR 60
YTGASLQGAT QLNNKICDIA INWAGGLHHA KKEASGICYV NDIVIGILEL LKYHPRVLYI 120
DIDIHHGDGV QEAFYLTDRV MTVSFHKYGN YFFPGTGDMY EVGAESGRYY CLNVPLRDGI 180
DDQSYKHLFQ PVINQVVDFY QPTCIVLQCG ADSLGCDRLG CFNLSIRGHG ECVEYVKSFN 240
IPLLVLGGGG YTVRNVARCW TYETSLLVEE AISEELPYSE YFEYFAPDFT LHPDVSTRIE 300
NQNSRQYLDQ IRQTIFENLK MLNHAPSVQI HDVPSDLLTY DRTDEADAEE RGPEENYSRP 360
EAPNEFFDGD HDNDKESDVE I 381
Nucleotide Sequence
(Fasta)
GTCTTCAAGC CATACCAGGC TTCCCAGCAT GACATGTGCC GCTTCCACTC CGAGGACTAC 60
ATAGATTTCC TGCAGAGAGT CAGCCCCACC AATATGCAAG GCTTCACCAA GAGCCTTAAT 120
GCCTTCAACG TGGGCGATGA CTGCCCAGTG TTTCCCGGGC TCTTTGAGTT CTGCTCCCGT 180
TACACAGGCG CATCTCTGCA AGGAGCAACC CAGCTGAACA ACAAGATCTG TGATATTGCC 240
ATTAATTGGG CTGGTGGTCT GCACCATGCC AAGAAGGAGG CCTCAGGCAT CTGCTATGTC 300
AATGACATTG TCATCGGCAT CCTGGAGCTG CTCAAGTACC ACCCTCGGGT GCTCTACATC 360
GATATTGACA TCCACCATGG TGATGGGGTT CAGGAAGCCT TCTACCTCAC TGACCGGGTC 420
ATGACAGTGT CCTTCCACAA ATACGGAAAT TACTTCTTCC CTGGCACAGG TGACATGTAT 480
GAAGTTGGAG CAGAAAGTGG CCGCTATTAC TGTCTCAATG TGCCCCTACG GGATGGCATC 540
GATGACCAGA GTTACAAGCA CCTTTTCCAG CCGGTTATCA ACCAAGTGGT GGACTTCTAC 600
CAACCCACAT GCATTGTGCT CCAGTGTGGT GCTGACTCTC TGGGCTGTGA TCGATTGGGC 660
TGCTTCAACC TCAGCATCCG AGGACATGGG GAGTGTGTAG AATACGTCAA GAGCTTCAAT 720
ATCCCTCTCC TGGTGTTAGG TGGAGGCGGT TATACTGTCC GGAATGTGGC CCGCTGCTGG 780
ACTTATGAGA CGTCATTGCT GGTAGAAGAG GCCATTAGTG AGGAGCTTCC CTATAGTGAA 840
TACTTCGAGT ACTTTGCCCC GGACTTCACG CTCCATCCAG ATGTCAGCAC CCGCATCGAA 900
AATCAGAACT CGCGCCAGTA TCTGGACCAG ATCCGCCAGA CAATCTTTGA GAACTTGAAG 960
ATGCTTAACC ATGCACCTAG TGTCCAGATT CATGATGTGC CCTCAGACCT CCTGACCTAT 1020
GACAGGACGG ATGAGGCTGA TGCAGAGGAA AGAGGTCCCG AGGAGAACTA CAGCAGGCCA 1080
GAGGCACCCA ATGAGTTCTT TGATGGAGAC CACGACAATG ACAAGGAAAG TGACGTCGAG 1140
ATTTAA 1147
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Nol-0100 ENSNLEP00000011707.1 Nomascus leucogenys 99 0.0 787
WERAM-Sus-0109 ENSSSCP00000015310.2 Sus scrofa 99 0.0 786
WERAM-Poa-0142 ENSPPYP00000017772.1 Pongo abelii 99 0.0 786
WERAM-Paa-0044 ENSPANP00000001672.1 Papio anubis 99 0.0 786
WERAM-Pat-0142 ENSPTRP00000029652.3 Pan troglodytes 99 0.0 786
WERAM-Orc-0086 ENSOCUP00000007738.2 Oryctolagus cuniculus 99 0.0 786
WERAM-Ocp-0150 ENSOPRP00000015465.1 Ochotona princeps 99 0.0 786
WERAM-Myl-0096 ENSMLUP00000007910.2 Myotis lucifugus 99 0.0 786
WERAM-Ict-0140 ENSSTOP00000014542.2 Ictidomys tridecemlineatus 99 0.0 786
WERAM-Hos-0198 ENSP00000302967.3 Homo sapiens 99 0.0 786
WERAM-Gog-0182 ENSGGOP00000015976.2 Gorilla gorilla 99 0.0 786
WERAM-Cap-0155 ENSCPOP00000012861.2 Cavia porcellus 99 0.0 786
WERAM-Caf-0075 ENSCAFP00000030390.2 Canis familiaris 99 0.0 786
WERAM-Caj-0192 ENSCJAP00000033421.2 Callithrix jacchus 99 0.0 786
WERAM-Aim-0114 ENSAMEP00000011012.1 Ailuropoda melanoleuca 99 0.0 786
WERAM-Mae-0008 ENSMEUP00000000621.1 Macropus eugenii 99 0.0 786
WERAM-Otg-0013 ENSOGAP00000000543.2 Otolemur garnettii 99 0.0 786
WERAM-Fec-0077 ENSFCAP00000006409.3 Felis catus 99 0.0 786
WERAM-Mup-0085 ENSMPUP00000008127.1 Mustela putorius furo 99 0.0 786
WERAM-Ova-0007 ENSOARP00000000868.1 Ovis aries 99 0.0 785
WERAM-Mum-0059 ENSMUSP00000037981.7 Mus musculus 99 0.0 785
WERAM-Sah-0124 ENSSHAP00000012846.1 Sarcophilus harrisii 99 0.0 784
WERAM-Eqc-0167 ENSECAP00000018023.1 Equus caballus 98 0.0 783
WERAM-Dan-0065 ENSDNOP00000006447.2 Dasypus novemcinctus 99 0.0 783
WERAM-Mod-0086 ENSMODP00000013319.2 Monodelphis domestica 97 0.0 774
WERAM-Meg-0022 ENSMGAP00000001598.1 Meleagris gallopavo 97 0.0 771
WERAM-Gaga-0024 ENSGALP00000004141.3 Gallus gallus 97 0.0 771
WERAM-Anp-0042 ENSAPLP00000004660.1 Anas platyrhynchos 97 0.0 769
WERAM-Fia-0044 ENSFALP00000003005.1 Ficedula albicollis 97 0.0 769
WERAM-Tag-0179 ENSTGUP00000015405.1 Taeniopygia guttata 97 0.0 768
WERAM-Pes-0041 ENSPSIP00000006305.1 Pelodiscus sinensis 96 0.0 767
WERAM-Anc-0124 ENSACAP00000011701.2 Anolis carolinensis 96 0.0 763
WERAM-Mam-0105 ENSMMUP00000016525.1 Macaca mulatta 99 0.0 762
WERAM-Xet-0020 ENSXETP00000005840.3 Xenopus tropicalis 94 0.0 756
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 94 0.0 756
WERAM-Leo-0119 ENSLOCP00000014828.1 Lepisosteus oculatus 93 0.0 746
WERAM-Dar-0082 ENSDARP00000054625.5 Danio rerio 93 0.0 743
WERAM-Orn-0192 ENSONIP00000019932.1 Oreochromis niloticus 92 0.0 743
WERAM-Orla-0093 ENSORLP00000011294.1 Oryzias latipes 92 0.0 741
WERAM-Pof-0043 ENSPFOP00000003698.2 Poecilia formosa 92 0.0 741
WERAM-Xim-0005 ENSXMAP00000000863.1 Xiphophorus maculatus 92 0.0 739
WERAM-Ten-0120 ENSTNIP00000013021.1 Tetraodon nigroviridis 92 0.0 738
WERAM-Gaa-0203 ENSGACP00000024795.1 Gasterosteus aculeatus 91 0.0 731
WERAM-Gam-0015 ENSGMOP00000001496.1 Gadus morhua 91 0.0 729
WERAM-Tut-0154 ENSTTRP00000013027.1 Tursiops truncatus 92 0.0 724
WERAM-Ran-0128 ENSRNOP00000071791.1 Rattus norvegicus 91 0.0 723
WERAM-Mim-0152 ENSMICP00000015894.1 Microcebus murinus 92 0.0 717
WERAM-Ptv-0171 ENSPVAP00000014750.1 Pteropus vampyrus 92 0.0 716
WERAM-Pem-0092 ENSPMAP00000009670.1 Petromyzon marinus 84 0.0 689
WERAM-Tub-0054 ENSTBEP00000006507.1 Tupaia belangeri 99 0.0 684
WERAM-Tas-0075 ENSTSYP00000007464.1 Tarsius syrichta 99 0.0 683
WERAM-Prc-0116 ENSPCAP00000010084.1 Procavia capensis 87 0.0 669
WERAM-Tar-0077 ENSTRUP00000015206.1 Takifugu rubripes 86 2e-178 622
WERAM-Loa-0085 ENSLAFP00000006680.3 Loxodonta africana 98 2e-177 619
WERAM-Cii-0013 ENSCINP00000004801.3 Ciona intestinalis 73 7e-174 607
WERAM-Cis-0077 ENSCSAVP00000016740.1 Ciona savignyi 72 4e-168 588
WERAM-Drm-0025 FBpp0078414 Drosophila melanogaster 64 5e-151 531
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 63 1e-134 477
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 63 2e-134 476
WERAM-Coi-0024 EAS33504 Coccidioides immitis 62 8e-134 474
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 61 2e-133 472
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 61 8e-133 470
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 60 4e-132 468
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 62 8e-132 467
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 60 2e-131 466
WERAM-Art-0082 AT3G44680.1 Arabidopsis thaliana 58 5e-131 464
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 65 1e-130 463
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 60 1e-130 463
WERAM-Bro-0059 Bo3g120880.1 Brassica oleracea 57 1e-130 463
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 59 2e-130 462
WERAM-Brr-0098 Bra019424.1-P Brassica rapa 57 3e-130 462
WERAM-Glm-0130 GLYMA11G19290.1 Glycine max 56 5e-130 461
WERAM-Met-0097 AES88434 Medicago truncatula 57 1e-129 459
WERAM-Arl-0024 fgenesh1_pg.C_scaffold_5000937 Arabidopsis lyrata 55 2e-129 459
WERAM-Sem-0137 EFJ33452 Selaginella moellendorffii 57 9e-129 457
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 62 1e-128 457
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 62 1e-128 456
WERAM-Ved-0020 EGY15146 Verticillium dahliae 61 1e-128 456
WERAM-Thc-0114 EOY33523 Theobroma cacao 56 2e-128 456
WERAM-Pot-0020 POPTR_0001s46430.1 Populus trichocarpa 57 2e-128 456
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 62 2e-128 456
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 56 3e-128 455
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 60 3e-128 455
WERAM-Caa-0018 KGT69072 Candida albicans 61 3e-128 455
WERAM-Zyt-0024 Mycgr3P51809 Zymoseptoria tritici 56 4e-128 455
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 60 7e-128 454
WERAM-Org-0044 ORGLA04G0087200.1 Oryza glaberrima 56 7e-128 454
WERAM-Kop-0004 CAY67954 Komagataella pastoris 56 8e-128 454
WERAM-Orni-0039 ONIVA04G09660.1 Oryza nivara 56 9e-128 454
WERAM-Ori-0051 BGIOSGA016344-PA Oryza indica 56 9e-128 454
WERAM-Orgl-0043 OGLUM04G11380.3 Oryza glumaepatula 56 9e-128 454
WERAM-Trv-0003 EHK19072 Trichoderma virens 58 2e-127 452
WERAM-Orbr-0052 OB04G18820.1 Oryza brachyantha 56 2e-127 452
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 59 3e-127 452
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 59 4e-127 451
WERAM-Amt-0048 ERN13133 Amborella trichopoda 55 4e-127 451
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 58 5e-127 451
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 58 1e-126 450
WERAM-Asg-0034 AAS54885 Ashbya gossypii 59 2e-126 449
WERAM-Orb-0042 OBART04G11700.1 Oryza barthii 56 4e-126 448
WERAM-Orr-0042 ORUFI04G12890.1 Oryza rufipogon 56 4e-126 448
WERAM-Chr-0011 EDP01149 Chlamydomonas reinhardtii 56 5e-126 448
WERAM-Zem-0071 GRMZM2G119703_P01 Zea mays 59 1e-125 447
WERAM-Trr-0017 EGR48353 Trichoderma reesei 59 1e-125 446
WERAM-Viv-0093 VIT_15s0021g00610.t01 Vitis vinifera 56 1e-125 446
WERAM-Sob-0086 Sb06g015420.1 Sorghum bicolor 58 2e-125 446
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 63 2e-125 446
WERAM-Cag-0003 CAG57932 Candida glabrata 59 2e-125 446
WERAM-Orp-0042 OPUNC04G09700.1 Oryza punctata 55 4e-125 445
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 61 4e-125 445
WERAM-Sol-0138 Solyc11g067020.1.1 Solanum lycopersicum 58 4e-125 445
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 58 4e-125 445
WERAM-Prp-0063 EMJ06433 Prunus persica 58 5e-125 444
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 53 9e-125 444
WERAM-Mua-0089 GSMUA_Achr6P17260_001 Musa acuminata 54 1e-124 443
WERAM-Tru-0028 TRIUR3_16261-P1 Triticum urartu 58 2e-124 442
WERAM-Sei-0035 Si010167m Setaria italica 58 3e-124 442
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 58 1e-123 440
WERAM-Aet-0101 EMT12816 Aegilops tauschii 58 1e-123 440
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 55 2e-123 439
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 60 3e-123 439
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 60 3e-123 438
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 62 1e-122 436
Created Date 25-Jun-2016