WERAM Information

Tag Content
WERAM ID WERAM-Sob-0125
Ensembl Protein ID Sb09g021720.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb09g021720 Sb09g021720.1 Sb09g021720.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 3.50e-37 129.5 52 339
Organism Sorghum bicolor
Domain Profile
  HDAC Class-I
    class-1.txt  18 qkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaa 113
                    ++hp    r++ + +++    + + l+  + + a+a+el +fhs eyie l + +++ a++l +          + +  g +    l +G++l+a+
  Sb09g021720.1  52 DQHPENADRVRNMVSILRRGPIAHFLSWHSGRPAHASELRSFHSSEYIEELVQANATGAKKLCE---------GTFLNPGSWGAVLLAAGTTLSAV 138
                    689999999999999999999999999999*********************9999988888773.........334455667777799******** PP
    class-1.txt 114 kkLnkkeadiainw.aGGlhhakkseasGfcyvnDivlail.ellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygeef...fPgtGdl 204
                    k++ +++ ++a        hha+  +a G+c++n+  la++  l     +v  +did+h+G+g  e fy td v+t+s+h  + ++    P +G++
  Sb09g021720.1 139 KHILDGHGNLAYALvRPPGHHAQPGHADGYCFLNNAGLAVQlALDSGRAKVAVVDIDVHYGNGTAEGFYRTDNVLTMSLHMRHGSWgpsHPQSGSV 234
                    *******999987624567********************9715556899*******************************8666662336789*** PP
    class-1.txt 205 sdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.....nlpllvlGGGG 295
                    +++g++kg  y +n+Pl +g  D  ye  +++++ + i+ f+P+ +vl +G Ds a D+ g   l+++g+ ++ ++++s      n ++lv+  GG
  Sb09g021720.1 235 DEIGEGKGLGYNLNIPLPNGSGDAGYEYAMNELVVPAIDKFQPQLLVLVIGQDSSAFDPNGRQCLTMEGYRKIGQIMRSLanrhsNGQILVVQEGG 330
                    *****************************************************************************997643345679******* PP
    class-1.txt 296 YtlrnvaRc 304
                    Y ++  a c
  Sb09g021720.1 331 YHITYSAYC 339
                    **9988877 PP
Protein Sequence
(Fasta)		MASESSPPPA EAPPPVPGNK LAVFWHEGML AHDAGRGVFD SGRDPGFLDV LDQHPENADR 60
VRNMVSILRR GPIAHFLSWH SGRPAHASEL RSFHSSEYIE ELVQANATGA KKLCEGTFLN 120
PGSWGAVLLA AGTTLSAVKH ILDGHGNLAY ALVRPPGHHA QPGHADGYCF LNNAGLAVQL 180
ALDSGRAKVA VVDIDVHYGN GTAEGFYRTD NVLTMSLHMR HGSWGPSHPQ SGSVDEIGEG 240
KGLGYNLNIP LPNGSGDAGY EYAMNELVVP AIDKFQPQLL VLVIGQDSSA FDPNGRQCLT 300
MEGYRKIGQI MRSLANRHSN GQILVVQEGG YHITYSAYCL HATLEGVLDL EAPLLDDPIA 360
YYPEDEEYTM KVVDMVRSCW KESVPFLKDI
Nucleotide Sequence
(Fasta)		AGCGCCGTCA CTGGAAGCGA AATCCCCCGC GCCGAGCCGC CGATGGCGTC CGAATCCTCA 60
CCGCCGCCGG CGGAGGCGCC ACCGCCGGTT CCGGGAAACA AGCTGGCGGT ATTCTGGCAC 120
GAGGGCATGC TGGCCCACGA CGCCGGCCGC GGCGTGTTCG ACTCGGGCCG CGATCCGGGA 180
TTCCTGGATG TGCTCGACCA GCACCCGGAG AACGCCGACC GCGTCCGCAA CATGGTCTCC 240
ATCCTCCGCC GCGGGCCCAT CGCGCACTTC CTCTCCTGGC ACTCGGGCCG CCCCGCCCAC 300
GCCTCCGAGC TTCGCTCCTT CCACTCCTCA GAATACATAG AGGAGCTTGT GCAGGCGAAC 360
GCCACCGGAG CCAAGAAGCT CTGCGAGGGC ACATTCTTGA ACCCGGGCTC CTGGGGCGCG 420
GTGCTTCTAG CGGCCGGAAC CACGCTCTCT GCTGTGAAGC ACATACTAGA TGGGCACGGG 480
AACCTGGCCT ACGCGTTGGT TCGGCCCCCT GGCCACCACG CGCAGCCCGG CCATGCAGAT 540
GGTTACTGCT TTCTGAACAA TGCCGGACTT GCTGTGCAGC TGGCTCTGGA TTCCGGGCGT 600
GCAAAGGTTG CTGTTGTGGA TATTGATGTA CACTACGGGA ATGGTACTGC AGAGGGCTTC 660
TATCGCACAG ACAATGTGTT GACAATGTCT CTTCACATGA GGCATGGTTC TTGGGGGCCA 720
TCGCATCCGC AAAGTGGCTC CGTCGATGAG ATTGGTGAAG GCAAGGGGCT TGGGTACAAT 780
CTCAATATAC CTTTGCCTAA TGGAAGTGGA GATGCTGGGT ATGAATATGC GATGAACGAG 840
TTGGTTGTTC CAGCGATTGA TAAGTTTCAG CCTCAGCTTT TAGTTTTGGT GATTGGCCAA 900
GATTCTAGTG CGTTTGATCC CAATGGAAGA CAGTGCTTGA CCATGGAAGG CTACAGGAAA 960
ATTGGACAAA TAATGAGGAG CCTGGCTAAT CGACATAGCA ACGGGCAAAT ATTGGTTGTC 1020
CAGGAAGGGG GTTACCACAT CACTTATTCA GCATACTGTC TGCATGCTAC ACTGGAAGGA 1080
GTTTTGGATC TGGAAGCCCC GCTCCTTGAT GACCCGATCG CTTACTACCC CGAGGATGAG 1140
GAGTACACTA TGAAAGTTGT CGACATGGTA AGGAGTTGCT GGAAGGAATC GGTTCCTTTC 1200
CTGAAGGACA TTTAGAGGAA ATCATGTTTT AGACGCCCCG ATTGAATTAG GAAGATCACA 1260
CGTTGGAGTA CGTTTTTAGG CCTTGTATTT AAGATTCCCT GGTCACAAAC AATATTGCAC 1320
AGGATAGGTT AAGAACATTG TTTGCTGCTG CTGTTGAGTT TCTGAAAATC AGGATCTCGT 1380
CAGCCTATTT TGGATAAACA GCTGATCTTT TCC 1414
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Lep-0054 LPERR05G14310.1 Leersia perrieri 90 0.0 709
WERAM-Sei-0083 Si022311m Setaria italica 94 0.0 707
WERAM-Ors-0049 OS05T0440250-01 Oryza sativa 88 0.0 704
WERAM-Ori-0058 BGIOSGA017971-PA Oryza indica 88 0.0 704
WERAM-Orgl-0054 OGLUM05G19120.1 Oryza glumaepatula 88 0.0 704
WERAM-Brd-0045 BRADI2G24020.1 Brachypodium distachyon 89 0.0 703
WERAM-Org-0053 ORGLA05G0156700.1 Oryza glaberrima 88 0.0 703
WERAM-Tra-0017 Traes_1BL_B77909838.1 Triticum aestivum 90 0.0 702
WERAM-Orr-0055 ORUFI05G19220.1 Oryza rufipogon 88 0.0 701
WERAM-Aet-0025 EMT04688 Aegilops tauschii 89 0.0 697
WERAM-Orl-0065 KN539375.1_FGP010 Oryza longistaminata 88 0.0 681
WERAM-Orni-0050 ONIVA05G18980.1 Oryza nivara 88 0.0 675
WERAM-Orbr-0062 OB05G25730.1 Oryza brachyantha 87 0.0 671
WERAM-Tru-0024 TRIUR3_12332-P1 Triticum urartu 89 0.0 665
WERAM-Orm-0052 OMERI05G15690.1 Oryza meridionalis 88 0.0 651
WERAM-Mua-0091 GSMUA_Achr6P19520_001 Musa acuminata 78 1e-178 623
WERAM-Prp-0067 EMJ06546 Prunus persica 74 8e-169 590
WERAM-Met-0052 AES67133 Medicago truncatula 73 7e-167 583
WERAM-Amt-0035 ERN16099 Amborella trichopoda 72 2e-163 572
WERAM-Sol-0084 Solyc06g074080.2.1 Solanum lycopersicum 73 3e-163 572
WERAM-Pot-0100 POPTR_0009s02560.1 Populus trichocarpa 75 5e-163 571
WERAM-Glm-0150 GLYMA12G31380.1 Glycine max 71 7e-161 564
WERAM-Orp-0051 OPUNC05G15950.1 Oryza punctata 77 1e-159 560
WERAM-Sot-0016 PGSC0003DMT400015085 Solanum tuberosum 73 7e-159 557
WERAM-Orb-0053 OBART05G18100.1 Oryza barthii 77 2e-158 556
WERAM-Brr-0156 Bra031628.1-P Brassica rapa 70 3e-158 555
WERAM-Bro-0161 Bo8g112460.1 Brassica oleracea 70 3e-157 552
WERAM-Art-0007 AT1G08460.1 Arabidopsis thaliana 69 6e-156 547
WERAM-Viv-0042 VIT_06s0080g00210.t01 Vitis vinifera 76 4e-154 541
WERAM-Arl-0048 fgenesh2_kg.1__ 860__ AT1G08460.1 Arabidopsis lyrata 68 9e-153 536
WERAM-Zem-0043 GRMZM2G056539_P01 Zea mays 95 8e-151 530
WERAM-Php-0020 PP1S142_41V6.1 Physcomitrella patens 65 1e-139 493
WERAM-Sem-0051 EFJ08230 Selaginella moellendorffii 61 8e-127 451
WERAM-Thc-0113 EOY33305 Theobroma cacao 68 1e-124 443
WERAM-Hov-0039 MLOC_38610.1 Hordeum vulgare 89 2e-91 333
WERAM-Cag-0018 CAG60803 Candida glabrata 32 2e-39 160
WERAM-Drm-0028 FBpp0290988 Drosophila melanogaster 31 3e-39 159
WERAM-Asg-0010 AAS51704 Ashbya gossypii 32 4e-38 156
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 31 5e-38 155
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 35 5e-38 155
WERAM-Xet-0155 ENSXETP00000050501.3 Xenopus tropicalis 30 6e-38 155
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 32 1e-37 154
WERAM-Kop-0012 CAY68916 Komagataella pastoris 32 2e-37 154
WERAM-Dar-0023 ENSDARP00000124246.1 Danio rerio 34 2e-37 153
WERAM-Ran-0209 ENSRNOP00000009295.5 Rattus norvegicus 34 4e-37 152
WERAM-Anc-0082 ENSACAP00000007918.3 Anolis carolinensis 35 6e-37 152
WERAM-Osl-0036 ABP01312 Ostreococcus lucimarinus 34 7e-37 152
WERAM-Mum-0115 ENSMUSP00000033501.8 Mus musculus 33 1e-36 151
WERAM-Otg-0149 ENSOGAP00000012689.2 Otolemur garnettii 32 2e-36 150
WERAM-Coi-0028 EAS30926 Coccidioides immitis 32 3e-36 150
WERAM-Orc-0102 ENSOCUP00000008741.3 Oryctolagus cuniculus 33 3e-36 149
WERAM-Asm-0181 ENSAMXP00000017644.1 Astyanax mexicanus 34 5e-36 149
WERAM-Prc-0036 ENSPCAP00000003334.1 Procavia capensis 31 5e-36 149
WERAM-Aim-0139 ENSAMEP00000013236.1 Ailuropoda melanoleuca 34 6e-36 149
WERAM-Mod-0081 ENSMODP00000012731.2 Monodelphis domestica 30 7e-36 148
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 31 8e-36 148
WERAM-Orn-0011 ENSONIP00000001061.1 Oreochromis niloticus 32 1e-35 147
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 33 2e-35 147
WERAM-Caf-0161 ENSCAFP00000022990.3 Canis familiaris 31 2e-35 147
WERAM-Ict-0125 ENSSTOP00000012693.2 Ictidomys tridecemlineatus 33 2e-35 147
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 31 2e-35 147
WERAM-Usm-0012 UM02102P0 Ustilago maydis 37 2e-35 147
WERAM-Ten-0019 ENSTNIP00000004593.1 Tetraodon nigroviridis 33 2e-35 147
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 31 2e-35 147
WERAM-Hos-0058 ENSP00000216271.5 Homo sapiens 32 3e-35 146
WERAM-Nol-0005 ENSNLEP00000000692.2 Nomascus leucogenys 32 4e-35 146
WERAM-Eqc-0001 ENSECAP00000001121.1 Equus caballus 33 5e-35 145
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 32 5e-35 145
WERAM-Mup-0158 ENSMPUP00000013557.1 Mustela putorius furo 30 5e-35 145
WERAM-Pat-0122 ENSPTRP00000025053.4 Pan troglodytes 32 6e-35 145
WERAM-Gog-0159 ENSGGOP00000014095.2 Gorilla gorilla 32 6e-35 145
WERAM-Myl-0104 ENSMLUP00000008295.2 Myotis lucifugus 32 7e-35 145
WERAM-Loa-0047 ENSLAFP00000003196.3 Loxodonta africana 32 1e-34 145
WERAM-Sus-0177 ENSSSCP00000022636.1 Sus scrofa 31 1e-34 144
WERAM-Cae-0060 F41H10.6b Caenorhabditis elegans 31 1e-34 144
WERAM-Fec-0031 ENSFCAP00000002366.3 Felis catus 33 1e-34 144
WERAM-Cap-0109 ENSCPOP00000008049.2 Cavia porcellus 31 1e-34 144
WERAM-Bot-0122 ENSBTAP00000017618.5 Bos taurus 29 2e-34 143
WERAM-Pug-0031 EFP89333 Puccinia graminis 29 3e-34 143
WERAM-Tar-0042 ENSTRUP00000010127.1 Takifugu rubripes 33 3e-34 143
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 33 4e-34 142
WERAM-Caa-0034 KGT64501 Candida albicans 29 4e-34 142
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 33 4e-34 142
WERAM-Chs-0051 ENSCSAP00000001305.1 Chlorocebus sabaeus 31 6e-34 142
WERAM-Poa-0196 ENSPPYP00000022747.2 Pongo abelii 32 6e-34 142
WERAM-Mam-0153 ENSMMUP00000021637.2 Macaca mulatta 32 8e-34 142
WERAM-Paa-0049 ENSPANP00000006915.1 Papio anubis 32 9e-34 141
WERAM-Dan-0022 ENSDNOP00000002136.3 Dasypus novemcinctus 34 9e-34 141
WERAM-Xim-0160 ENSXMAP00000013063.1 Xiphophorus maculatus 33 1e-33 141
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 29 1e-33 141
WERAM-Anp-0022 ENSAPLP00000003127.1 Anas platyrhynchos 31 2e-33 140
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 34 2e-33 140
WERAM-Ova-0124 ENSOARP00000012678.1 Ovis aries 30 2e-33 140
WERAM-Fia-0117 ENSFALP00000010126.1 Ficedula albicollis 31 2e-33 140
WERAM-Chr-0012 EDP07560 Chlamydomonas reinhardtii 32 2e-33 140
WERAM-Caj-0022 ENSCJAP00000004409.2 Callithrix jacchus 33 2e-33 140
WERAM-Tut-0056 ENSTTRP00000004443.1 Tursiops truncatus 30 2e-33 140
WERAM-Lab-0047 EDQ99497 Laccaria bicolor 27 3e-33 140
WERAM-Mae-0111 ENSMEUP00000010640.1 Macropus eugenii 31 3e-33 140
WERAM-Phn-0010 SNOT_01279 Phaeosphaeria nodorum 37 3e-33 139
WERAM-Meg-0084 ENSMGAP00000008226.2 Meleagris gallopavo 30 6e-33 139
WERAM-Gam-0051 ENSGMOP00000005244.1 Gadus morhua 33 6e-33 139
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 38 9e-33 138
Created Date 25-Jun-2016