| Tag |
Content |
| WERAM ID |
WERAM-Fia-0044 |
| Ensembl Protein ID |
ENSFALP00000003005.1 |
| Gene Name |
HDAC3 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
6.20e-163 |
541.4 |
47 |
417 |
|
| Organism |
Ficedula albicollis |
| Domain Profile |
HDAC Class-I
class-1.txt 17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqli 105
g++hpmkp+rl+lth+Lvl+ygl+kk+ ++kp +as++++++fhse+yi+fl++v+p+n++ ++k+l+ fnvg+dcPvf glfe+c+ +
ENSFALP00000003005.1 47 GAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRY 135
689************************************************************************************** PP
class-1.txt 106 tGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkyg 194
tGasl++a++Ln+k +diainwaGGlhhakk easGfcyvnDiv++ilellk+h+rvlyidid+hhGDgv+eafy tdrvmtvsfhkyg
ENSFALP00000003005.1 136 TGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYG 224
***************************************************************************************** PP
class-1.txt 195 eeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvks 283
++ffPgtGd+++vgae+g+yy++nvPl+dgidD+sy+++f++vi++v++ ++P+++vlqcGaDsl +Drlg+fnlsi+gh+ecv++vks
ENSFALP00000003005.1 225 NYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKS 313
***************************************************************************************** PP
class-1.txt 284 fnlpllvlGGGGYtlrnvaRcwtyetavvl 313
fn+pllvlGGGGYt+rnvaRcwtyet++++
ENSFALP00000003005.1 314 FNIPLLVLGGGGYTVRNVARCWTYETSLLV 343
***************************987 PP
class-1.txt 228 esyekifksviskv.ieafePeavvlqcGaDslagDr 263
+++ +i +++ +++ + + P++ + ++ +D l+ Dr
ENSFALP00000003005.1 381 QYLDQIRQTIFENLkMLNHAPSVQIHDVPSDLLSYDR 417
5678888889888735679999999999999999998 PP
|
Protein Sequence
(Fasta) | MITPLTVITP LPPPPPPPPP PPPPPPPPPP PPPPPPPPPR PRPSVPGAGH PMKPHRLALT 60
HSLVLHYGLY KKMIVFKPYQ ASQHDMCRFH SEDYIDFLQR VSPNNMQGFT KSLNAFNVGD 120
DCPVFPGLFE FCSRYTGASL QGATQLNNKI CDIAINWAGG LHHAKKFEAS GFCYVNDIVI 180
GILELLKYHP RVLYIDIDIH HGDGVQEAFY LTDRVMTVSF HKYGNYFFPG TGDMYEVGAE 240
SGRYYCLNVP LRDGIDDQSY KHLFQPVINQ VVDYYQPTCI VLQCGADSLG CDRLGCFNLS 300
IRGHGECVEY VKSFNIPLLV LGGGGYTVRN VARCWTYETS LLVDEPISDE LPYSEYFEYF 360
APDFTLHPDV STRIENQNSR QYLDQIRQTI FENLKMLNHA PSVQIHDVPS DLLSYDRTDE 420
PDPEERGSEE NYNRPEAPNE FYDGDHDNDK ESDVEI 456Protein Fasta Sequence
>ENSFALP00000003005.1|Class-I|Ficedula albicollis
MITPLTVITPLPPPPPPPPPPPPPPPPPPPPPPPPPPPPRPRPSVPGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDEPISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSDLLSYDRTDEPDPEERGSEENYNRPEAPNEFYDGDHDNDKESDVEI |
Nucleotide Sequence
(Fasta) | GCAGTAACTG GGATCTGCTG GGTGGAACTG GGGGCTGTTG GGTGGAACTG GGAGTAGGTG 60
AGGGGCAGTG AGGGATAACC GGGGGAGCTG AGGATGACTA GACAGATGAC ATGGGGTTAT 120
GGGAGAGAGT CCAGCCGGCA ACTGGGAGTT AGTGGGCGCA GATGGGGGCA GGTAGAGGGC 180
AGGCAGGTGA GACTGTGGCA CAGCGGGATG TGGCTGCGGC TAACTCCAGG CAGCTGGGGG 240
TAGCTGTGAG GCGCTAGAAG CGACTGGGAC CAGCCTGGAG GCACTGGGGA GCGCGGACAG 300
GCAGCTGGGG GTAGCTGTGA GGCGCTGGAG GCGACTGGGA CCAGCCTGGA GGAACTGGGG 360
AGCGCGGGGG GGAGACACAG GGAAATGGCC ACGCCCCCTG ACAGAGCCAC GCCCCTCACA 420
AGCGCCACGC CCCCTGACCA AAAGCCACGC CTCTCACAGT GGCCTTGCCC CCCAAAATGG 480
CCGTGATAAC GCCCCTCACA CTGATAACGC CCCTCACAGT GATAACGCCC CTCACACTGA 540
TAACGCCCCT CACACTGATA ACGCCCCTCA CACTGATAAC GCCCCTCACA GTGATAACGC 600
CCCTCACAAT GATAACGCCC CTCACAATGA TAACGCTCCT CACAATGATA ACGCTCCTCA 660
CAATGATAAC GCCCCTAACA GTGATAACGC CCCTCCCCCC CCCCCCCCCC CCCCCCCCCC 720
CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC 780
GCCCGCGCCC TTCCGTTCCA GGCGCGGGGC ACCCCATGAA GCCGCATCGC CTGGCGCTCA 840
CGCACAGCCT GGTGCTGCAC TACGGCCTCT ACAAGAAAAT GATCGTGTTC AAGCCCTACC 900
AGGCCTCCCA GCACGACATG TGCCGCTTCC ACTCCGAGGA TTACATCGAT TTCCTGCAGA 960
GGGTGAGCCC CAACAACATG CAGGGCTTCA CCAAGAGCCT CAATGCCTTC AACGTGGGGG 1020
ATGACTGCCC AGTGTTTCCA GGCCTCTTTG AATTCTGCTC TCGTTACACC GGGGCCTCCC 1080
TGCAGGGAGC AACACAGCTG AACAACAAGA TCTGTGACAT TGCCATAAAC TGGGCAGGGG 1140
GCCTCCATCA TGCCAAAAAG TTTGAGGCTT CGGGTTTTTG TTACGTCAAT GACATCGTGA 1200
TCGGCATCCT GGAGCTGCTC AAGTACCACC CCCGTGTGCT GTACATCGAC ATCGATATCC 1260
ACCACGGCGA CGGGGTGCAG GAGGCTTTCT ACCTGACAGA TCGTGTCATG ACAGTGTCAT 1320
TTCACAAATA CGGCAACTAT TTCTTCCCTG GCACAGGTGA CATGTATGAG GTTGGTGCAG 1380
AGAGTGGTCG CTACTACTGT CTGAACGTGC CCCTCCGAGA TGGCATCGAT GACCAAAGTT 1440
ATAAGCACCT CTTCCAGCCA GTCATTAACC AGGTGGTAGA TTACTATCAG CCCACCTGCA 1500
TAGTCCTGCA GTGTGGTGCT GATTCTCTGG GCTGTGACCG GTTGGGATGT TTTAACCTCA 1560
GTATAAGAGG CCATGGGGAG TGTGTGGAGT ACGTGAAGAG CTTCAACATC CCCCTGCTGG 1620
TGCTGGGAGG AGGAGGTTAC ACGGTCAGGA ACGTGGCACG CTGCTGGACT TATGAAACAT 1680
CCTTGCTTGT AGATGAACCA ATCAGTGACG AGCTCCCATA CAGTGAGTAT TTTGAATACT 1740
TCGCTCCAGA CTTCACCCTT CACCCCGATG TCAGCACCAG GATTGAGAAT CAGAACTCCA 1800
GGCAGTACCT GGATCAGATC AGGCAGACCA TCTTTGAGAA CCTGAAGATG CTGAACCACG 1860
CTCCCAGCGT GCAGATCCAC GACGTCCCCT CCGACCTGCT CAGCTACGAC CGCACGGACG 1920
AGCCCGACCC CGAGGAGAGG GGCTCTGAGG AGAACTACAA CAGGCCTGAA GCTCCCAACG 1980
AGTTCTACGA CGGTGACCAC GACAATGACA AAGAGAGCGA CGTGGAGATC TGA
2034Nucleotide Fasta Sequence
>ENSFALP00000003005.1|Class-I|Ficedula albicollis
GCAGTAACTGGGATCTGCTGGGTGGAACTGGGGGCTGTTGGGTGGAACTGGGAGTAGGTGAGGGGCAGTGAGGGATAACCGGGGGAGCTGAGGATGACTAGACAGATGACATGGGGTTATGGGAGAGAGTCCAGCCGGCAACTGGGAGTTAGTGGGCGCAGATGGGGGCAGGTAGAGGGCAGGCAGGTGAGACTGTGGCACAGCGGGATGTGGCTGCGGCTAACTCCAGGCAGCTGGGGGTAGCTGTGAGGCGCTAGAAGCGACTGGGACCAGCCTGGAGGCACTGGGGAGCGCGGACAGGCAGCTGGGGGTAGCTGTGAGGCGCTGGAGGCGACTGGGACCAGCCTGGAGGAACTGGGGAGCGCGGGGGGGAGACACAGGGAAATGGCCACGCCCCCTGACAGAGCCACGCCCCTCACAAGCGCCACGCCCCCTGACCAAAAGCCACGCCTCTCACAGTGGCCTTGCCCCCCAAAATGGCCGTGATAACGCCCCTCACACTGATAACGCCCCTCACAGTGATAACGCCCCTCACACTGATAACGCCCCTCACACTGATAACGCCCCTCACACTGATAACGCCCCTCACAGTGATAACGCCCCTCACAATGATAACGCCCCTCACAATGATAACGCTCCTCACAATGATAACGCTCCTCACAATGATAACGCCCCTAACAGTGATAACGCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCGCGCCCTTCCGTTCCAGGCGCGGGGCACCCCATGAAGCCGCATCGCCTGGCGCTCACGCACAGCCTGGTGCTGCACTACGGCCTCTACAAGAAAATGATCGTGTTCAAGCCCTACCAGGCCTCCCAGCACGACATGTGCCGCTTCCACTCCGAGGATTACATCGATTTCCTGCAGAGGGTGAGCCCCAACAACATGCAGGGCTTCACCAAGAGCCTCAATGCCTTCAACGTGGGGGATGACTGCCCAGTGTTTCCAGGCCTCTTTGAATTCTGCTCTCGTTACACCGGGGCCTCCCTGCAGGGAGCAACACAGCTGAACAACAAGATCTGTGACATTGCCATAAACTGGGCAGGGGGCCTCCATCATGCCAAAAAGTTTGAGGCTTCGGGTTTTTGTTACGTCAATGACATCGTGATCGGCATCCTGGAGCTGCTCAAGTACCACCCCCGTGTGCTGTACATCGACATCGATATCCACCACGGCGACGGGGTGCAGGAGGCTTTCTACCTGACAGATCGTGTCATGACAGTGTCATTTCACAAATACGGCAACTATTTCTTCCCTGGCACAGGTGACATGTATGAGGTTGGTGCAGAGAGTGGTCGCTACTACTGTCTGAACGTGCCCCTCCGAGATGGCATCGATGACCAAAGTTATAAGCACCTCTTCCAGCCAGTCATTAACCAGGTGGTAGATTACTATCAGCCCACCTGCATAGTCCTGCAGTGTGGTGCTGATTCTCTGGGCTGTGACCGGTTGGGATGTTTTAACCTCAGTATAAGAGGCCATGGGGAGTGTGTGGAGTACGTGAAGAGCTTCAACATCCCCCTGCTGGTGCTGGGAGGAGGAGGTTACACGGTCAGGAACGTGGCACGCTGCTGGACTTATGAAACATCCTTGCTTGTAGATGAACCAATCAGTGACGAGCTCCCATACAGTGAGTATTTTGAATACTTCGCTCCAGACTTCACCCTTCACCCCGATGTCAGCACCAGGATTGAGAATCAGAACTCCAGGCAGTACCTGGATCAGATCAGGCAGACCATCTTTGAGAACCTGAAGATGCTGAACCACGCTCCCAGCGTGCAGATCCACGACGTCCCCTCCGACCTGCTCAGCTACGACCGCACGGACGAGCCCGACCCCGAGGAGAGGGGCTCTGAGGAGAACTACAACAGGCCTGAAGCTCCCAACGAGTTCTACGACGGTGACCACGACAATGACAAAGAGAGCGACGTGGAGATCTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
