| Tag |
Content |
| WERAM ID |
WERAM-Prc-0116 |
| Ensembl Protein ID |
ENSPCAP00000010084.1 |
| Gene Name |
HDAC3 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
5.50e-137 |
456.2 |
4 |
390 |
|
| Organism |
Procavia capensis |
| Domain Profile |
HDAC Class-I
class-1.txt 2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge 90
+vay+yd+dvg++hyg++hpmkp+rl+lth+Lvl+ygl+kk+ ++kp +as++++++fhse+yi+fl++v+p+n++ ++k+l+ fnvg+
ENSPCAP00000010084.1 4 TVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGD 92
79*************************************************************************************** PP
class-1.txt 91 dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeaf 179
dcPvf glfe+c+ +tGasl++a++Ln+k +diainwaGGlhhakk easGfcyvnDiv++ilellk+h+rvlyidid+hhGDgv+eaf
ENSPCAP00000010084.1 93 DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAF 181
***************************************************************************************** PP
class-1.txt 180 yttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDes 229
y tdrvmtvsfhkyg++ffPgtGd+++vgae+g+yy++nvPl+dgidD+
ENSPCAP00000010084.1 182 YLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQX 231
************************************************96 PP
class-1.txt 275 aecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
ecv++vksfn+pllvlGGGGYt+rnvaRcwtyet++++
ENSPCAP00000010084.1 277 XECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLV 315
68**********************************986 PP
class-1.txt 228 esyekifksviskv.ieafePeavvlqcGaDslagDrl 264
+++ +i +++ +++ + + P++ + ++ +D l+ Dr
ENSPCAP00000010084.1 353 QYLDQIRQTIFENLkMLNHAPSVQIHDVPSDLLTYDRT 390
56778888898887356799999999999999999996 PP
|
Protein Sequence
(Fasta) | MAKTVAYFYD PDVGNFHYGA GHPMKPHRLA LTHSLVLHYG LYKKMIVFKP YQASQHDMCR 60
FHSEDYIDFL QRVSPTNMQG FTKSLNAFNV GDDCPVFPGL FEFCSRYTGA SLQGATQLNN 120
KICDIAINWA GGLHHAKKFE ASGFCYVNDI VIGILELLKY HPRVLYIDID IHHGDGVQEA 180
FYLTDRVMTV SFHKYGNYFF PGTGDMYEVG AESGRYYCLN VPLRDGIDDQ XXXXXXXXXX 240
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXECV EYVKSFNIPL LVLGGGGYTV 300
RNVARCWTYE TSLLVEEAIS EELPYSEYFE YFAPDFTLHP DVSTRIENQN SRQYLDQIRQ 360
TIFENLKMLN HAPSVQIHDV PSDLLTYDRT DEADAEERGP EENYSRPEAP NEFYDGDHDN 420
DKESDVEI 428Protein Fasta Sequence
>ENSPCAP00000010084.1|Class-I|Procavia capensis
MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSDLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDNDKESDVEI |
Nucleotide Sequence
(Fasta) | ATGGCCAAGA CCGTGGCCTA TTTCTATGAC CCGGACGTGG GCAACTTCCA CTATGGGGCT 60
GGACACCCTA TGAAGCCCCA TCGCCTGGCG TTGACCCATA GCCTGGTTCT GCACTACGGT 120
CTCTATAAGA AGATGATCGT CTTCAAGCCA TACCAGGCTT CCCAGCATGA CATGTGCCGC 180
TTCCACTCTG AGGACTACAT TGACTTCCTG CAGAGAGTCA GCCCCACCAA TATGCAAGGC 240
TTCACCAAGA GCCTTAATGC CTTCAATGTG GGTGATGACT GCCCAGTGTT TCCCGGGCTG 300
TTTGAATTCT GCTCCCGTTA CACAGGTGCC TCTCTACAAG GAGCAACCCA GCTGAACAAC 360
AAGATCTGTG ATATTGCCAT TAACTGGGCT GGTGGTCTGC ATCATGCCAA GAAGTTTGAG 420
GCTTCGGGCT TCTGCTATGT CAACGACATT GTAATTGGGA TCCTGGAACT GCTCAAGTAC 480
CACCCTCGGG TTCTCTACAT TGATATTGAC ATCCACCATG GTGATGGGGT TCAGGAAGCC 540
TTCTACCTCA CTGACCGGGT CATGACAGTG TCCTTCCACA AATATGGAAA TTACTTCTTC 600
CCTGGTACAG GTGACATGTA TGAAGTCGGA GCGGAGAGCG GTCGCTACTA TTGTCTCAAT 660
GTGCCCCTGC GGGATGGCAT TGATGACCAG ANNNNNNNNN NNNNNNNNNN NNNNNNNNNN 720
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 780
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN GGAATGTGTC 840
GAATATGTCA AGAGCTTCAA TATCCCTCTA CTGGTGCTAG GTGGTGGTGG CTACACTGTG 900
CGAAATGTTG CACGCTGCTG GACTTACGAG ACATCACTGC TGGTAGAAGA AGCAATTAGC 960
GAGGAACTTC CCTATAGTGA ATACTTCGAA TACTTTGCCC CGGACTTCAC ACTCCATCCG 1020
GATGTCAGCA CTCGCATTGA AAATCAGAAC TCACGCCAGT ATCTGGACCA GATCCGTCAG 1080
ACAATCTTTG AGAACCTGAA GATGCTTAAC CATGCACCTA GTGTCCAGAT TCATGATGTG 1140
CCCTCAGACC TCTTGACCTA TGACAGGACT GATGAGGCTG ATGCAGAGGA GAGGGGTCCT 1200
GAGGAGAACT ACAGCAGGCC AGAGGCACCC AATGAGTTCT ACGATGGAGA CCATGACAAT 1260
GACAAGGAAA GTGACGTGGA AATTTAA
1288Nucleotide Fasta Sequence
>ENSPCAP00000010084.1|Class-I|Procavia capensis
ATGGCCAAGACCGTGGCCTATTTCTATGACCCGGACGTGGGCAACTTCCACTATGGGGCTGGACACCCTATGAAGCCCCATCGCCTGGCGTTGACCCATAGCCTGGTTCTGCACTACGGTCTCTATAAGAAGATGATCGTCTTCAAGCCATACCAGGCTTCCCAGCATGACATGTGCCGCTTCCACTCTGAGGACTACATTGACTTCCTGCAGAGAGTCAGCCCCACCAATATGCAAGGCTTCACCAAGAGCCTTAATGCCTTCAATGTGGGTGATGACTGCCCAGTGTTTCCCGGGCTGTTTGAATTCTGCTCCCGTTACACAGGTGCCTCTCTACAAGGAGCAACCCAGCTGAACAACAAGATCTGTGATATTGCCATTAACTGGGCTGGTGGTCTGCATCATGCCAAGAAGTTTGAGGCTTCGGGCTTCTGCTATGTCAACGACATTGTAATTGGGATCCTGGAACTGCTCAAGTACCACCCTCGGGTTCTCTACATTGATATTGACATCCACCATGGTGATGGGGTTCAGGAAGCCTTCTACCTCACTGACCGGGTCATGACAGTGTCCTTCCACAAATATGGAAATTACTTCTTCCCTGGTACAGGTGACATGTATGAAGTCGGAGCGGAGAGCGGTCGCTACTATTGTCTCAATGTGCCCCTGCGGGATGGCATTGATGACCAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAATGTGTCGAATATGTCAAGAGCTTCAATATCCCTCTACTGGTGCTAGGTGGTGGTGGCTACACTGTGCGAAATGTTGCACGCTGCTGGACTTACGAGACATCACTGCTGGTAGAAGAAGCAATTAGCGAGGAACTTCCCTATAGTGAATACTTCGAATACTTTGCCCCGGACTTCACACTCCATCCGGATGTCAGCACTCGCATTGAAAATCAGAACTCACGCCAGTATCTGGACCAGATCCGTCAGACAATCTTTGAGAACCTGAAGATGCTTAACCATGCACCTAGTGTCCAGATTCATGATGTGCCCTCAGACCTCTTGACCTATGACAGGACTGATGAGGCTGATGCAGAGGAGAGGGGTCCTGAGGAGAACTACAGCAGGCCAGAGGCACCCAATGAGTTCTACGATGGAGACCATGACAATGACAAGGAAAGTGACGTGGAAATTTAA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
