WERAM Information


Tag Content
WERAM ID WERAM-Gam-0015
Ensembl Protein ID ENSGMOP00000001496.1
Gene Name hdac3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGMOG00000001416.1 ENSGMOT00000001550.1 ENSGMOP00000001496.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.10e-166 554.2 4 392
Organism Gadus morhua
Domain Profile
  HDAC Class-I

           class-1.txt   2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge 90 
+ ay+yd+dvg++hyg++hpmkp+rlslth+Lvl+ygl+kk+ ++kp kas++++++fhse+yi+fl+kv+p+n++ ++k+l+ fnvg+
ENSGMOP00000001496.1 4 RTAYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFHSEDYIDFLQKVSPNNMQGFTKSLNTFNVGD 92
679************************************************************************************** PP
class-1.txt 91 dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeaf 179
dcPvf glfe+c+ +tGasl++a++Ln+k +diainwaGGlhhakk easGfcyvnDiv++ilellk+h+rvlyidid+hhGDgv+eaf
ENSGMOP00000001496.1 93 DCPVFPGLFEFCSRYTGASLQGATQLNHKICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAF 181
***************************************************************************************** PP
class-1.txt 180 yttdrvmtvsfhkygeeffPgt..GdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlge 266
y tdrvmtvsfhkyg++ffPgt Gd+++vgae+g+yy++nvPl+dgidD+sy+++f++vi++v+++++P+++vlqcGaDsl +Drlg+
ENSGMOP00000001496.1 182 YLTDRVMTVSFHKYGNYFFPGTvaGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQVVDFYQPTCIVLQCGADSLGCDRLGC 270
*********************888***************************************************************** PP
class-1.txt 267 fnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
fnlsi+gh+ecv+fvksf +pllvlGGGGYt+rnvaRcwtyet++++
ENSGMOP00000001496.1 271 FNLSIRGHGECVEFVKSFGIPLLVLGGGGYTVRNVARCWTYETSLLV 317
********************************************987 PP
class-1.txt 226 dDesyekifksviskv.ieafePeavvlqcGaDslagDr 263
+ +++e+i ++v +++ + + P++ + ++ D l+ Dr
ENSGMOP00000001496.1 354 RQQYLEQIRQTVFENLkMLNHAPSVQIHDVPNDLLSYDR 392
567889999999999845679999999999999999998 PP

Protein Sequence
(Fasta)
MSNRTAYFYD PDVGNFHYGA GHPMKPHRLS LTHSLVLHYG LYKKMMVFKP YKASQHDMCR 60
FHSEDYIDFL QKVSPNNMQG FTKSLNTFNV GDDCPVFPGL FEFCSRYTGA SLQGATQLNH 120
KICDIAINWA GGLHHAKKFE ASGFCYVNDI VISILELLKY HPRVLYIDID IHHGDGVQEA 180
FYLTDRVMTV SFHKYGNYFF PGTVAGDMYE VGAESGRYYC LNVPLRDGID DQSYRQLFQP 240
VIKQVVDFYQ PTCIVLQCGA DSLGCDRLGC FNLSIRGHGE CVEFVKSFGI PLLVLGGGGY 300
TVRNVARCWT YETSLLVDEP ISDELPYSEY FEYFAPDFTL HPDVSTRIEN QNTRQQYLEQ 360
IRQTVFENLK MLNHAPSVQI HDVPNDLLSY DRTDEPDPDE RGAEDGYSRP EAAGEFYDGD 420
HDNDKESDVE I 431
Nucleotide Sequence
(Fasta)
ATGTCGAACC GCACAGCTTA TTTCTACGAC CCGGACGTCG GTAACTTCCA CTATGGTGCT 60
GGCCACCCTA TGAAGCCCCA CCGCCTGTCC CTGACCCACA GCCTGGTGCT GCACTACGGC 120
CTCTACAAGA AGATGATGGT GTTCAAGCCC TACAAGGCCT CTCAACACGA CATGTGCCGC 180
TTCCACTCAG AGGACTACAT TGACTTCCTG CAGAAGGTCA GCCCCAACAA CATGCAGGGC 240
TTCACCAAGA GCCTGAACAC CTTCAACGTC GGTGACGACT GTCCTGTGTT TCCAGGCCTC 300
TTTGAGTTCT GTTCCAGATA CACTGGAGCA TCATTACAAG GAGCTACGCA GCTCAACCAC 360
AAGATCTGTG ACATTGCCAT CAACTGGGCC GGGGGGCTGC ATCATGCTAA GAAGTTTGAG 420
GCTTCAGGGT TTTGCTACGT CAACGATATC GTCATCAGCA TCCTGGAGCT ACTCAAGTAC 480
CACCCTAGGG TGCTCTACAT AGACATCGAC ATTCACCATG GCGACGGCGT ACAGGAAGCC 540
TTCTACCTGA CCGACCGCGT CATGACCGTG TCCTTCCACA AGTACGGGAA CTACTTCTTC 600
CCTGGCACAG TTGCAGGCGA CATGTACGAA GTTGGCGCCG AAAGCGGCCG CTACTATTGC 660
CTCAACGTCC CCCTCCGAGA CGGCATCGAC GACCAGAGCT ACAGACAACT ATTCCAGCCG 720
GTCATCAAGC AGGTTGTCGA TTTCTACCAG CCCACATGCA TAGTTCTGCA GTGTGGAGCC 780
GATTCTCTGG GCTGTGATCG ACTGGGCTGC TTCAACCTCA GTATACGAGG ACACGGGGAG 840
TGTGTGGAGT TTGTGAAGAG CTTTGGCATT CCTCTGTTGG TGCTGGGTGG CGGGGGCTAC 900
ACCGTCAGGA ACGTAGCGCG CTGTTGGACC TACGAGACGT CGCTGCTGGT CGATGAGCCC 960
ATCAGTGATG AGCTGCCTTA TAGCGAGTAC TTTGAGTACT TTGCTCCCGA CTTCACCCTT 1020
CACCCAGACG TCAGCACCAG GATAGAGAAC CAGAACACCA GACAGCAGTA CCTGGAGCAG 1080
ATCCGGCAGA CGGTGTTTGA GAACCTGAAG ATGCTGAACC ACGCCCCCAG CGTGCAGATC 1140
CACGACGTCC CCAACGACCT GCTGAGCTAC GACCGCACGG ACGAGCCCGA CCCCGACGAG 1200
AGGGGGGCCG AGGACGGCTA CAGCAGACCC GAGGCTGCCG GCGAGTTCTA CGACGGCGAC 1260
CACGACAACG ACAAAGAGAG CGACGTGGAG ATCTGA 1297
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Gaa-0203 ENSGACP00000024795.1 Gasterosteus aculeatus 96 0.0 870
WERAM-Leo-0119 ENSLOCP00000014828.1 Lepisosteus oculatus 97 0.0 870
WERAM-Orn-0192 ENSONIP00000019932.1 Oreochromis niloticus 96 0.0 860
WERAM-Pof-0043 ENSPFOP00000003698.2 Poecilia formosa 95 0.0 857
WERAM-Ten-0120 ENSTNIP00000013021.1 Tetraodon nigroviridis 95 0.0 856
WERAM-Xim-0005 ENSXMAP00000000863.1 Xiphophorus maculatus 95 0.0 856
WERAM-Orla-0093 ENSORLP00000011294.1 Oryzias latipes 95 0.0 855
WERAM-Dar-0082 ENSDARP00000054625.5 Danio rerio 95 0.0 852
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 92 0.0 839
WERAM-Meg-0022 ENSMGAP00000001598.1 Meleagris gallopavo 93 0.0 839
WERAM-Gaga-0024 ENSGALP00000004141.3 Gallus gallus 93 0.0 839
WERAM-Anc-0124 ENSACAP00000011701.2 Anolis carolinensis 92 0.0 835
WERAM-Xet-0020 ENSXETP00000005840.3 Xenopus tropicalis 92 0.0 833
WERAM-Tag-0179 ENSTGUP00000015405.1 Taeniopygia guttata 92 0.0 830
WERAM-Sah-0124 ENSSHAP00000012846.1 Sarcophilus harrisii 91 0.0 827
WERAM-Mum-0059 ENSMUSP00000037981.7 Mus musculus 92 0.0 827
WERAM-Sus-0109 ENSSSCP00000015310.2 Sus scrofa 92 0.0 826
WERAM-Poa-0142 ENSPPYP00000017772.1 Pongo abelii 92 0.0 826
WERAM-Paa-0044 ENSPANP00000001672.1 Papio anubis 92 0.0 826
WERAM-Pat-0142 ENSPTRP00000029652.3 Pan troglodytes 92 0.0 826
WERAM-Orc-0086 ENSOCUP00000007738.2 Oryctolagus cuniculus 92 0.0 826
WERAM-Ocp-0150 ENSOPRP00000015465.1 Ochotona princeps 92 0.0 826
WERAM-Myl-0096 ENSMLUP00000007910.2 Myotis lucifugus 92 0.0 826
WERAM-Ict-0140 ENSSTOP00000014542.2 Ictidomys tridecemlineatus 92 0.0 826
WERAM-Hos-0198 ENSP00000302967.3 Homo sapiens 92 0.0 826
WERAM-Gog-0182 ENSGGOP00000015976.2 Gorilla gorilla 92 0.0 826
WERAM-Cap-0155 ENSCPOP00000012861.2 Cavia porcellus 92 0.0 826
WERAM-Caf-0075 ENSCAFP00000030390.2 Canis familiaris 92 0.0 826
WERAM-Caj-0192 ENSCJAP00000033421.2 Callithrix jacchus 92 0.0 826
WERAM-Aim-0114 ENSAMEP00000011012.1 Ailuropoda melanoleuca 92 0.0 826
WERAM-Mae-0008 ENSMEUP00000000621.1 Macropus eugenii 91 0.0 826
WERAM-Eqc-0167 ENSECAP00000018023.1 Equus caballus 91 0.0 825
WERAM-Mup-0085 ENSMPUP00000008127.1 Mustela putorius furo 91 0.0 820
WERAM-Ova-0007 ENSOARP00000000868.1 Ovis aries 91 0.0 820
WERAM-Mod-0086 ENSMODP00000013319.2 Monodelphis domestica 90 0.0 818
WERAM-Dan-0065 ENSDNOP00000006447.2 Dasypus novemcinctus 91 0.0 818
WERAM-Fec-0077 ENSFCAP00000006409.3 Felis catus 91 0.0 816
WERAM-Otg-0013 ENSOGAP00000000543.2 Otolemur garnettii 90 0.0 815
WERAM-Fia-0044 ENSFALP00000003005.1 Ficedula albicollis 93 0.0 808
WERAM-Nol-0100 ENSNLEP00000011707.1 Nomascus leucogenys 90 0.0 807
WERAM-Pes-0041 ENSPSIP00000006305.1 Pelodiscus sinensis 92 0.0 791
WERAM-Ran-0128 ENSRNOP00000071791.1 Rattus norvegicus 86 0.0 771
WERAM-Tut-0154 ENSTTRP00000013027.1 Tursiops truncatus 87 0.0 770
WERAM-Pem-0092 ENSPMAP00000009670.1 Petromyzon marinus 86 0.0 761
WERAM-Ptv-0171 ENSPVAP00000014750.1 Pteropus vampyrus 85 0.0 758
WERAM-Mim-0152 ENSMICP00000015894.1 Microcebus murinus 85 0.0 751
WERAM-Anp-0042 ENSAPLP00000004660.1 Anas platyrhynchos 93 0.0 750
WERAM-Chh-0070 ENSCHOP00000007333.1 Choloepus hoffmanni 91 0.0 729
WERAM-Tar-0077 ENSTRUP00000015206.1 Takifugu rubripes 90 0.0 728
WERAM-Mam-0105 ENSMMUP00000016525.1 Macaca mulatta 92 0.0 717
WERAM-Prc-0116 ENSPCAP00000010084.1 Procavia capensis 81 0.0 714
WERAM-Loa-0085 ENSLAFP00000006680.3 Loxodonta africana 92 0.0 684
WERAM-Cii-0013 ENSCINP00000004801.3 Ciona intestinalis 74 0.0 681
WERAM-Tas-0075 ENSTSYP00000007464.1 Tarsius syrichta 81 0.0 664
WERAM-Cis-0077 ENSCSAVP00000016740.1 Ciona savignyi 73 0.0 659
WERAM-Tub-0054 ENSTBEP00000006507.1 Tupaia belangeri 92 0.0 644
WERAM-Drm-0025 FBpp0078414 Drosophila melanogaster 67 3e-175 612
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 63 2e-154 542
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 61 2e-152 535
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 64 3e-152 535
WERAM-Coi-0024 EAS33504 Coccidioides immitis 62 8e-152 534
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 62 3e-150 528
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 62 3e-150 528
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 64 3e-150 528
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 60 1e-149 526
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 62 1e-149 526
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 61 2e-149 526
WERAM-Sem-0137 EFJ33452 Selaginella moellendorffii 60 2e-149 526
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 60 5e-148 521
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 63 1e-147 520
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 60 7e-147 517
WERAM-Ved-0020 EGY15146 Verticillium dahliae 60 7e-147 517
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 60 1e-146 517
WERAM-Glm-0130 GLYMA11G19290.1 Glycine max 58 2e-146 516
WERAM-Caa-0018 KGT69072 Candida albicans 60 2e-146 516
WERAM-Org-0044 ORGLA04G0087200.1 Oryza glaberrima 58 2e-146 516
WERAM-Kop-0004 CAY67954 Komagataella pastoris 57 2e-146 516
WERAM-Art-0082 AT3G44680.1 Arabidopsis thaliana 57 3e-146 515
WERAM-Orni-0039 ONIVA04G09660.1 Oryza nivara 58 4e-146 515
WERAM-Ori-0051 BGIOSGA016344-PA Oryza indica 58 4e-146 515
WERAM-Orgl-0043 OGLUM04G11380.3 Oryza glumaepatula 58 4e-146 515
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 57 8e-146 514
WERAM-Orbr-0052 OB04G18820.1 Oryza brachyantha 58 1e-145 513
WERAM-Cag-0003 CAG57932 Candida glabrata 60 1e-145 513
WERAM-Chr-0011 EDP01149 Chlamydomonas reinhardtii 57 2e-145 513
WERAM-Bro-0059 Bo3g120880.1 Brassica oleracea 57 2e-145 513
WERAM-Met-0097 AES88434 Medicago truncatula 57 2e-145 513
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 57 3e-145 512
WERAM-Brr-0098 Bra019424.1-P Brassica rapa 57 5e-145 511
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 58 7e-145 511
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 58 7e-145 511
WERAM-Pot-0020 POPTR_0001s46430.1 Populus trichocarpa 57 9e-145 510
WERAM-Trv-0003 EHK19072 Trichoderma virens 61 1e-144 510
WERAM-Sob-0086 Sb06g015420.1 Sorghum bicolor 60 1e-144 510
WERAM-Thc-0114 EOY33523 Theobroma cacao 56 2e-144 509
WERAM-Orr-0042 ORUFI04G12890.1 Oryza rufipogon 58 2e-144 509
WERAM-Orb-0042 OBART04G11700.1 Oryza barthii 58 2e-144 509
WERAM-Mua-0089 GSMUA_Achr6P17260_001 Musa acuminata 57 4e-144 508
WERAM-Asg-0034 AAS54885 Ashbya gossypii 58 7e-144 507
WERAM-Orp-0042 OPUNC04G09700.1 Oryza punctata 56 1e-143 506
WERAM-Amt-0048 ERN13133 Amborella trichopoda 56 2e-143 506
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 61 2e-143 506
WERAM-Sei-0035 Si010167m Setaria italica 59 2e-143 506
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 58 4e-143 505
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 56 1e-142 503
WERAM-Trr-0017 EGR48353 Trichoderma reesei 61 1e-142 503
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 55 2e-142 502
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 60 3e-142 502
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 60 5e-142 501
WERAM-Arl-0024 fgenesh1_pg.C_scaffold_5000937 Arabidopsis lyrata 55 6e-142 501
WERAM-Viv-0093 VIT_15s0021g00610.t01 Vitis vinifera 57 8e-142 501
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 59 9e-142 500
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 61 2e-141 499
WERAM-Prp-0056 EMJ02177 Prunus persica 61 2e-141 499
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 62 5e-141 498
WERAM-Zem-0071 GRMZM2G119703_P01 Zea mays 60 6e-141 498
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 55 7e-141 497
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 59 7e-141 497
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 62 1e-140 497
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 58 3e-140 495
Created Date 25-Jun-2016