Tag |
Content |
WERAM ID |
WERAM-Sus-0109 |
Ensembl Protein ID |
ENSSSCP00000015310.2 |
Gene Name |
HDAC3 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
6.10e-170 |
565.1 |
4 |
390 |
|
Organism |
Sus scrofa |
Domain Profile |
HDAC Class-I
class-1.txt 2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge 90 +vay+yd+dvg++hyg++hpmkp+rl+lth+Lvl+ygl+kk+ ++kp +as++++++fhse+yi+fl++v+p+n++ ++k+l+ fnvg+ ENSSSCP00000015310.2 4 TVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGD 92 79*************************************************************************************** PP class-1.txt 91 dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeaf 179 dcPvf glfe+c+ +tGasl++a++Ln+k +diainwaGGlhhakk easGfcyvnDiv++ilellk+h+rvlyidid+hhGDgv+eaf ENSSSCP00000015310.2 93 DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAF 181 ***************************************************************************************** PP class-1.txt 180 yttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefn 268 y tdrvmtvsfhkyg++ffPgtGd+++vgae+g+yy++nvPl+dgidD+sy+++f++vi++v+++++P+++vlqcGaDsl +Drlg+fn ENSSSCP00000015310.2 182 YLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFN 270 ***************************************************************************************** PP class-1.txt 269 lsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313 lsi+gh+ecv++vksfn+pllvlGGGGYt+rnvaRcwtyet++++ ENSSSCP00000015310.2 271 LSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLV 315 ******************************************986 PP class-1.txt 228 esyekifksviskv.ieafePeavvlqcGaDslagDrl 264 +++ +i +++ +++ + + P++ + ++ aD l+ Dr ENSSSCP00000015310.2 353 QYLDQIRQTIFENLkMLNHAPSVQIHDVPADLLTYDRT 390 67788999999887456799**************9996 PP
|
Protein Sequence (Fasta) | MAKTVAYFYD PDVGNFHYGA GHPMKPHRLA LTHSLVLHYG LYKKMIVFKP YQASQHDMCR 60 FHSEDYIDFL QRVSPTNMQG FTKSLNAFNV GDDCPVFPGL FEFCSRYTGA SLQGATQLNN 120 KICDIAINWA GGLHHAKKFE ASGFCYVNDI VIGILELLKY HPRVLYIDID IHHGDGVQEA 180 FYLTDRVMTV SFHKYGNYFF PGTGDMYEVG AESGRYYCLN VPLRDGIDDQ SYKHLFQPVI 240 NQVVDFYQPT CIVLQCGADS LGCDRLGCFN LSIRGHGECV EYVKSFNIPL LVLGGGGYTV 300 RNVARCWTYE TSLLVEEAIS EELPYSEYFE YFAPDFTLHP DVSTRIENQN SRQYLDQIRQ 360 TIFENLKMLN HAPSVQIHDV PADLLTYDRT DEADAEERGP EENYSRPEAP NEFYDGDHDN 420 DKESDVEI 428Protein Fasta Sequence
>ENSSSCP00000015310.2|Class-I|Sus scrofa MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDNDKESDVEI
|
Nucleotide Sequence (Fasta) | GGTTCCGCAG AGACTGGCTG CGTGCTTACG CAGCACGCAC GACCGGGGGT GGGGCTGGCG 60 GCCAGGCTGG CGGCGGAGGC GCGGGGCCTG GTCCCGCTGG CACCATGGCC AAGACTGTGG 120 CCTATTTCTA CGACCCCGAC GTGGGCAACT TCCACTACGG GGCTGGGCAC CCTATGAAGC 180 CCCATCGCTT GGCCTTGACC CATAGTCTGG TCCTGCACTA CGGTCTTTAT AAGAAGATGA 240 TCGTCTTCAA GCCGTACCAG GCCTCCCAGC ATGACATGTG CCGCTTCCAC TCTGAGGACT 300 ACATTGACTT CCTGCAGAGA GTCAGTCCCA CCAACATGCA AGGCTTCACC AAGAGCCTGA 360 ATGCCTTCAA CGTGGGCGAT GACTGCCCAG TGTTTCCGGG GCTCTTTGAG TTCTGCTCCC 420 GTTACACAGG CGCATCTCTG CAAGGAGCAA CGCAGCTGAA CAACAAGATC TGTGACATTG 480 CCATTAACTG GGCTGGTGGC CTGCACCATG CCAAGAAGTT TGAGGCTTCC GGCTTCTGCT 540 ACGTCAACGA CATTGTGATC GGCATCCTGG AGCTGCTCAA GTACCACCCC CGCGTGCTCT 600 ACATTGACAT TGACATCCAC CACGGGGACG GGGTTCAGGA GGCCTTCTAC CTCACCGACC 660 GGGTCATGAC AGTGTCCTTC CACAAATACG GGAACTACTT CTTCCCCGGC ACAGGTGACA 720 TGTACGAAGT CGGAGCCGAG AGCGGCCGCT ACTACTGCCT CAATGTGCCC CTGCGGGATG 780 GCATCGATGA CCAGAGTTAC AAGCACCTCT TCCAGCCAGT CATCAACCAG GTGGTGGACT 840 TCTACCAACC CACGTGCATT GTGCTCCAGT GCGGAGCCGA CTCCCTGGGC TGTGATCGAT 900 TGGGCTGCTT CAACCTCAGC ATTCGAGGTC ACGGCGAGTG CGTCGAATAC GTCAAGAGCT 960 TCAACATCCC TCTGCTGGTG CTCGGGGGCG GCGGCTACAC GGTCCGGAAC GTCGCCCGCT 1020 GCTGGACGTA TGAGACATCA CTGCTGGTGG AAGAGGCCAT AAGCGAGGAG CTCCCCTATA 1080 GTGAATACTT TGAGTACTTT GCCCCGGACT TCACGCTCCA TCCAGACGTC AGCACCCGCA 1140 TTGAGAATCA GAACTCACGC CAGTATCTGG ACCAGATCCG CCAGACAATC TTTGAAAACC 1200 TGAAGATGCT GAACCACGCA CCCAGCGTCC AGATTCACGA CGTGCCCGCA GACCTCCTGA 1260 CCTACGACAG GACTGACGAG GCCGACGCCG AGGAGAGGGG CCCCGAGGAG AATTACAGCA 1320 GGCCGGAGGC GCCCAATGAG TTCTATGACG GAGACCATGA CAATGACAAG GAAAGCGATG 1380 TGGAAATTTA AGACTGACTG GGCTTGCCGT GTCCCCAGGA ATTTCTTTTT TCCTCTTAGT 1440 TGGGTGGGAG GGAAAAGGTG TGACTCCCCT ACCCCTGGTC TGGTTACTTT CAGGGCAGTT 1500 ACCAACACCG GGGGAGGCTT TGGAGACCAC CTCTGGTTCT TGAACCAGCT GTTCCCTTTC 1560 TTCTCCCTCT CAAGGCTAGA CCACGGTACC TGTTAGGGAT CGGATGGGGA TAAGGATAGA 1620 CGTCTCTAGG ACCTCTCGGG CCGTGGGCCC TAGAGGCCAG TCCCAGCCCT TCTGGCTTCC 1680 TCATTCCTTC TCTGCTTCCC TCCAACCCAG AGACTTTGGG GATGAAGGAA TAGGCAGCAG 1740 TACGGTTGCT TCTGACGTCC ACCTCCCCAG GCTTCTCCTA CTGCAAGCCT TGCTTCCAGG 1800 TGAAGAGTAA GGGATTTTAG GGAGCCCTGG CCCCCTAATA CTTTAACCCA GATAATGGGA 1860 AGTGTGACTT GGAAAGGGGG GAGGATATGA AAATGTCCTG CTCTAACTTT TGGCTTTATG 1920 TCCATTTTAC CACTGTTTTT ATCCAATAAA CCGAGTTGGT ATTTTTTGTA CCTTTTGCCT 1980 TCTGGGAATG TTTTTTTATT TTTTGGCTTT TTTGCATTTT CTAGAGCCGC TCCTGAGGCA 2040 TAGGGAGGTT CCCAGGCTAG GGGTCTAATC GGAGCTGTAG CCACCGGCCT ACGCCAGAGC 2100 CACAGCAGTG CGGGATCTGA GCCGCGTCTG CAACCTACAC CACAGCTCAC GGCAGCGCCA 2160 GATCCTTAAC CCAATGAGCA AGGCCAGGGA TCGAACCTGC AACCTCATGG TTCCTAGTCG 2220 GATTCGTAAA CCACTGCACC ACGACGGGAA CTCCGTGGGA ATGTTCTTAA TTCTTGCTAG 2280 CTGTCTGTGC ACGAAGAGCG AGGAGATGGG TTAATATGTA TATAATAAAA ATCATGGTAA 2340 ACATTCATTC TGC
2354Nucleotide Fasta Sequence
>ENSSSCP00000015310.2|Class-I|Sus scrofa GGTTCCGCAGAGACTGGCTGCGTGCTTACGCAGCACGCACGACCGGGGGTGGGGCTGGCGGCCAGGCTGGCGGCGGAGGCGCGGGGCCTGGTCCCGCTGGCACCATGGCCAAGACTGTGGCCTATTTCTACGACCCCGACGTGGGCAACTTCCACTACGGGGCTGGGCACCCTATGAAGCCCCATCGCTTGGCCTTGACCCATAGTCTGGTCCTGCACTACGGTCTTTATAAGAAGATGATCGTCTTCAAGCCGTACCAGGCCTCCCAGCATGACATGTGCCGCTTCCACTCTGAGGACTACATTGACTTCCTGCAGAGAGTCAGTCCCACCAACATGCAAGGCTTCACCAAGAGCCTGAATGCCTTCAACGTGGGCGATGACTGCCCAGTGTTTCCGGGGCTCTTTGAGTTCTGCTCCCGTTACACAGGCGCATCTCTGCAAGGAGCAACGCAGCTGAACAACAAGATCTGTGACATTGCCATTAACTGGGCTGGTGGCCTGCACCATGCCAAGAAGTTTGAGGCTTCCGGCTTCTGCTACGTCAACGACATTGTGATCGGCATCCTGGAGCTGCTCAAGTACCACCCCCGCGTGCTCTACATTGACATTGACATCCACCACGGGGACGGGGTTCAGGAGGCCTTCTACCTCACCGACCGGGTCATGACAGTGTCCTTCCACAAATACGGGAACTACTTCTTCCCCGGCACAGGTGACATGTACGAAGTCGGAGCCGAGAGCGGCCGCTACTACTGCCTCAATGTGCCCCTGCGGGATGGCATCGATGACCAGAGTTACAAGCACCTCTTCCAGCCAGTCATCAACCAGGTGGTGGACTTCTACCAACCCACGTGCATTGTGCTCCAGTGCGGAGCCGACTCCCTGGGCTGTGATCGATTGGGCTGCTTCAACCTCAGCATTCGAGGTCACGGCGAGTGCGTCGAATACGTCAAGAGCTTCAACATCCCTCTGCTGGTGCTCGGGGGCGGCGGCTACACGGTCCGGAACGTCGCCCGCTGCTGGACGTATGAGACATCACTGCTGGTGGAAGAGGCCATAAGCGAGGAGCTCCCCTATAGTGAATACTTTGAGTACTTTGCCCCGGACTTCACGCTCCATCCAGACGTCAGCACCCGCATTGAGAATCAGAACTCACGCCAGTATCTGGACCAGATCCGCCAGACAATCTTTGAAAACCTGAAGATGCTGAACCACGCACCCAGCGTCCAGATTCACGACGTGCCCGCAGACCTCCTGACCTACGACAGGACTGACGAGGCCGACGCCGAGGAGAGGGGCCCCGAGGAGAATTACAGCAGGCCGGAGGCGCCCAATGAGTTCTATGACGGAGACCATGACAATGACAAGGAAAGCGATGTGGAAATTTAAGACTGACTGGGCTTGCCGTGTCCCCAGGAATTTCTTTTTTCCTCTTAGTTGGGTGGGAGGGAAAAGGTGTGACTCCCCTACCCCTGGTCTGGTTACTTTCAGGGCAGTTACCAACACCGGGGGAGGCTTTGGAGACCACCTCTGGTTCTTGAACCAGCTGTTCCCTTTCTTCTCCCTCTCAAGGCTAGACCACGGTACCTGTTAGGGATCGGATGGGGATAAGGATAGACGTCTCTAGGACCTCTCGGGCCGTGGGCCCTAGAGGCCAGTCCCAGCCCTTCTGGCTTCCTCATTCCTTCTCTGCTTCCCTCCAACCCAGAGACTTTGGGGATGAAGGAATAGGCAGCAGTACGGTTGCTTCTGACGTCCACCTCCCCAGGCTTCTCCTACTGCAAGCCTTGCTTCCAGGTGAAGAGTAAGGGATTTTAGGGAGCCCTGGCCCCCTAATACTTTAACCCAGATAATGGGAAGTGTGACTTGGAAAGGGGGGAGGATATGAAAATGTCCTGCTCTAACTTTTGGCTTTATGTCCATTTTACCACTGTTTTTATCCAATAAACCGAGTTGGTATTTTTTGTACCTTTTGCCTTCTGGGAATGTTTTTTTATTTTTTGGCTTTTTTGCATTTTCTAGAGCCGCTCCTGAGGCATAGGGAGGTTCCCAGGCTAGGGGTCTAATCGGAGCTGTAGCCACCGGCCTACGCCAGAGCCACAGCAGTGCGGGATCTGAGCCGCGTCTGCAACCTACACCACAGCTCACGGCAGCGCCAGATCCTTAACCCAATGAGCAAGGCCAGGGATCGAACCTGCAACCTCATGGTTCCTAGTCGGATTCGTAAACCACTGCACCACGACGGGAACTCCGTGGGAATGTTCTTAATTCTTGCTAGCTGTCTGTGCACGAAGAGCGAGGAGATGGGTTAATATGTATATAATAAAAATCATGGTAAACATTCATTCTGC
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |