| Tag |
Content |
| WERAM ID |
WERAM-Org-0044 |
| Ensembl Protein ID |
ORGLA04G0087200.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
1.90e-162 |
540.8 |
6 |
317 |
|
| Organism |
Oryza glaberrima |
| Domain Profile |
HDAC Class-I
class-1.txt 2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcP 93
++ay+yd dvg++++g +hpmkp+rl++th+Lvl+y+l+kk+ei++p+ka +el++fhs +y+efl++++p++++ +++el+++n+gedcP
ORGLA04G0087200.1 6 RIAYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPTELAQFHSADYVEFLHRITPDTQHLYENELRRYNLGEDCP 97
689***************************************************************************************** PP
class-1.txt 94 vfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrv 185
vfd+lfe+cq+++G++l+aa++Ln+k++diainwaGGlhhakk+easGfcy+nD+vl+ilellk+h rvlyidid+hhGDgveeafy+tdrv
ORGLA04G0087200.1 98 VFDNLFEFCQIYAGGTLDAARRLNHKTCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRV 189
******************************************************************************************** PP
class-1.txt 186 mtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaec 277
mtvsfhkyg+ ffPgtGd++dvg+ +gkyya+n+PlkdgidD+ ++++fk+vi kv+e++ P a+vlqcGaDsla+Drlg+fnlsi+ghaec
ORGLA04G0087200.1 190 MTVSFHKYGDFFFPGTGDIKDVGEREGKYYAINIPLKDGIDDSGFTRLFKTVIAKVVETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAEC 281
******************************************************************************************** PP
class-1.txt 278 vkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
vkfvk+fn+pllv GGGGYt++nvaRcw++et+v+l
ORGLA04G0087200.1 282 VKFVKKFNIPLLVTGGGGYTKENVARCWAVETGVLL 317
**********************************97 PP
|
Protein Sequence
(Fasta) | MLEKDRIAYF YDGDVGNVYF GPNHPMKPHR LCMTHHLVLS YDLHKKMEIY RPHKAYPTEL 60
AQFHSADYVE FLHRITPDTQ HLYENELRRY NLGEDCPVFD NLFEFCQIYA GGTLDAARRL 120
NHKTCDIAIN WAGGLHHAKK CEASGFCYIN DLVLGILELL KYHARVLYID IDVHHGDGVE 180
EAFYFTDRVM TVSFHKYGDF FFPGTGDIKD VGEREGKYYA INIPLKDGID DSGFTRLFKT 240
VIAKVVETYL PGAIVLQCGA DSLARDRLGC FNLSIEGHAE CVKFVKKFNI PLLVTGGGGY 300
TKENVARCWA VETGVLLDTE LPNEIPDNEY IKYFAPDYTL KVSNVNMDNL NSKSYLSSIK 360
VQVMESLRAI QHAPGVQMQE VPPDFYIPDI DEDELDPDER VDQHTQDKQI HRDDEYYEGD 420
NDNDHEDGAR Protein Fasta Sequence
>ORGLA04G0087200.1|Class-I|Oryza glaberrima
MLEKDRIAYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPTELAQFHSADYVEFLHRITPDTQHLYENELRRYNLGEDCPVFDNLFEFCQIYAGGTLDAARRLNHKTCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDFFFPGTGDIKDVGEREGKYYAINIPLKDGIDDSGFTRLFKTVIAKVVETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKKFNIPLLVTGGGGYTKENVARCWAVETGVLLDTELPNEIPDNEYIKYFAPDYTLKVSNVNMDNLNSKSYLSSIKVQVMESLRAIQHAPGVQMQEVPPDFYIPDIDEDELDPDERVDQHTQDKQIHRDDEYYEGDNDNDHEDGAR |
Nucleotide Sequence
(Fasta) | ATGTTGGAGA AAGACAGGAT AGCCTACTTC TACGATGGCG ATGTGGGCAA TGTCTACTTT 60
GGGCCAAATC ACCCGATGAA ACCACATCGA CTTTGTATGA CACATCATCT TGTGCTTTCA 120
TATGATCTTC ACAAGAAGAT GGAGATATAT AGGCCCCACA AAGCATATCC AACAGAGCTC 180
GCACAGTTCC ATTCTGCTGA TTATGTGGAA TTCTTGCATC GGATAACTCC TGACACCCAA 240
CACCTGTATG AAAATGAATT ACGTAGATAC AATCTTGGAG AAGACTGCCC AGTCTTTGAT 300
AATCTGTTTG AGTTTTGCCA AATATATGCT GGAGGAACTC TAGATGCGGC TCGCAGATTG 360
AATCATAAAA CATGTGATAT TGCTATCAAT TGGGCTGGTG GATTGCATCA TGCAAAGAAG 420
TGCGAGGCAT CAGGGTTCTG CTACATTAAT GATCTGGTTT TGGGAATTCT GGAGCTTCTC 480
AAGTACCATG CCAGGGTTCT CTATATTGAT ATCGATGTTC ATCACGGGGA TGGAGTTGAA 540
GAAGCCTTTT ATTTCACTGA CAGGGTAATG ACTGTAAGTT TCCACAAGTA TGGTGATTTT 600
TTCTTCCCTG GCACAGGTGA TATTAAGGAT GTAGGAGAAA GAGAAGGAAA ATATTATGCC 660
ATTAACATTC CACTTAAAGA TGGGATAGAT GACTCCGGCT TTACTCGCCT TTTTAAAACA 720
GTTATTGCCA AAGTTGTTGA GACATATCTG CCAGGTGCTA TTGTTCTTCA ATGCGGGGCT 780
GATTCCTTGG CACGGGACCG TCTGGGGTGC TTCAATCTGT CCATTGAAGG CCATGCTGAA 840
TGTGTGAAGT TTGTCAAGAA ATTCAATATC CCTCTACTGG TGACTGGGGG TGGTGGATAC 900
ACAAAAGAGA ATGTAGCACG CTGTTGGGCT GTTGAAACTG GTGTTCTTCT AGATACGGAG 960
CTCCCAAATG AAATTCCAGA CAATGAATAC ATCAAATACT TTGCTCCAGA TTATACATTG 1020
AAAGTATCGA ATGTGAACAT GGACAACTTG AATAGCAAGT CATATCTAAG TTCAATCAAA 1080
GTGCAAGTCA TGGAGAGTTT GCGGGCCATA CAACATGCGC CTGGTGTTCA GATGCAAGAG 1140
GTTCCACCAG ATTTTTATAT CCCAGATATT GATGAAGATG AGCTGGATCC TGATGAACGT 1200
GTAGATCAGC ATACCCAAGA CAAGCAGATT CATCGCGATG ACGAGTACTA TGAAGGTGAC 1260
AACGACAATG ATCATGAGGA CGGGGCCCGT TGA
1294Nucleotide Fasta Sequence
>ORGLA04G0087200.1|Class-I|Oryza glaberrima
ATGTTGGAGAAAGACAGGATAGCCTACTTCTACGATGGCGATGTGGGCAATGTCTACTTTGGGCCAAATCACCCGATGAAACCACATCGACTTTGTATGACACATCATCTTGTGCTTTCATATGATCTTCACAAGAAGATGGAGATATATAGGCCCCACAAAGCATATCCAACAGAGCTCGCACAGTTCCATTCTGCTGATTATGTGGAATTCTTGCATCGGATAACTCCTGACACCCAACACCTGTATGAAAATGAATTACGTAGATACAATCTTGGAGAAGACTGCCCAGTCTTTGATAATCTGTTTGAGTTTTGCCAAATATATGCTGGAGGAACTCTAGATGCGGCTCGCAGATTGAATCATAAAACATGTGATATTGCTATCAATTGGGCTGGTGGATTGCATCATGCAAAGAAGTGCGAGGCATCAGGGTTCTGCTACATTAATGATCTGGTTTTGGGAATTCTGGAGCTTCTCAAGTACCATGCCAGGGTTCTCTATATTGATATCGATGTTCATCACGGGGATGGAGTTGAAGAAGCCTTTTATTTCACTGACAGGGTAATGACTGTAAGTTTCCACAAGTATGGTGATTTTTTCTTCCCTGGCACAGGTGATATTAAGGATGTAGGAGAAAGAGAAGGAAAATATTATGCCATTAACATTCCACTTAAAGATGGGATAGATGACTCCGGCTTTACTCGCCTTTTTAAAACAGTTATTGCCAAAGTTGTTGAGACATATCTGCCAGGTGCTATTGTTCTTCAATGCGGGGCTGATTCCTTGGCACGGGACCGTCTGGGGTGCTTCAATCTGTCCATTGAAGGCCATGCTGAATGTGTGAAGTTTGTCAAGAAATTCAATATCCCTCTACTGGTGACTGGGGGTGGTGGATACACAAAAGAGAATGTAGCACGCTGTTGGGCTGTTGAAACTGGTGTTCTTCTAGATACGGAGCTCCCAAATGAAATTCCAGACAATGAATACATCAAATACTTTGCTCCAGATTATACATTGAAAGTATCGAATGTGAACATGGACAACTTGAATAGCAAGTCATATCTAAGTTCAATCAAAGTGCAAGTCATGGAGAGTTTGCGGGCCATACAACATGCGCCTGGTGTTCAGATGCAAGAGGTTCCACCAGATTTTTATATCCCAGATATTGATGAAGATGAGCTGGATCCTGATGAACGTGTAGATCAGCATACCCAAGACAAGCAGATTCATCGCGATGACGAGTACTATGAAGGTGACAACGACAATGATCATGAGGACGGGGCCCGTTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
