WERAM Information


Tag Content
WERAM ID WERAM-Xet-0037
Ensembl Protein ID ENSXETP00000011480.3
Gene Name hdac1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSXETG00000005253.3 ENSXETT00000011480.3 ENSXETP00000011480.3
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.90e-175 583 9 320
Organism Xenopus tropicalis
Domain Profile
  HDAC Class-I

           class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89 
kkv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+kasaee++k+hs++yi+fl++++p+n++e+sk++++fnvg
ENSXETP00000011480.3 9 KKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVG 97
589************************************************************************************** PP
class-1.txt 90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
edcPvfdglfe+cql+tG+s++++ kLnk+++di++nw+GGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea
ENSXETP00000011480.3 98 EDCPVFDGLFEFCQLSTGGSVASSVKLNKQQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
***************************************************************************************** PP
class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+ifk+v+skv+e+++P+avvlqcGaDsl+gDrlg+f
ENSXETP00000011480.3 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMYQPSAVVLQCGADSLSGDRLGCF 274
*****************.*********************************************************************** PP
class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
nl+ikgha+cv+f+k+fnlpll+lGGGGYt+rnvaRcwtyetav+l
ENSXETP00000011480.3 275 NLTIKGHAKCVEFIKTFNLPLLMLGGGGYTIRNVARCWTYETAVAL 320
*******************************************987 PP

Protein Sequence
(Fasta)
MALSQGTKKK VCYYYDGDVG NYYYGQGHPM KPHRIRMTHN LLLNYGLYRK MEIYRPHKAS 60
AEEMTKYHSD DYIKFLRSIR PDNMSEYSKQ MQRFNVGEDC PVFDGLFEFC QLSTGGSVAS 120
SVKLNKQQTD ISVNWSGGLH HAKKSEASGF CYVNDIVLAI LELLKYHQRV LYIDIDIHHG 180
DGVEEAFYTT DRVMTVSFHK YGEYFPGTGD LRDIGAGKGK YYAVNYPLRD GIDDESYEAI 240
FKPVMSKVME MYQPSAVVLQ CGADSLSGDR LGCFNLTIKG HAKCVEFIKT FNLPLLMLGG 300
GGYTIRNVAR CWTYETAVAL DSEIPNELPY NDYFEYFGPD FKLHISPSNM TNQNTNEYLE 360
KIKQRLFENL RMLPHAPGVQ MQAIPEDSVH DDSGEEDEED PDKRISIRSS DKRIACDEEF 420
SDSEDEGEGG RRNVASFKKV KRVKTEEEKD GEEKKDVKEE EKPKDEKTDS KRVKEETKSA 480
Nucleotide Sequence
(Fasta)
CGCGGAAGGA AAATGGCGCT GAGTCAAGGA ACAAAGAAGA AAGTGTGCTA TTACTATGAT 60
GGTGATGTTG GAAATTATTA TTATGGACAG GGGCATCCCA TGAAACCTCA TAGAATTCGT 120
ATGACACACA ACCTGCTGCT GAACTATGGA CTTTACCGGA AAATGGAGAT CTATAGACCC 180
CACAAAGCCA GTGCAGAAGA GATGACAAAG TATCACAGTG ATGATTATAT AAAATTCCTG 240
CGCTCCATAC GACCAGACAA TATGTCCGAA TACAGTAAAC AGATGCAGAG ATTTAATGTT 300
GGTGAGGACT GTCCAGTGTT TGATGGCTTG TTTGAATTCT GCCAACTCTC CACGGGGGGC 360
TCTGTAGCAA GCTCTGTTAA ACTAAACAAA CAACAGACGG ACATTTCAGT AAACTGGTCT 420
GGTGGCCTTC ATCATGCCAA GAAATCTGAG GCATCTGGTT TTTGTTATGT CAACGATATT 480
GTCCTTGCCA TCCTGGAACT ATTGAAGTAT CACCAGAGAG TTCTGTATAT TGATATAGAC 540
ATTCACCACG GTGATGGTGT GGAGGAGGCC TTTTACACAA CTGATAGAGT TATGACAGTA 600
TCCTTCCACA AGTATGGAGA GTATTTTCCT GGAACTGGTG ATCTGAGAGA TATTGGTGCA 660
GGGAAAGGCA AATATTATGC TGTGAATTAT CCCTTACGGG ATGGAATTGA TGATGAGTCC 720
TATGAAGCAA TTTTTAAACC AGTAATGTCT AAAGTTATGG AGATGTACCA GCCCAGTGCA 780
GTGGTCCTAC AGTGTGGAGC AGATTCCTTA TCCGGGGATA GACTTGGATG TTTCAATTTG 840
ACCATCAAAG GACATGCCAA GTGTGTGGAG TTCATAAAGA CCTTTAACTT GCCACTGCTT 900
ATGCTAGGAG GTGGAGGTTA CACTATCAGG AATGTGGCTC GTTGCTGGAC ATATGAAACA 960
GCTGTGGCTC TGGACTCTGA GATCCCTAAT GAGCTTCCAT ACAATGATTA TTTTGAATAT 1020
TTTGGGCCAG ACTTCAAGCT TCATATCAGT CCATCCAACA TGACCAATCA GAACACTAAT 1080
GAATATCTGG AGAAAATCAA GCAGCGCCTT TTTGAGAACT TGCGCATGCT TCCTCATGCT 1140
CCAGGAGTCC AGATGCAAGC CATCCCAGAG GACTCTGTAC ATGATGACAG TGGTGAAGAA 1200
GATGAGGAAG ATCCTGACAA GCGCATTTCC ATTCGGTCAT CGGATAAAAG GATTGCGTGT 1260
GATGAGGAGT TCTCTGATTC TGAAGATGAA GGGGAAGGAG GTCGCAGAAA CGTGGCCAGT 1320
TTCAAGAAAG TAAAACGGGT TAAAACAGAG GAGGAAAAGG ATGGAGAAGA AAAGAAAGAT 1380
GTTAAAGAAG AGGAGAAACC TAAAGATGAG AAGACAGACA GCAAACGGGT AAAAGAAGAG 1440
ACCAAATCTG CCTGATCCTT CATGTATGGG GAAGAAGTCC CAAGACCAAT GAATTCCTAT 1500
GGTTTTATAT TTTATATATG CCCTGTACAG AACCCTTTCT ATAAAAGTCC CAGCACAGGC 1560
TAAATTATTC TTCCCACTGG CTGAGGGGGG GGGGAGGTAA AGTGGTCATT GTAGTGGAAT 1620
AGTTGAACTT CACATCTGTT ACCTTTTTAC CAGATGTTTT CTTTCTTTTT TTTTTTTAAC 1680
TTTCCTAATT TTCTTGTGCC CCTGTAATCC TCAGCGGTGC AATGCATTAT GGATATATTT 1740
CTCTGCTCCC TTCCATACAC ACTTCTGCCA TCAGACACCA AGACTTTTCT GATACAGTAC 1800
ATTGGAAATA TGTATGCCTT ATGCTCAGGA TCAGGCGGTG AAATGGAGGG GGGATCCAGC 1860
CGTCTTCCAA ATGGGTTTGA GAGGGTTGTT TTGTTTTCTC TAGGGATGGG GAGAAGCTGA 1920
AGGTCCTCTC TTCCACTAAA CTATTCAGGG ATTCCCTGTT CTCTTAATGC TGCTAACCCT 1980
CCTCCAGATT AGTTCATGAA GCAGACTTTT AGATGTGGGG AAACCTGGTT CACAGTTACC 2040
TCATAATGTG GAATGTGGGT ATTTCTATTT AGGTTTCTGC CTTCAATAAT AGTGGGATGG 2100
AGAGTGTTGG GATTCATGGA ATGAAGGAAA GGAGAATTTT TATGTCCAAT TTTTGTGATG 2160
GGAAATTTCT TTTTTTTTAT GGTTGAGTTG TGGAAAAGCT TTGTAATAAA ACCTGGTACT 2220
TATACCTT 2229
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 94 0.0 781
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 94 0.0 781
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 94 0.0 780
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 94 0.0 780
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 94 0.0 780
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 94 0.0 780
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 94 0.0 780
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 94 0.0 780
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 94 0.0 780
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 94 0.0 779
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 94 0.0 779
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 94 0.0 779
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 94 0.0 778
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 93 0.0 778
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 93 0.0 778
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 93 0.0 776
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 93 0.0 775
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 93 0.0 773
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 93 0.0 772
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 93 0.0 772
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 94 0.0 769
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 92 0.0 769
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 94 0.0 768
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 93 0.0 766
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 94 0.0 765
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 94 0.0 765
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 94 0.0 765
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 93 0.0 762
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 94 0.0 761
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 95 0.0 759
WERAM-Fia-0005 ENSFALP00000000658.1 Ficedula albicollis 93 0.0 759
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 92 0.0 755
WERAM-Xim-0002 ENSXMAP00000000390.1 Xiphophorus maculatus 96 0.0 754
WERAM-Orn-0090 ENSONIP00000010308.1 Oreochromis niloticus 94 0.0 753
WERAM-Pof-0067 ENSPFOP00000005770.2 Poecilia formosa 96 0.0 753
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 94 0.0 752
WERAM-Orla-0151 ENSORLP00000017757.1 Oryzias latipes 95 0.0 751
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 94 0.0 750
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 93 0.0 750
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 93 0.0 749
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 92 0.0 748
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 95 0.0 746
WERAM-Mod-0160 ENSMODP00000021783.2 Monodelphis domestica 92 0.0 740
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 93 0.0 739
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 93 0.0 739
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 93 0.0 736
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 92 0.0 736
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 94 0.0 733
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 94 0.0 733
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 94 0.0 728
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 94 0.0 726
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 92 0.0 712
WERAM-Mam-0083 ENSMMUP00000013015.2 Macaca mulatta 94 0.0 711
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 88 0.0 699
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 84 0.0 697
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 86 0.0 695
WERAM-Dio-0132 ENSDORP00000012520.1 Dipodomys ordii 87 0.0 667
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 84 0.0 663
WERAM-Mim-0092 ENSMICP00000008598.1 Microcebus murinus 83 0.0 634
WERAM-Mae-0030 ENSMEUP00000002192.1 Macropus eugenii 81 7e-179 624
WERAM-Tub-0143 ENSTBEP00000015305.1 Tupaia belangeri 87 3e-178 622
WERAM-Pem-0096 ENSPMAP00000010023.1 Petromyzon marinus 81 5e-177 618
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 70 3e-164 575
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 69 7e-164 574
WERAM-Soa-0003 ENSSARP00000000316.1 Sorex araneus 80 1e-162 570
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 69 2e-162 569
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 68 4e-162 568
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 68 7e-162 567
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 68 7e-162 567
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 68 1e-160 563
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 68 3e-160 562
WERAM-Coi-0024 EAS33504 Coccidioides immitis 67 7e-160 561
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 71 8e-160 560
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 67 1e-159 560
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 66 9e-159 557
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 68 2e-158 556
WERAM-Ved-0020 EGY15146 Verticillium dahliae 66 5e-158 555
WERAM-Amt-0072 ERN20455 Amborella trichopoda 68 1e-157 553
WERAM-Prp-0060 EMJ10303 Prunus persica 67 2e-157 553
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 67 2e-157 552
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 67 2e-157 552
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 67 3e-157 552
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 67 6e-157 551
WERAM-Glm-0046 GLYMA05G02540.1 Glycine max 67 2e-156 550
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 68 2e-156 549
WERAM-Trv-0003 EHK19072 Trichoderma virens 66 2e-156 549
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 66 2e-155 546
WERAM-Thc-0029 EOY20838 Theobroma cacao 66 2e-155 546
WERAM-Trr-0017 EGR48353 Trichoderma reesei 66 3e-155 545
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 68 4e-155 545
WERAM-Met-0068 AES71453 Medicago truncatula 65 5e-155 545
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 68 7e-155 544
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 68 8e-155 544
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 68 1e-154 543
WERAM-Brr-0180 Bra035858.1-P Brassica rapa 67 1e-154 543
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 68 1e-154 543
WERAM-Zyt-0024 Mycgr3P51809 Zymoseptoria tritici 67 1e-154 543
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 69 1e-154 543
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 68 1e-154 543
WERAM-Bro-0169 Bo9g017510.1 Brassica oleracea 67 3e-154 542
WERAM-Pot-0149 POPTR_0015s09400.1 Populus trichocarpa 66 8e-154 541
WERAM-Sei-0026 Si006243m Setaria italica 68 1e-153 540
WERAM-Caa-0018 KGT69072 Candida albicans 64 1e-153 540
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 69 1e-153 540
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 64 3e-153 538
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 68 4e-153 538
WERAM-Zem-0056 GRMZM2G081474_P01 Zea mays 69 4e-153 538
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 66 5e-153 538
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 69 5e-153 538
WERAM-Kop-0004 CAY67954 Komagataella pastoris 64 5e-153 538
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 66 6e-153 538
WERAM-Sol-0082 Solyc06g071680.2.1 Solanum lycopersicum 66 6e-153 538
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 65 8e-153 537
WERAM-Chh-0102 ENSCHOP00000011659.1 Choloepus hoffmanni 75 1e-152 536
WERAM-Aet-0051 EMT16627 Aegilops tauschii 68 2e-152 536
WERAM-Asg-0034 AAS54885 Ashbya gossypii 63 3e-152 535
WERAM-Cag-0003 CAG57932 Candida glabrata 65 4e-152 535
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 66 8e-152 534
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 69 8e-152 534
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 68 1e-151 533
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 61 2e-151 533
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 66 1e-150 530
WERAM-Lem-0026 CBX91288 Leptosphaeria maculans 66 5e-150 528
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 65 6e-150 528
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 63 7e-150 527
WERAM-Pytr-0033 EDU43668 Pyrenophora triticirepentis 65 2e-149 526
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 63 4e-149 525
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 64 5e-149 525
WERAM-Miv-0036 MVLG_05319T0 Microbotryum violaceum 63 2e-148 523
WERAM-Usm-0008 UM01352P0 Ustilago maydis 62 5e-148 521
Created Date 25-Jun-2016