| Tag |
Content |
| WERAM ID |
WERAM-Gaa-0072 |
| Ensembl Protein ID |
ENSGACP00000009568.1 |
| Gene Name |
hdac1 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
7.40e-176 |
584.6 |
10 |
321 |
|
| Organism |
Gasterosteus aculeatus |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89
kkv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+kas ee++k+hs++yi+fl++++p+n++e+sk++++fnvg
ENSGACP00000009568.1 10 KKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVG 98
589************************************************************************************** PP
class-1.txt 90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
edcPvfdglfe+cql++G+s+++a kLnk+++diainwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea
ENSGACP00000009568.1 99 EDCPVFDGLFEFCQLSGGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187
***************************************************************************************** PP
class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+if++++ kv+e+++P+avvlqcGaDsl+gDrlg+f
ENSGACP00000009568.1 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFRPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCF 275
*****************.*********************************************************************** PP
class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
nl+ikgha+cv+++ksfnlpll+lGGGGYt+rnvaRcwtyetav+l
ENSGACP00000009568.1 276 NLTIKGHAKCVEYMKSFNLPLLMLGGGGYTIRNVARCWTYETAVAL 321
*******************************************987 PP
|
Protein Sequence
(Fasta) | MALTSQGTKK KVCYYYDGDV GNYYYGQGHP MKPHRIRMTH NLLLNYGLYR KMEIYRPHKA 60
SGEEMTKYHS DDYIKFLRSI RPDNMSEYSK QMQRFNVGED CPVFDGLFEF CQLSGGGSVA 120
GAVKLNKQQT DIAINWAGGL HHAKKSEASG FCYVNDIVLA ILELLKYHQR VLYIDIDIHH 180
GDGVEEAFYT TDRVMTVSFH KYGEYFPGTG DLRDIGAGKG KYYAVNYPLR DGIDDESYEA 240
IFRPIMAKVM EMYQPSAVVL QCGADSLSGD RLGCFNLTIK GHAKCVEYMK SFNLPLLMLG 300
GGGYTIRNVA RCWTYETAVA LDTSIPNELP YNDYFEYFGP DFKLHISPSN MTNQNTNDYL 360
EKIKQRLFEN LRMLPHAPGV QMQAIPEDAV QEDSGDEEEE DPNKRISIRA HDKRIACEEE 420
FSDSEDEGEG GRRNAASFKK VKRAKTEVKE EEKVPEEEKM DTSKPKEESK TP 472Protein Fasta Sequence
>ENSGACP00000009568.1|Class-I|Gasterosteus aculeatus
MALTSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSGGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFRPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLGGGGYTIRNVARCWTYETAVALDTSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEEEDPNKRISIRAHDKRIACEEEFSDSEDEGEGGRRNAASFKKVKRAKTEVKEEEKVPEEEKMDTSKPKEESKTP |
Nucleotide Sequence
(Fasta) | AAGCCAGCCA CACAAAAAAA AGCGCTAAAA TGGCGCTTAC TTCTCAAGGA ACAAAGAAGA 60
AAGTTTGCTA CTACTACGAC GGTGATGTTG GAAACTATTA CTACGGGCAG GGGCACCCCA 120
TGAAGCCCCA CCGGATCCGC ATGACTCACA ACCTGTTGCT CAACTATGGA CTCTACAGAA 180
AGATGGAGAT ATATCGTCCG CACAAAGCCA GCGGAGAAGA GATGACCAAG TATCACAGCG 240
ACGACTACAT CAAGTTCCTC CGTTCGATTA GACCGGACAA CATGTCGGAG TACAGCAAAC 300
AAATGCAGAG ATTTAACGTG GGAGAGGACT GTCCCGTGTT TGACGGTTTG TTTGAGTTCT 360
GCCAGCTCTC CGGAGGGGGC TCCGTCGCTG GTGCGGTGAA GTTGAACAAG CAGCAGACAG 420
ACATCGCCAT CAACTGGGCC GGAGGCCTGC ACCACGCCAA GAAGTCCGAG GCCTCTGGGT 480
TTTGCTACGT CAACGACATC GTACTCGCTA TTCTGGAGTT ACTGAAGTAC CACCAGAGAG 540
TTCTGTATAT AGATATTGAC ATCCATCACG GCGACGGTGT GGAGGAGGCC TTCTACACCA 600
CAGACCGTGT CATGACTGTG TCCTTCCACA AGTACGGGGA GTACTTCCCT GGCACCGGTG 660
ACCTGAGGGA TATCGGAGCC GGTAAGGGTA AATATTACGC TGTGAATTAC CCGCTGAGGG 720
ATGGCATCGA CGACGAGTCG TATGAAGCCA TCTTTAGACC TATCATGGCC AAGGTGATGG 780
AGATGTACCA ACCCAGCGCC GTGGTTCTGC AGTGTGGAGC CGATTCTCTG TCAGGGGACC 840
GGCTCGGTTG CTTTAACCTC ACCATCAAAG GCCATGCCAA GTGTGTGGAG TACATGAAGA 900
GTTTCAACCT GCCACTGCTG ATGCTGGGTG GAGGAGGCTA CACCATCCGT AATGTGGCAC 960
GCTGCTGGAC ATATGAGACT GCAGTGGCCC TCGACACCTC CATCCCCAAC GAGCTCCCAT 1020
ACAACGACTA CTTCGAGTAC TTCGGACCAG ACTTCAAGCT GCACATCAGC CCCTCCAACA 1080
TGACCAATCA GAACACAAAT GATTATCTGG AGAAGATCAA GCAGCGCTTG TTTGAGAACT 1140
TGCGGATGTT GCCACACGCC CCCGGGGTCC AAATGCAGGC CATCCCCGAG GACGCCGTGC 1200
AGGAGGACAG CGGTGACGAG GAGGAGGAGG ACCCCAACAA ACGCATCTCT ATCCGCGCTC 1260
ACGACAAAAG GATAGCGTGT GAGGAGGAGT TCTCTGACTC GGAGGATGAA GGCGAAGGAG 1320
GCCGCAGGAA CGCAGCCAGC TTCAAGAAAG TCAAACGAGC CAAAACAGAA GTAAAAGAAG 1380
AAGAGAAGGT GCCGGAGGAG GAGAAAATGG ACACTTCAAA GCCAAAAGAG GAGTCCAAGA 1440
CACCGTGAGG TCCTCAGCAG CCAATGACGC CATGGCAACT GATCGGGACA CATCTTAAAG 1500
CAAGATTGTT TTGAATCCTT CTCTCTGGGC TGCTGCTGTT GAAGTCAGTG AAGAACTGTA 1560
TCTTTGTAAT GAGACCCCCA CCCCCCCCCC CCCAAATGGG ATGGGGATCC AGATGTTTTC 1620
TAGGACACCT TTTCAACTGT ACCGGTTTTA TGGACTGAGG TTCAACGGAG TATTGTTGTT 1680
TTTTGTATGC TTTCTCGTTT TTTTATTATT AATCTTTTTG CTTATCCCCC GTGACGTAAC 1740
TCTGTAAAAA TGGCTTAGCA CACGTATGCT TTTATATATC TGATGGATTT AACTTATTTA 1800
AATCATAGAT ATTTTGGCTA CTTTGTTTTG TCTTTATGAC TTGTCATGTC TTTAAAAATG 1860
CAGTTGAAGC ATGTTAATGC AATAGATCCT TTTCTGTAAT ACATTTGTGT CACTGGTTTT 1920
GTCTGCTAAA GTCACCGAGT GGTCAAGAGG GTCGAGTGTA CCTGAACACC TTTTTAACAA 1980
GGCACAATAA ACTTGAAATT ACAGTTTTAT ATTTTAGGTT GTAATTTACT ATGTGTCCTT 2040
TAAACATTTG ACAGCTTTGT CTTTTTGGGA TTCCTGCCGC AAAATACAGT TTGGATCCCA 2100
TAATTGCTGC CGTCAGAGCT AATTTGGACT TAAATATCCA GAGTGTATTA ATCTAAAATG 2160
GGAGACAAAT GCCAGAATGC ATTTGTTGTG TATATATTTG TATTCTCAAA AGTGTTGTTT 2220
AAATCTGACA GATCCCAGTG TGCGT
2246Nucleotide Fasta Sequence
>ENSGACP00000009568.1|Class-I|Gasterosteus aculeatus
AAGCCAGCCACACAAAAAAAAGCGCTAAAATGGCGCTTACTTCTCAAGGAACAAAGAAGAAAGTTTGCTACTACTACGACGGTGATGTTGGAAACTATTACTACGGGCAGGGGCACCCCATGAAGCCCCACCGGATCCGCATGACTCACAACCTGTTGCTCAACTATGGACTCTACAGAAAGATGGAGATATATCGTCCGCACAAAGCCAGCGGAGAAGAGATGACCAAGTATCACAGCGACGACTACATCAAGTTCCTCCGTTCGATTAGACCGGACAACATGTCGGAGTACAGCAAACAAATGCAGAGATTTAACGTGGGAGAGGACTGTCCCGTGTTTGACGGTTTGTTTGAGTTCTGCCAGCTCTCCGGAGGGGGCTCCGTCGCTGGTGCGGTGAAGTTGAACAAGCAGCAGACAGACATCGCCATCAACTGGGCCGGAGGCCTGCACCACGCCAAGAAGTCCGAGGCCTCTGGGTTTTGCTACGTCAACGACATCGTACTCGCTATTCTGGAGTTACTGAAGTACCACCAGAGAGTTCTGTATATAGATATTGACATCCATCACGGCGACGGTGTGGAGGAGGCCTTCTACACCACAGACCGTGTCATGACTGTGTCCTTCCACAAGTACGGGGAGTACTTCCCTGGCACCGGTGACCTGAGGGATATCGGAGCCGGTAAGGGTAAATATTACGCTGTGAATTACCCGCTGAGGGATGGCATCGACGACGAGTCGTATGAAGCCATCTTTAGACCTATCATGGCCAAGGTGATGGAGATGTACCAACCCAGCGCCGTGGTTCTGCAGTGTGGAGCCGATTCTCTGTCAGGGGACCGGCTCGGTTGCTTTAACCTCACCATCAAAGGCCATGCCAAGTGTGTGGAGTACATGAAGAGTTTCAACCTGCCACTGCTGATGCTGGGTGGAGGAGGCTACACCATCCGTAATGTGGCACGCTGCTGGACATATGAGACTGCAGTGGCCCTCGACACCTCCATCCCCAACGAGCTCCCATACAACGACTACTTCGAGTACTTCGGACCAGACTTCAAGCTGCACATCAGCCCCTCCAACATGACCAATCAGAACACAAATGATTATCTGGAGAAGATCAAGCAGCGCTTGTTTGAGAACTTGCGGATGTTGCCACACGCCCCCGGGGTCCAAATGCAGGCCATCCCCGAGGACGCCGTGCAGGAGGACAGCGGTGACGAGGAGGAGGAGGACCCCAACAAACGCATCTCTATCCGCGCTCACGACAAAAGGATAGCGTGTGAGGAGGAGTTCTCTGACTCGGAGGATGAAGGCGAAGGAGGCCGCAGGAACGCAGCCAGCTTCAAGAAAGTCAAACGAGCCAAAACAGAAGTAAAAGAAGAAGAGAAGGTGCCGGAGGAGGAGAAAATGGACACTTCAAAGCCAAAAGAGGAGTCCAAGACACCGTGAGGTCCTCAGCAGCCAATGACGCCATGGCAACTGATCGGGACACATCTTAAAGCAAGATTGTTTTGAATCCTTCTCTCTGGGCTGCTGCTGTTGAAGTCAGTGAAGAACTGTATCTTTGTAATGAGACCCCCACCCCCCCCCCCCCAAATGGGATGGGGATCCAGATGTTTTCTAGGACACCTTTTCAACTGTACCGGTTTTATGGACTGAGGTTCAACGGAGTATTGTTGTTTTTTGTATGCTTTCTCGTTTTTTTATTATTAATCTTTTTGCTTATCCCCCGTGACGTAACTCTGTAAAAATGGCTTAGCACACGTATGCTTTTATATATCTGATGGATTTAACTTATTTAAATCATAGATATTTTGGCTACTTTGTTTTGTCTTTATGACTTGTCATGTCTTTAAAAATGCAGTTGAAGCATGTTAATGCAATAGATCCTTTTCTGTAATACATTTGTGTCACTGGTTTTGTCTGCTAAAGTCACCGAGTGGTCAAGAGGGTCGAGTGTACCTGAACACCTTTTTAACAAGGCACAATAAACTTGAAATTACAGTTTTATATTTTAGGTTGTAATTTACTATGTGTCCTTTAAACATTTGACAGCTTTGTCTTTTTGGGATTCCTGCCGCAAAATACAGTTTGGATCCCATAATTGCTGCCGTCAGAGCTAATTTGGACTTAAATATCCAGAGTGTATTAATCTAAAATGGGAGACAAATGCCAGAATGCATTTGTTGTGTATATATTTGTATTCTCAAAAGTGTTGTTTAAATCTGACAGATCCCAGTGTGCGT
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
