| Tag |
Content |
| WERAM ID |
WERAM-Bro-0169 |
| Ensembl Protein ID |
Bo9g017510.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
6.70e-163 |
543.2 |
19 |
332 |
|
| Organism |
Brassica oleracea |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeels..kelkkfnvgedcPvf 95
++v+y+y++++g+y+ygq+hpmkp+r++++h+L+++y+l+++lei +p+ a+a+++ +fhs +y++fl++v+pe++ ++s ++l++fnvgedcPvf
Bo9g017510.1 19 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIVHYNLHRRLEISRPNLADASDIGQFHSPDYVDFLRSVSPESMGDHSaaRNLRRFNVGEDCPVF 115
589*************************************************************************97765589************* PP
class-1.txt 96 dglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhk 192
dglf++c++++G+s+ aa kLn+++adiainw GGlhhakkseasGfcyvnDivl+ilellk+++rvly+did+hhGDgveeafyttdrvmtvsfhk
Bo9g017510.1 116 DGLFDFCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHK 212
************************************************************************************************* PP
class-1.txt 193 ygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpll 289
+g+ ffPgtG+++d+gaekgkyya+nvPl+dg+dDes++++f+++i+kv+++++PeavvlqcGaDsl+gDrlg+fnls+kgha+c++f++s+n+pl+
Bo9g017510.1 213 FGD-FFPGTGHIRDIGAEKGKYYALNVPLNDGMDDESFRSMFRPLIQKVMDVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVPLM 308
***.********************************************************************************************* PP
class-1.txt 290 vlGGGGYtlrnvaRcwtyetavvl 313
vlGGGGYt+rnvaRcw+yetav++
Bo9g017510.1 309 VLGGGGYTIRNVARCWCYETAVAV 332
*********************986 PP
|
Protein Sequence
(Fasta) | METDESGVSL PSGPDGRKRR VSYFYEPTIG DYYYGQGHPM KPHRIRMAHS LIVHYNLHRR 60
LEISRPNLAD ASDIGQFHSP DYVDFLRSVS PESMGDHSAA RNLRRFNVGE DCPVFDGLFD 120
FCRASAGGSI GAAVKLNRQD ADIAINWGGG LHHAKKSEAS GFCYVNDIVL GILELLKMFR 180
RVLYVDIDVH HGDGVEEAFY TTDRVMTVSF HKFGDFFPGT GHIRDIGAEK GKYYALNVPL 240
NDGMDDESFR SMFRPLIQKV MDVYQPEAVV LQCGADSLSG DRLGCFNLSV KGHADCLRFL 300
RSYNVPLMVL GGGGYTIRNV ARCWCYETAV AVGVEPDNKL PYNEYFEYFG PDYTLHVDPG 360
PMENLNTPKD MEKIRNTLLE QLSGLIHAPS VQFQHTPPVN RVLDEPEEDL EERPKPRIWS 420
GTANYESDSD DDEKSPPLVG FSGINDPPMD RDSTGEDDME DEPEVNPPSS Protein Fasta Sequence
>Bo9g017510.1|Class-I|Brassica oleracea
METDESGVSLPSGPDGRKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIVHYNLHRRLEISRPNLADASDIGQFHSPDYVDFLRSVSPESMGDHSAARNLRRFNVGEDCPVFDGLFDFCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDIGAEKGKYYALNVPLNDGMDDESFRSMFRPLIQKVMDVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVDPGPMENLNTPKDMEKIRNTLLEQLSGLIHAPSVQFQHTPPVNRVLDEPEEDLEERPKPRIWSGTANYESDSDDDEKSPPLVGFSGINDPPMDRDSTGEDDMEDEPEVNPPSS |
Nucleotide Sequence
(Fasta) | ATGGAGACAG ACGAGAGCGG CGTATCATTG CCGTCAGGTC CCGACGGACG CAAGCGTCGA 60
GTCAGCTACT TCTACGAGCC GACGATCGGC GACTACTACT ACGGCCAAGG ACACCCGATG 120
AAGCCTCACC GGATCCGTAT GGCTCACAGC CTCATCGTAC ACTACAACCT CCACCGTCGC 180
CTCGAGATCA GCCGCCCTAA CCTCGCCGAC GCCTCCGACA TCGGCCAGTT CCATTCCCCG 240
GACTACGTCG ATTTCCTCCG CTCCGTTTCG CCGGAGTCCA TGGGCGATCA CTCTGCCGCG 300
CGGAACCTGA GGCGATTCAA CGTCGGCGAG GATTGTCCTG TCTTCGACGG GCTTTTCGAC 360
TTCTGCCGCG CTTCCGCCGG AGGCTCGATT GGAGCTGCGG TTAAGTTGAA CCGGCAGGAC 420
GCGGATATTG CGATCAATTG GGGCGGTGGG CTTCACCATG CTAAGAAGAG TGAAGCCTCT 480
GGGTTTTGCT ATGTGAACGA CATCGTTTTG GGGATTCTCG AGTTGCTCAA GATGTTTAGG 540
CGAGTTCTCT ACGTTGATAT CGATGTGCAC CATGGAGATG GAGTAGAAGA AGCGTTTTAC 600
ACCACCGATA GAGTTATGAC TGTTTCGTTT CACAAGTTCG GAGACTTTTT CCCAGGAACT 660
GGTCACATCA GAGACATTGG CGCCGAGAAA GGGAAATACT ACGCTCTAAA TGTTCCACTA 720
AACGATGGTA TGGACGATGA GAGTTTCCGC AGCATGTTTA GACCTCTTAT CCAGAAGGTT 780
ATGGATGTGT ATCAGCCAGA GGCGGTTGTT CTTCAGTGTG GAGCTGACTC CTTAAGCGGT 840
GATCGGTTGG GTTGCTTCAA CTTATCAGTC AAGGGTCATG CTGATTGCCT CCGGTTCTTG 900
AGATCTTACA ACGTCCCTCT CATGGTCTTG GGTGGTGGAG GGTATACTAT TCGAAATGTT 960
GCCCGTTGCT GGTGTTATGA GACTGCAGTT GCGGTTGGAG TAGAGCCGGA CAACAAGCTC 1020
CCGTACAATG AGTACTTTGA GTATTTCGGT CCAGACTATA CGCTTCACGT CGATCCAGGC 1080
CCAATGGAGA ATTTGAACAC ACCAAAAGAT ATGGAGAAGA TAAGGAACAC ATTGCTAGAA 1140
CAACTTTCAG GACTAATACA CGCACCTAGC GTGCAGTTTC AGCACACACC TCCAGTGAAT 1200
AGAGTTTTGG ATGAGCCGGA AGAAGACTTG GAGGAAAGAC CAAAGCCTCG GATTTGGAGT 1260
GGAACGGCGA ATTATGAATC AGACAGTGAC GATGATGAGA AATCACCACC TCTTGTTGGT 1320
TTCTCGGGTA TTAATGACCC ACCTATGGAC AGGGACTCTA CTGGTGAAGA TGATATGGAA 1380
GATGAGCCTG AAGTGAATCC ACCATCCTCT TAA
1414Nucleotide Fasta Sequence
>Bo9g017510.1|Class-I|Brassica oleracea
ATGGAGACAGACGAGAGCGGCGTATCATTGCCGTCAGGTCCCGACGGACGCAAGCGTCGAGTCAGCTACTTCTACGAGCCGACGATCGGCGACTACTACTACGGCCAAGGACACCCGATGAAGCCTCACCGGATCCGTATGGCTCACAGCCTCATCGTACACTACAACCTCCACCGTCGCCTCGAGATCAGCCGCCCTAACCTCGCCGACGCCTCCGACATCGGCCAGTTCCATTCCCCGGACTACGTCGATTTCCTCCGCTCCGTTTCGCCGGAGTCCATGGGCGATCACTCTGCCGCGCGGAACCTGAGGCGATTCAACGTCGGCGAGGATTGTCCTGTCTTCGACGGGCTTTTCGACTTCTGCCGCGCTTCCGCCGGAGGCTCGATTGGAGCTGCGGTTAAGTTGAACCGGCAGGACGCGGATATTGCGATCAATTGGGGCGGTGGGCTTCACCATGCTAAGAAGAGTGAAGCCTCTGGGTTTTGCTATGTGAACGACATCGTTTTGGGGATTCTCGAGTTGCTCAAGATGTTTAGGCGAGTTCTCTACGTTGATATCGATGTGCACCATGGAGATGGAGTAGAAGAAGCGTTTTACACCACCGATAGAGTTATGACTGTTTCGTTTCACAAGTTCGGAGACTTTTTCCCAGGAACTGGTCACATCAGAGACATTGGCGCCGAGAAAGGGAAATACTACGCTCTAAATGTTCCACTAAACGATGGTATGGACGATGAGAGTTTCCGCAGCATGTTTAGACCTCTTATCCAGAAGGTTATGGATGTGTATCAGCCAGAGGCGGTTGTTCTTCAGTGTGGAGCTGACTCCTTAAGCGGTGATCGGTTGGGTTGCTTCAACTTATCAGTCAAGGGTCATGCTGATTGCCTCCGGTTCTTGAGATCTTACAACGTCCCTCTCATGGTCTTGGGTGGTGGAGGGTATACTATTCGAAATGTTGCCCGTTGCTGGTGTTATGAGACTGCAGTTGCGGTTGGAGTAGAGCCGGACAACAAGCTCCCGTACAATGAGTACTTTGAGTATTTCGGTCCAGACTATACGCTTCACGTCGATCCAGGCCCAATGGAGAATTTGAACACACCAAAAGATATGGAGAAGATAAGGAACACATTGCTAGAACAACTTTCAGGACTAATACACGCACCTAGCGTGCAGTTTCAGCACACACCTCCAGTGAATAGAGTTTTGGATGAGCCGGAAGAAGACTTGGAGGAAAGACCAAAGCCTCGGATTTGGAGTGGAACGGCGAATTATGAATCAGACAGTGACGATGATGAGAAATCACCACCTCTTGTTGGTTTCTCGGGTATTAATGACCCACCTATGGACAGGGACTCTACTGGTGAAGATGATATGGAAGATGAGCCTGAAGTGAATCCACCATCCTCTTAA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
