WERAM Information


Tag Content
WERAM ID WERAM-Orb-0066
Ensembl Protein ID OBART06G19560.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OBART06G19560 OBART06G19560.1 OBART06G19560.1
OBART06G19560 OBART06G19560.2 OBART06G19560.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 4.10e-164 546.6 22 332
Organism Oryza barthii
Domain Profile
  HDAC Class-I

      class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPv 94 
++v+y+yd +vg+y+ygq+hpmkp+r+++th L+ +ygl +++++kp+ a+ ++l++fh+++y+ fl++v+pe++++ ++ lk+fnvgedcPv
OBART06G19560.1 22 RRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDQMQVLKPHPARDRDLCRFHADDYVAFLRSVTPETQQDQIRALKRFNVGEDCPV 115
589******************************************************************************************* PP
class-1.txt 95 fdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtv 188
fdgl+++cq+++G+s+ +a kLn++ diainwaGGlhhakk+easGfcyvnDivlailellk+h+rvly+did+hhGDgveeafyttdrvmtv
OBART06G19560.1 116 FDGLYSFCQTYAGGSVGGAVKLNHG-HDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTV 208
**********************997.59****************************************************************** PP
class-1.txt 189 sfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvk 282
sfhk+g+ +fPgtGd++d+g+ kgkyy++nvPl+dgidDesy+++fk+++ kv+e+f+P avvlqcGaDsl+gDrlg+fnlsi+ghaecv+f++
OBART06G19560.1 209 SFHKFGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRFMR 301
*******.************************************************************************************** PP
class-1.txt 283 sfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
sfn+pll+lGGGGYt+rnvaRcw+yet+v+l
OBART06G19560.1 302 SFNVPLLLLGGGGYTIRNVARCWCYETGVAL 332
****************************986 PP

Protein Sequence
(Fasta)
MDASAGGGGN SLPTAGADGA KRRVCYFYDA EVGNYYYGQG HPMKPHRIRM THALLAHYGL 60
LDQMQVLKPH PARDRDLCRF HADDYVAFLR SVTPETQQDQ IRALKRFNVG EDCPVFDGLY 120
SFCQTYAGGS VGGAVKLNHG HDIAINWAGG LHHAKKCEAS GFCYVNDIVL AILELLKYHQ 180
RVLYVDIDIH HGDGVEEAFY TTDRVMTVSF HKFGDYFPGT GDIRDIGHSK GKYYSLNVPL 240
DDGIDDESYQ SLFKPIMGKV MEVFRPGAVV LQCGADSLSG DRLGCFNLSI RGHAECVRFM 300
RSFNVPLLLL GGGGYTIRNV ARCWCYETGV ALGHELTDKM PPNEYFEYFG PDYTLHVAPS 360
NMENKNTRQQ LDDIRSRLLD NLSKLRHAPS VQFQERPPEA ELPEQDEDQE DPDERHHADS 420
DVEMDAVKPL DDSGRRSSIQ NVRVKRESAE TDAADQDGNR VTAEHTKGTE PAADGVGSSK 480
QTVPTDASAM AIDEPGSLKV EPDNSNKLQD QASVHQKP 518
Nucleotide Sequence
(Fasta)
ATGGACGCCT CCGCCGGAGG CGGGGGGAAC TCGCTGCCGA CGGCGGGGGC CGACGGGGCC 60
AAGCGGCGTG TGTGCTACTT CTACGACGCG GAGGTGGGGA ACTACTACTA CGGGCAGGGG 120
CACCCGATGA AGCCCCACCG CATCCGGATG ACCCACGCGC TGCTCGCCCA CTACGGCCTC 180
CTCGACCAGA TGCAGGTGCT CAAGCCCCAC CCGGCGCGCG ACCGCGACCT CTGCCGCTTC 240
CACGCCGACG ACTACGTCGC CTTCCTCCGC TCCGTCACGC CGGAGACCCA GCAGGACCAG 300
ATCCGGGCGC TCAAGCGCTT CAACGTCGGC GAGGACTGCC CCGTCTTCGA CGGCCTCTAC 360
AGCTTCTGCC AGACCTACGC CGGGGGATCC GTCGGCGGCG CCGTCAAGCT CAACCACGGC 420
CACGACATCG CCATCAACTG GGCCGGCGGC CTCCACCACG CCAAGAAGTG CGAGGCCTCG 480
GGATTCTGCT ACGTCAACGA CATCGTCCTC GCCATCCTCG AGCTCCTCAA ATACCACCAG 540
CGTGTTCTCT ATGTGGATAT CGATATTCAC CATGGGGATG GTGTGGAGGA GGCGTTCTAC 600
ACGACGGACA GGGTGATGAC GGTCTCGTTC CACAAGTTTG GGGATTATTT CCCGGGGACC 660
GGGGACATTC GCGATATTGG GCACTCAAAG GGGAAGTATT ACTCTCTGAA TGTGCCGTTG 720
GACGATGGTA TTGACGACGA GAGCTACCAG TCGTTGTTCA AGCCGATCAT GGGGAAGGTG 780
ATGGAGGTTT TTCGCCCTGG CGCGGTGGTG CTCCAGTGCG GTGCGGACTC TCTGTCGGGT 840
GATAGGTTGG GTTGCTTCAA CCTGTCGATC AGGGGCCATG CGGAATGTGT GAGATTCATG 900
AGGTCCTTCA ACGTCCCGCT GTTGCTGCTT GGTGGTGGTG GGTATACCAT AAGAAATGTT 960
GCACGGTGTT GGTGCTATGA GACAGGAGTT GCACTTGGTC ATGAGCTCAC TGACAAGATG 1020
CCTCCAAATG AGTATTTTGA GTACTTTGGT CCAGATTATA CACTTCATGT TGCACCAAGT 1080
AACATGGAGA ACAAAAACAC ACGCCAGCAA TTGGATGATA TAAGATCAAG ACTTCTTGAT 1140
AATCTTTCAA AACTTCGACA TGCTCCTAGC GTCCAATTTC AAGAGCGACC CCCTGAGGCT 1200
GAGCTACCTG AGCAAGATGA AGACCAAGAG GATCCTGATG AAAGGCACCA TGCTGATTCT 1260
GATGTGGAAA TGGATGCTGT CAAACCTTTG GATGACTCAG GAAGGAGGAG CAGTATTCAG 1320
AATGTGAGAG TTAAGAGAGA ATCTGCTGAA ACAGATGCCG CAGATCAGGA TGGTAATAGG 1380
GTCACTGCAG AGCACACCAA GGGCACAGAA CCTGCGGCTG ATGGAGTTGG TTCCTCGAAA 1440
CAAACTGTTC CTACCGATGC AAGTGCGATG GCCATAGACG AACCAGGCTC CCTGAAAGTC 1500
GAGCCAGATA ACTCAAACAA ATTGCAAGAT CAAGCATCGG TGCACCAGAA GCCATAA 1558
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 99 0.0 1006
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 98 0.0 1001
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 97 0.0 996
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 98 0.0 996
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 97 0.0 993
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 91 0.0 951
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 97 0.0 936
WERAM-Sei-0026 Si006243m Setaria italica 91 0.0 934
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 91 0.0 932
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 97 0.0 899
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 100 0.0 897
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 92 0.0 890
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 93 0.0 861
WERAM-Aet-0051 EMT16627 Aegilops tauschii 84 0.0 851
WERAM-Zem-0099 GRMZM2G172883_P01 Zea mays 84 0.0 850
WERAM-Thc-0026 EOX98961 Theobroma cacao 80 0.0 764
WERAM-Viv-0012 VIT_03s0038g04240.t01 Vitis vinifera 79 0.0 761
WERAM-Pot-0112 POPTR_0009s17200.1 Populus trichocarpa 76 0.0 753
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 78 0.0 751
WERAM-Arl-0038 fgenesh1_pm.C_scaffold_7000002 Arabidopsis lyrata 76 0.0 733
WERAM-Art-0112 AT4G38130.1 Arabidopsis thaliana 75 0.0 733
WERAM-Hov-0099 MLOC_71091.1 Hordeum vulgare 92 0.0 732
WERAM-Glm-0012 GLYMA01G45660.3 Glycine max 77 0.0 729
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 72 0.0 728
WERAM-Prp-0056 EMJ02177 Prunus persica 77 0.0 727
WERAM-Bro-0021 Bo1g151980.1 Brassica oleracea 77 0.0 727
WERAM-Brr-0202 Bra040131.1-P Brassica rapa 74 0.0 725
WERAM-Met-0084 KEH36404 Medicago truncatula 76 0.0 725
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 85 0.0 724
WERAM-Amt-0016 ERM94967 Amborella trichopoda 74 0.0 712
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 84 0.0 689
WERAM-Mua-0048 GSMUA_Achr2P19590_001 Musa acuminata 69 0.0 683
WERAM-Tru-0006 TRIUR3_03674-P1 Triticum urartu 80 0.0 647
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 70 4e-172 602
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 70 4e-172 601
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 70 7e-172 601
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 70 7e-172 601
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 70 8e-172 600
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 70 1e-171 600
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 70 1e-171 600
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 70 1e-171 600
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 70 1e-171 600
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 70 1e-171 600
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 70 1e-171 600
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 70 2e-171 600
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 70 2e-171 600
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 72 2e-171 599
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 69 4e-171 598
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 69 5e-171 598
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 69 7e-171 597
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 69 7e-171 597
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 69 1e-170 597
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 69 3e-170 595
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 69 4e-170 595
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 69 6e-170 594
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 69 6e-168 588
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 69 9e-168 587
WERAM-Pof-0181 ENSPFOP00000015600.1 Poecilia formosa 62 2e-167 586
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 61 1e-166 583
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 67 1e-166 583
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 69 2e-166 582
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 69 5e-166 581
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 71 5e-166 581
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 69 7e-166 581
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 60 9e-166 580
WERAM-Orn-0136 ENSONIP00000014285.1 Oreochromis niloticus 70 1e-165 580
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 70 1e-165 580
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 70 1e-165 580
WERAM-Xim-0061 ENSXMAP00000005239.1 Xiphophorus maculatus 57 2e-165 580
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 70 2e-165 579
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 70 3e-165 579
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 67 4e-165 578
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 70 6e-165 578
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 70 8e-165 577
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 70 1e-164 577
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 70 1e-164 577
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 70 1e-164 577
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 69 2e-164 576
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 70 2e-163 572
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 61 6e-163 571
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 61 7e-163 571
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 61 8e-163 570
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 61 9e-163 570
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 61 9e-163 570
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 70 6e-158 554
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 57 4e-157 552
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 61 4e-157 551
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 63 6e-155 544
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 60 3e-154 542
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 63 8e-154 541
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 62 1e-153 540
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 64 2e-153 540
WERAM-Coi-0024 EAS33504 Coccidioides immitis 61 2e-153 539
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 63 3e-153 539
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 67 4e-153 538
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 65 8e-153 537
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 60 1e-150 530
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 60 1e-149 527
WERAM-Trv-0003 EHK19072 Trichoderma virens 62 2e-149 526
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 70 4e-149 525
WERAM-Cym-0014 CMJ129CT Cyanidioschyzon merolae 63 4e-149 525
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 60 4e-149 525
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 60 7e-149 524
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 63 8e-149 524
WERAM-Cag-0003 CAG57932 Candida glabrata 62 1e-148 524
WERAM-Caa-0018 KGT69072 Candida albicans 52 1e-148 523
WERAM-Ved-0020 EGY15146 Verticillium dahliae 60 2e-148 523
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 61 2e-148 523
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 61 3e-148 522
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 63 4e-148 521
WERAM-Scp-0033 SPBC36.05c.1:pep Schizosaccharomyces pombe 63 1e-147 520
WERAM-Mam-0073 ENSMMUP00000011716.2 Macaca mulatta 58 1e-147 520
Created Date 25-Jun-2016