WERAM Information

Tag Content
WERAM ID WERAM-Sol-0082
Ensembl Protein ID Solyc06g071680.2.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc06g071680.2 Solyc06g071680.2.1 Solyc06g071680.2.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 8.70e-161 535.4 22 335
Organism Solanum lycopersicum
Domain Profile
  HDAC Class-I
         class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae..elskelkkfnvg 89 
                         ++v+y+y++++g+y+ygq+hpmkp+r++++h+L++ny l++++ei +p  a  +++ +fhs +y++fl +v+pe+ +  ++s++lk+fnvg
  Solyc06g071680.2.1  22 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVNYYLHRRMEISRPFPAGEDDIRRFHSPDYVDFLATVSPETLHdhTHSRHLKRFNVG 112
                         589************************************************************************983345589******* PP
         class-1.txt  90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafy 180
                         edcPvfdglf +cq+++G+s+ aa kLn+++adi+inwaGGlhhakkseasGfcyvnDivl+ilellk hkrvlyidid+hhGDgveeaf 
  Solyc06g071680.2.1 113 EDCPVFDGLFGFCQASAGGSIGAAVKLNRQDADITINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHKRVLYIDIDIHHGDGVEEAFF 203
                         ******************************************************************************************* PP
         class-1.txt 181 ttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsi 271
                         ttdrvmtvsfhk+g+ ffPgtG+++d+ga++gkyya+nvPl+dg+dD+s+ ++f++ i+kv+e+++PeavvlqcGaDslagDrlg+fnls+
  Solyc06g071680.2.1 204 TTDRVMTVSFHKFGD-FFPGTGHIKDIGANQGKYYALNVPLHDGMDDDSFGRLFRPTIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSV 293
                         ***************.*************************************************************************** PP
         class-1.txt 272 kghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                         kgha c+++++sfn+pl+vlGGGGYt+rnvaRcw+yetav++
  Solyc06g071680.2.1 294 KGHAACLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAV 335
                         ***************************************986 PP
Protein Sequence
(Fasta)		MDSSTVDGGA SLPSTGTDAR KRRVSYFYEP TIGDYYYGQG HPMKPHRIRM AHNLIVNYYL 60
HRRMEISRPF PAGEDDIRRF HSPDYVDFLA TVSPETLHDH THSRHLKRFN VGEDCPVFDG 120
LFGFCQASAG GSIGAAVKLN RQDADITINW AGGLHHAKKS EASGFCYVND IVLGILELLK 180
VHKRVLYIDI DIHHGDGVEE AFFTTDRVMT VSFHKFGDFF PGTGHIKDIG ANQGKYYALN 240
VPLHDGMDDD SFGRLFRPTI QKVMEVYQPE AVVLQCGADS LAGDRLGCFN LSVKGHAACL 300
RYLRSFNVPL MVLGGGGYTI RNVARCWCYE TAVAVGVEPE NKLPYNEYYE YFGPDYTLHV 360
EPIPMENLNS PRDLEKMRNI LLEQISQLPH APSVPFQTTP STTEVPEEKE ENMDRRPKPR 420
IWNGDGYESD ADEDEKPRQR SSDSNLTPVE SSDMRDVDDQ ANADDMVDDH P 471
Nucleotide Sequence
(Fasta)		CCTGGACTCA ATACAGACTG CCGAGTCTCT CGCAAAAATC CCAAATTTCA TTTTCACTCT 60
CACTCCGAAC CCAAAAATCA GTGGCTAATG GACTCCTCCA CCGTAGACGG CGGCGCATCG 120
CTTCCATCAA CCGGAACCGA CGCTAGGAAG CGTCGTGTCT CTTACTTCTA TGAGCCAACC 180
ATCGGCGATT ATTACTACGG CCAAGGTCAT CCGATGAAGC CGCACCGTAT CAGAATGGCC 240
CACAATCTCA TCGTAAACTA CTACCTACAC AGGCGTATGG AAATCAGTCG TCCTTTTCCG 300
GCGGGAGAGG ATGATATCCG ACGTTTTCAC TCGCCGGATT ATGTTGACTT CCTTGCTACC 360
GTTTCACCGG AGACTCTTCA TGACCATACA CATTCACGTC ATCTCAAACG GTTTAATGTT 420
GGTGAGGATT GTCCTGTTTT CGATGGGCTT TTTGGGTTTT GTCAAGCTTC TGCTGGTGGA 480
TCTATTGGGG CTGCGGTTAA GCTTAATCGG CAGGATGCTG ATATAACGAT CAACTGGGCT 540
GGTGGTCTGC ACCATGCAAA GAAAAGTGAA GCTTCTGGTT TTTGCTATGT GAATGATATT 600
GTTCTTGGTA TTCTTGAGCT CCTCAAAGTC CACAAGCGTG TATTGTACAT AGACATTGAT 660
ATTCACCATG GTGATGGTGT TGAGGAGGCT TTTTTCACCA CAGATAGAGT CATGACAGTA 720
TCTTTTCATA AGTTTGGGGA TTTCTTTCCT GGTACGGGGC ACATCAAAGA CATTGGTGCA 780
AATCAGGGGA AGTACTATGC CCTAAATGTC CCATTGCATG ATGGGATGGA TGACGATAGT 840
TTTGGTAGAC TATTTCGTCC CACAATACAA AAAGTCATGG AGGTCTACCA ACCTGAGGCT 900
GTTGTTCTTC AATGTGGGGC TGATTCACTG GCTGGAGACA GGTTGGGTTG CTTCAACTTG 960
TCTGTCAAGG GCCATGCCGC TTGCCTTAGG TACCTCAGAT CCTTCAATGT CCCTCTGATG 1020
GTATTGGGTG GTGGAGGTTA TACTATAAGA AATGTCGCTA GGTGCTGGTG CTATGAGACA 1080
GCAGTTGCAG TTGGGGTAGA ACCTGAAAAC AAGTTGCCTT ACAACGAGTA TTATGAATAT 1140
TTTGGCCCAG ATTATACTCT TCATGTTGAA CCAATTCCCA TGGAGAATCT AAATTCACCT 1200
AGGGATCTGG AGAAGATGAG GAACATATTG CTTGAGCAAA TCTCTCAGTT GCCTCATGCA 1260
CCTAGTGTGC CATTTCAGAC CACTCCTTCT ACAACAGAAG TCCCAGAGGA GAAAGAGGAA 1320
AATATGGATC GAAGGCCTAA ACCACGGATA TGGAATGGTG ATGGTTATGA GTCTGATGCT 1380
GATGAAGACG AGAAACCTAG ACAGCGAAGT TCAGATAGTA ATCTTACTCC AGTGGAATCA 1440
TCTGACATGA GGGATGTGGA CGACCAAGCC AATGCAGATG ACATGGTTGA TGATCATCCC 1500
TAGTTCAAAG CTCTTCTACA TCGTCTCAAA ATGCAATGAC TGATACTATT TTTGGGTCGG 1560
AAGTAACAAG CCTTGCTATT TGACCTTTCG CCTCTCATGA GCAATTGTTT TGATGTCTCT 1620
TTTGCTGAAA ATGGAACTAG AAAAATGAGT TGTTATAGTA GATTGTAGTT AGTTGGATAT 1680
AGGCTAGTGA TTGATGAATG AGAGCACAAT GCTGTCTCTC GTAAATGGAC CGGTGCACCA 1740
CAAAGTAGAC TTTGTTCTTA TGGATACTGC TTATTACATA CAAATATTAT CAGTGTTCTG 1800
CAAGAGTTAT CTGT 1815
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 85 0.0 800
WERAM-Thc-0029 EOY20838 Theobroma cacao 83 0.0 783
WERAM-Pot-0149 POPTR_0015s09400.1 Populus trichocarpa 83 0.0 781
WERAM-Sot-0084 PGSC0003DMT400069418 Solanum tuberosum 99 0.0 780
WERAM-Glm-0046 GLYMA05G02540.1 Glycine max 83 0.0 778
WERAM-Met-0068 AES71453 Medicago truncatula 82 0.0 759
WERAM-Prp-0060 EMJ10303 Prunus persica 84 0.0 756
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 82 0.0 741
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 81 0.0 738
WERAM-Bro-0056 Bo3g104750.1 Brassica oleracea 80 0.0 734
WERAM-Brr-0193 Bra038607.1-P Brassica rapa 80 0.0 728
WERAM-Amt-0082 ERN02510 Amborella trichopoda 76 0.0 689
WERAM-Orbr-0098 OB08G20020.1 Oryza brachyantha 72 0.0 686
WERAM-Zem-0077 GRMZM2G136067_P01 Zea mays 73 0.0 682
WERAM-Orr-0094 ORUFI08G12880.1 Oryza rufipogon 72 0.0 682
WERAM-Sob-0102 Sb07g018230.1 Sorghum bicolor 73 0.0 682
WERAM-Ors-0081 OS08T0344100-01 Oryza sativa 72 0.0 681
WERAM-Orp-0087 OPUNC08G10650.1 Oryza punctata 72 0.0 681
WERAM-Orm-0085 OMERI08G09730.1 Oryza meridionalis 72 0.0 681
WERAM-Ori-0098 BGIOSGA028498-PA Oryza indica 72 0.0 681
WERAM-Orgl-0088 OGLUM08G12440.1 Oryza glumaepatula 72 0.0 681
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 72 0.0 681
WERAM-Tra-0274 Traes_6DS_08E9A4EDB.1 Triticum aestivum 73 0.0 680
WERAM-Sei-0051 Si013709m Setaria italica 73 0.0 677
WERAM-Brd-0077 BRADI3G22370.1 Brachypodium distachyon 73 0.0 676
WERAM-Hov-0020 MLOC_17056.1 Hordeum vulgare 73 0.0 676
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 69 0.0 642
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 63 1e-173 607
WERAM-Mua-0044 GSMUA_Achr2P06520_001 Musa acuminata 76 4e-173 605
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 68 3e-166 582
WERAM-Orni-0044 ONIVA04G29040.1 Oryza nivara 63 2e-165 579
WERAM-Aet-0051 EMT16627 Aegilops tauschii 69 3e-164 575
WERAM-Lep-0023 LPERR02G07360.1 Leersia perrieri 66 2e-162 570
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 65 2e-162 569
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 65 3e-162 568
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 65 4e-162 568
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 65 5e-162 568
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 65 5e-162 568
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 66 5e-162 568
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 65 6e-162 568
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 65 7e-162 567
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 65 8e-162 567
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 65 8e-162 567
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 65 1e-161 566
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 65 1e-161 566
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 65 1e-161 566
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 64 1e-161 566
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 65 1e-161 566
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 65 1e-161 566
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 65 2e-161 566
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 65 2e-161 566
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 65 1e-160 563
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 65 3e-160 562
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 64 3e-160 562
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 64 5e-160 561
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 66 9e-160 560
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 60 2e-159 559
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 64 8e-159 557
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 66 4e-158 555
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 66 6e-158 554
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 61 6e-158 554
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 66 7e-158 554
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 66 1e-157 553
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 61 1e-157 553
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 61 1e-157 553
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 61 2e-157 553
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 61 2e-157 553
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 66 2e-157 552
WERAM-Xim-0061 ENSXMAP00000005239.1 Xiphophorus maculatus 62 3e-157 552
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 65 8e-157 550
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 64 1e-156 550
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 64 2e-156 549
WERAM-Xet-0050 ENSXETP00000015978.3 Xenopus tropicalis 61 3e-156 549
WERAM-Gam-0033 ENSGMOP00000003469.1 Gadus morhua 63 4e-156 548
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 63 5e-156 548
WERAM-Orn-0136 ENSONIP00000014285.1 Oreochromis niloticus 62 5e-156 548
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 60 6e-156 548
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 64 6e-156 548
WERAM-Pof-0067 ENSPFOP00000005770.2 Poecilia formosa 63 7e-156 547
WERAM-Leo-0176 ENSLOCP00000020984.1 Lepisosteus oculatus 61 8e-156 547
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 63 8e-156 547
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 64 2e-155 546
WERAM-Fec-0156 ENSFCAP00000015379.2 Felis catus 61 6e-155 544
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 61 2e-154 543
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 63 2e-154 543
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 61 2e-154 543
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 59 2e-151 532
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 60 1e-150 530
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 58 5e-150 528
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 57 1e-148 523
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 56 5e-148 521
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 64 7e-148 521
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 57 1e-147 520
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 61 2e-147 520
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 61 2e-147 520
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 69 3e-147 519
WERAM-Ved-0020 EGY15146 Verticillium dahliae 56 4e-147 518
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 61 5e-147 518
WERAM-Coi-0024 EAS33504 Coccidioides immitis 56 1e-146 517
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 57 1e-146 517
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 56 9e-146 514
WERAM-Kop-0004 CAY67954 Komagataella pastoris 59 9e-146 514
WERAM-Trr-0017 EGR48353 Trichoderma reesei 56 1e-145 513
WERAM-Trv-0003 EHK19072 Trichoderma virens 60 3e-145 512
WERAM-Cag-0003 CAG57932 Candida glabrata 58 4e-145 511
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 58 7e-145 511
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 55 8e-145 511
WERAM-Caa-0018 KGT69072 Candida albicans 59 4e-144 508
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 55 5e-144 508
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 58 1e-143 507
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 55 1e-143 506
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 57 2e-143 506
WERAM-Mam-0073 ENSMMUP00000011716.2 Macaca mulatta 58 6e-143 504
WERAM-Asg-0034 AAS54885 Ashbya gossypii 57 1e-142 503
WERAM-Cym-0014 CMJ129CT Cyanidioschyzon merolae 59 3e-142 502
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 55 3e-142 502
Created Date 25-Jun-2016