WERAM Information

Tag Content
WERAM ID WERAM-Asm-0120
Ensembl Protein ID ENSAMXP00000012237.1
Gene Name hdac1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSAMXG00000011881.1 ENSAMXT00000012237.1 ENSAMXP00000012237.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.40e-176 586 10 321
Organism Astyanax mexicanus
Domain Profile
  HDAC Class-I
           class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89 
                           kkv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+ ee++k+hs++yi+fl++++p+n++e+sk++++fnvg
  ENSAMXP00000012237.1  10 KKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVG 98 
                           589************************************************************************************** PP
           class-1.txt  90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
                           edcPvfdglfe+cql+tG+s+++a kLnk+++diainwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea
  ENSAMXP00000012237.1  99 EDCPVFDGLFEFCQLSTGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187
                           ***************************************************************************************** PP
           class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
                           fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+ifk+++ kv+e+++P+avvlqcGaDsl+gDrlg+f
  ENSAMXP00000012237.1 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCF 275
                           *****************.*********************************************************************** PP
           class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                           nl+ikgha+cv+++ksfnlpll+lGGGGYt+rnvaRcwtyetav+l
  ENSAMXP00000012237.1 276 NLTIKGHAKCVEYMKSFNLPLLMLGGGGYTIRNVARCWTYETAVAL 321
                           *******************************************987 PP
Protein Sequence
(Fasta)		MALSSQGTKK KVCYYYDGDV GNYYYGQGHP MKPHRIRMTH NLLLNYGLYR KMEIYRPHKA 60
NGEEMTKYHS DDYIKFLRSI RPDNMSEYSK QMQRFNVGED CPVFDGLFEF CQLSTGGSVA 120
GAVKLNKQQT DIAINWAGGL HHAKKSEASG FCYVNDIVLA ILELLKYHQR VLYIDIDIHH 180
GDGVEEAFYT TDRVMTVSFH KYGEYFPGTG DLRDIGAGKG KYYAVNYPLR DGIDDESYEA 240
IFKPIMAKVM EMYQPSAVVL QCGADSLSGD RLGCFNLTIK GHAKCVEYMK SFNLPLLMLG 300
GGGYTIRNVA RCWTYETAVA LDSTIPNDIE LPYNDYFEYF GPDFKLHISP SNMTNQNTND 360
YLEKIKQRLF ENLRMLPHAP GVQMQVIPED AVQEDSGDEE DDPDKRIPIV RAHDKRIACD 420
EEFSDSEDEG QGGRRNTINF KKAKRVKTEE DKDGEEKKDV KEEEKTPEEK MDTKGPKEEL 480
KTT 483
Nucleotide Sequence
(Fasta)		GCCCCCAGAA GGATATTCTT GAGTGTGATT GGATGATGAG GCCTGATGTC CCGCCCCCGA 60
TGTGCTGCGC TGCTGAAAGC CGGCGGGCCG CACGCTGACC GGAGGGAAAA TGGCGCTGAG 120
TTCGCAAGGA ACAAAGAAGA AAGTTTGCTA TTACTATGAT GGGGATGTTG GCAATTACTA 180
CTATGGCCAG GGTCATCCCA TGAAGCCCCA CAGAATCCGC ATGACCCACA ACCTCCTCTT 240
GAACTATGGA CTGTACAGGA AGATGGAGAT CTATAGACCA CACAAAGCCA ATGGTGAAGA 300
GATGACCAAG TATCACAGTG ATGATTACAT CAAGTTCTTG CGTTCCATTC GCCCAGATAA 360
CATGTCAGAA TACAGCAAGC AGATGCAGAG ATTTAATGTG GGTGAAGACT GCCCTGTGTT 420
TGATGGCTTA TTTGAGTTCT GTCAGCTTTC AACAGGTGGC TCTGTTGCTG GAGCTGTGAA 480
ACTAAACAAG CAGCAAACAG ACATAGCCAT TAACTGGGCG GGTGGTCTTC ACCATGCCAA 540
GAAGTCTGAG GCCTCTGGTT TCTGCTACGT CAATGACATT GTCCTTGCCA TCTTGGAACT 600
GCTCAAATAC CATCAAAGAG TGCTGTATAT TGACATTGAC ATCCATCATG GTGATGGAGT 660
AGAGGAGGCC TTCTACACCA CAGACCGTGT CATGACTGTT TCTTTCCATA AATATGGAGA 720
GTACTTCCCT GGCACAGGTG ACCTCAGAGA CATTGGTGCA GGAAAGGGAA AATACTACGC 780
TGTGAACTAC CCGCTCAGGG ATGGGATTGA TGATGAATCT TATGAAGCCA TTTTCAAACC 840
TATCATGGCC AAAGTGATGG AGATGTATCA ACCCAGTGCT GTAGTACTTC AGTGCGGTGC 900
TGATTCTCTA TCTGGAGACA GATTGGGCTG CTTCAACCTC ACTATTAAAG GCCATGCTAA 960
GTGTGTTGAA TACATGAAGA GCTTTAACTT GCCTTTGTTG ATGCTGGGAG GAGGAGGATA 1020
CACCATTAGG AACGTGGCTC GCTGTTGGAC CTATGAGACA GCTGTAGCCC TGGACAGCAC 1080
TATTCCCAAC GATATAGAGC TTCCATACAA TGACTACTTC GAATATTTTG GACCGGACTT 1140
CAAGCTCCAC ATCAGCCCTT CCAACATGAC CAACCAGAAC ACAAATGACT ACCTGGAGAA 1200
GATTAAACAG CGTCTGTTTG AGAACCTGCG CATGTTGCCT CATGCTCCAG GAGTGCAAAT 1260
GCAGGTTATC CCTGAGGATG CTGTGCAGGA GGACAGTGGA GATGAGGAGG ATGATCCAGA 1320
CAAACGAATC CCCATAGTTC GTGCCCATGA CAAGCGGATA GCCTGCGATG AGGAGTTCTC 1380
CGATTCTGAG GATGAAGGAC AAGGTGGCCG CAGAAACACC ATAAACTTCA AGAAAGCAAA 1440
ACGAGTGAAG ACTGAAGAAG ACAAGGATGG GGAAGAGAAG AAAGATGTGA AGGAGGAGGA 1500
GAAAACTCCA GAGGAAAAAA TGGACACAAA GGGGCCAAAA GAAGAATTGA AAACAACCTG 1560
AGAATACACC AAGAGTCCAA ATGGATGCAT GTACTTGTCA TACACACACA CACATACACA 1620
CACCACACAC ACACACACAC ACCACACACA CACACACACA CCACACACAC ACACACACAC 1680
CACACAGACA CAATCTTAGC TCGCAGGCTA AAGACTGTAA ATTATTTTCT AAGGCTCATT 1740
TTACTATTTG TATTCCTGAT GAGCGGTATA AAGGTTTTTT GCATTACAAA TGTGAATTGC 1800
AATGTAAGAT GTACGTTTCC TTCCCCCCCC CCTTTTTGTA CTTTTGAATC CTTGCCCTTT 1860
TTTTCATTTT AAGTTGTCAA TGTCTACCAA AAGTAGCATC AGTCAAATGA GACCAGAAAC 1920
GGTAGTTAAG AGTTGGTCGT TTGCTTTCCC CACCTGGGAG ACTTCACCTC TAAGTTATTT 1980
TAAATCATGG ACTTGAATAC AAACACATAC ATGCATCACT CTCTCCCTTA TTAGGTCTTG 2040
TTTTATCTGT GGATGCTGGT TCTTGCTGCA GTGTCCTTTG CCTCATTTTA AAGAGATAAT 2100
GTTTGTTTTA ATGTCCGTGT CGATCGATGG CTTGGCTCTG AATCTCTTCC CTGGTCTGTT 2160
CTGAATATGG AGGAAGACTT GCGTTTACTG CCGTTAGACT CCAGATTCTT TCCCATTGTG 2220
GCCATGCTAG CAAGTCTGTT GCACTTCTGG CTGGATATAG CAGTATAGAG TTCCAGAGTT 2280
CAGTGGTTTT GAAATGTCCG TATTATAACA ATGCCTTTGG TAAAGTAAAT AAAGAGGATG 2340
TTCTCTCATG TCTTGTCTTT TTCCATTGCT TTCTTATTTA TTTTTTTGTA TTTTAGGATT 2400
TTGCACCAGA ACAATCAGGG TAACTAGTGC AACTTTCAAT GTTACAACAC CTTGGGACAG 2460
ATTTTAAAAT GTCATATACA TA 2483
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 97 0.0 847
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 95 0.0 808
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 96 0.0 808
WERAM-Xim-0229 ENSXMAP00000019038.1 Xiphophorus maculatus 96 0.0 806
WERAM-Pof-0034 ENSPFOP00000002952.2 Poecilia formosa 96 0.0 806
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 91 0.0 803
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 91 0.0 800
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 89 0.0 796
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 94 0.0 795
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 90 0.0 794
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 91 0.0 792
WERAM-Orn-0087 ENSONIP00000009730.1 Oreochromis niloticus 92 0.0 788
WERAM-Fia-0005 ENSFALP00000000658.1 Ficedula albicollis 92 0.0 787
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 91 0.0 787
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 94 0.0 784
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 95 0.0 783
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 91 0.0 783
WERAM-Orla-0151 ENSORLP00000017757.1 Oryzias latipes 90 0.0 782
WERAM-Myl-0035 ENSMLUP00000002835.2 Myotis lucifugus 90 0.0 782
WERAM-Ova-0099 ENSOARP00000010190.1 Ovis aries 90 0.0 782
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 90 0.0 782
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 91 0.0 782
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 92 0.0 782
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 91 0.0 782
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 91 0.0 782
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 90 0.0 781
WERAM-Chs-0191 ENSCSAP00000011772.1 Chlorocebus sabaeus 90 0.0 781
WERAM-Hos-0228 ENSP00000430432.1 Homo sapiens 90 0.0 781
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 90 0.0 781
WERAM-Orc-0004 ENSOCUP00000000521.2 Oryctolagus cuniculus 90 0.0 781
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 91 0.0 781
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 91 0.0 781
WERAM-Sus-0028 ENSSSCP00000004781.2 Sus scrofa 90 0.0 780
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 91 0.0 780
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 91 0.0 779
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 90 0.0 779
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 89 0.0 779
WERAM-Poa-0153 ENSPPYP00000018964.2 Pongo abelii 90 0.0 778
WERAM-Pat-0155 ENSPTRP00000049696.3 Pan troglodytes 90 0.0 778
WERAM-Aim-0151 ENSAMEP00000013919.1 Ailuropoda melanoleuca 90 0.0 778
WERAM-Nol-0145 ENSNLEP00000015855.1 Nomascus leucogenys 90 0.0 778
WERAM-Gog-0059 ENSGGOP00000005320.2 Gorilla gorilla 90 0.0 778
WERAM-Dan-0143 ENSDNOP00000031144.1 Dasypus novemcinctus 90 0.0 778
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 91 0.0 777
WERAM-Loa-0063 ENSLAFP00000004670.4 Loxodonta africana 90 0.0 775
WERAM-Fec-0156 ENSFCAP00000015379.2 Felis catus 90 0.0 774
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 91 0.0 773
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 91 0.0 773
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 91 0.0 770
WERAM-Eqc-0098 ENSECAP00000011591.1 Equus caballus 91 0.0 769
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 91 0.0 767
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 89 0.0 754
WERAM-Mam-0073 ENSMMUP00000011716.2 Macaca mulatta 85 0.0 717
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 80 0.0 715
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 87 0.0 713
WERAM-Dio-0132 ENSDORP00000012520.1 Dipodomys ordii 84 0.0 711
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 84 0.0 700
WERAM-Pem-0096 ENSPMAP00000010023.1 Petromyzon marinus 81 0.0 687
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 82 0.0 683
WERAM-Mim-0092 ENSMICP00000008598.1 Microcebus murinus 83 5e-179 624
WERAM-Soa-0003 ENSSARP00000000316.1 Sorex araneus 78 5e-176 614
WERAM-Mae-0030 ENSMEUP00000002192.1 Macropus eugenii 95 1e-174 610
WERAM-Tub-0143 ENSTBEP00000015305.1 Tupaia belangeri 85 6e-173 604
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 66 4e-169 592
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 61 1e-165 580
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 61 2e-164 576
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 63 2e-164 576
WERAM-Chh-0102 ENSCHOP00000011659.1 Choloepus hoffmanni 72 3e-164 575
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 68 8e-164 574
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 63 1e-163 573
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 67 3e-163 572
WERAM-Coi-0024 EAS33504 Coccidioides immitis 60 4e-163 572
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 67 2e-162 569
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 64 4e-162 568
WERAM-Ved-0020 EGY15146 Verticillium dahliae 60 5e-162 568
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 66 6e-159 558
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 64 7e-159 557
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 64 7e-159 557
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 64 1e-158 556
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 64 1e-158 556
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 63 2e-158 556
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 70 2e-158 556
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 64 2e-158 556
WERAM-Trv-0003 EHK19072 Trichoderma virens 60 2e-158 556
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 62 7e-158 554
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 64 9e-158 553
WERAM-Pug-0005 EFP76878 Puccinia graminis 63 2e-157 553
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 67 3e-157 552
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 64 4e-157 552
WERAM-Kop-0004 CAY67954 Komagataella pastoris 61 4e-157 551
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 64 6e-157 551
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 61 7e-157 551
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 69 8e-157 551
WERAM-Sei-0026 Si006243m Setaria italica 63 9e-157 550
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 63 9e-157 550
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 63 1e-156 550
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 66 1e-156 550
WERAM-Glm-0156 GLYMA13G06010.3 Glycine max 64 1e-156 550
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 62 2e-156 549
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 63 4e-156 548
WERAM-Cag-0003 CAG57932 Candida glabrata 63 5e-156 548
WERAM-Met-0084 KEH36404 Medicago truncatula 68 5e-156 548
WERAM-Caa-0018 KGT69072 Candida albicans 60 5e-156 548
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 64 6e-156 548
WERAM-Trr-0017 EGR48353 Trichoderma reesei 62 7e-156 547
WERAM-Prp-0060 EMJ10303 Prunus persica 68 9e-156 547
WERAM-Zem-0056 GRMZM2G081474_P01 Zea mays 68 4e-155 545
WERAM-Amt-0072 ERN20455 Amborella trichopoda 68 4e-155 545
WERAM-Thc-0026 EOX98961 Theobroma cacao 65 4e-155 545
WERAM-Asg-0034 AAS54885 Ashbya gossypii 62 1e-154 543
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 69 2e-154 543
WERAM-Pot-0112 POPTR_0009s17200.1 Populus trichocarpa 67 3e-154 542
WERAM-Lab-0002 EDR16061 Laccaria bicolor 61 6e-154 541
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 66 1e-153 540
WERAM-Zyt-0024 Mycgr3P51809 Zymoseptoria tritici 62 2e-153 540
WERAM-Lac-0128 ENSLACP00000015194.1 Latimeria chalumnae 68 5e-153 538
WERAM-Aet-0051 EMT16627 Aegilops tauschii 68 5e-153 538
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 68 1e-152 537
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 59 1e-152 536
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 65 2e-152 536
WERAM-Brr-0180 Bra035858.1-P Brassica rapa 67 2e-152 536
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 62 4e-152 535
WERAM-Bro-0169 Bo9g017510.1 Brassica oleracea 67 5e-152 535
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 64 1e-151 533
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 64 2e-151 533
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 67 2e-150 530
Created Date 25-Jun-2016